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Summary Expression Phenotypes Gene Literature (0) GO Terms (6) Nucleotides (158) Proteins (45) Interactants (26) Wiki
XB-GENEPAGE-5729628

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for tyw3 - Xenopus tropicalis

RefSeq mRNAs(1)
Models - Gene (29)
Models - mRNA (30)
mRNAs (5)
ESTs (19)

RefSeq mRNAs (1)

Accession Version name Length Protein Species
NM_001016428 NM_001016428.2 tRNA wybutosine-synthesizing protein 3 homolog 960 bp NP_001016428 X. tropicalis

Models - Gene (29)

Source Version Model Species
NCBI 10.0 XBXT10g018012 X. tropicalis
ENSEMBL 10.0 tyw3 X. tropicalis
Xenbase 9.1 gene4179 X. tropicalis
ENSEMBL 9.1 tyw3 X. tropicalis
JGI 8.0 Xetrov14018993m.g X. tropicalis
JGI 7.1 Xetro.D01759 X. tropicalis
ENSEMBL 4.1 ENSXETG00000002996 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_187000004 X. tropicalis
JGI 4.1 e_gw1.187.110.1 X. tropicalis
JGI 4.1 e_gw1.187.12.1 X. tropicalis
JGI 4.1 e_gw1.187.85.1 X. tropicalis
JGI 4.1 gw1.187.110.1 X. tropicalis
JGI 4.1 gw1.187.12.1 X. tropicalis
JGI 4.1 gw1.187.85.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1870009 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1870012 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1870085 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1870110 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_1870006 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1870018 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1870019 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1870003 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_187000002 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_187000003 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_187000005 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_187000006 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_187000018 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_187000019 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_187000003 X. tropicalis

mRNAs based on gene models(30)

Source Version Model Species
NCBI 10.0 mRNA088937 X. tropicalis
ENSEMBL 10.0 ENSXETT00000123850 X. tropicalis
ENSEMBL 10.0 ENSXETT00000006540 X. tropicalis
Xenbase 9.1 rna13659 X. tropicalis
ENSEMBL 9.1 ENSXETT00000006540 X. tropicalis
JGI 8.0 Xetrov14018993m X. tropicalis
JGI 7.1 Xetro.D01759.1 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_187000004 X. tropicalis
ENSEMBL 4.1 ENSXETT00000006540 X. tropicalis
JGI 4.1 e_gw1.187.110.1 X. tropicalis
JGI 4.1 e_gw1.187.12.1 X. tropicalis
JGI 4.1 e_gw1.187.85.1 X. tropicalis
JGI 4.1 gw1.187.110.1 X. tropicalis
JGI 4.1 gw1.187.12.1 X. tropicalis
JGI 4.1 gw1.187.85.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1870009 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1870012 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1870085 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1870110 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_1870006 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1870018 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1870019 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1870003 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_187000002 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_187000003 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_187000005 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_187000006 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_187000018 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_187000019 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_187000003 X. tropicalis

mRNAs from cDNA libraries (5)

Clone Accession Species Library Anatomy Stage
NM_001016428 X. tropicalis
TEgg039a22 CR761059 X. tropicalis
TEgg079i13 CR761251 X. tropicalis
IMAGE:9040337 BC171077 X. tropicalis
IMAGE:9040335 BC171075 X. tropicalis

ESTs (19)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8891817 EL864751 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
xtbs20O09 CN081871 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7597312 CX386168 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7660648 DR831725 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7464118 CV806374 5' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
xthr33I18 CN109235 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr30P03 CN107740 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr29P03 CN106538 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TGas081h03 AL777179 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas068l22 AL681222 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
L1G8f06 AL637464 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:8891817 EL864752 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
xtbs20O09 CN081870 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7597312 CX386167 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
CAAO4453 CX935577 3' X. tropicalis NIH_XGC_tropTe5 testis frog
xthr33I18 CN109234 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr30P03 CN107739 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr29P03 CN106537 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TGas068l22 BX747028 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12