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Summary Expression Phenotypes Gene Literature (0) GO Terms (4) Nucleotides (89) Proteins (41) Interactants (0) Wiki
XB-GENEPAGE-5729271

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for XB5729271 - All

RefSeq mRNAs(1)
Models - Gene (21)
Models - mRNA (30)
mRNAs (8)
ESTs (13)

RefSeq mRNAs (1)

Accession Version name Length Protein Species
NM_001102750 NM_001102750.1 novel C3HC4 type (RING finger) and B-box zinc finger protein with SPRY domain 2771 bp NP_001096220 X. tropicalis

Models - Gene (21)

Source Version Model Species
NCBI 10.0 XBXT10g012236 X. tropicalis
ENSEMBL 10.0 XB5729271 [provisional] X. tropicalis
Xenbase 9.1 gene4665 X. tropicalis
ENSEMBL 9.1 XB5729271 X. tropicalis
JGI 7.1 Xetro.A03256 X. tropicalis
ENSEMBL 4.1 ENSXETG00000026378 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_237000001 X. tropicalis
JGI 4.1 e_gw1.237.112.1 X. tropicalis
JGI 4.1 e_gw1.237.113.1 X. tropicalis
JGI 4.1 e_gw1.237.114.1 X. tropicalis
JGI 4.1 gw1.237.112.1 X. tropicalis
JGI 4.1 gw1.237.113.1 X. tropicalis
JGI 4.1 gw1.237.114.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_2370004 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2370112 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2370113 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2370114 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2370005 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_2370002 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_237000005 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_237000002 X. tropicalis

mRNAs based on gene models(30)

Source Version Model Species
NCBI 10.0 mRNA060608 X. tropicalis
ENSEMBL 10.0 ENSXETT00000123522 X. tropicalis
ENSEMBL 10.0 ENSXETT00000114836 X. tropicalis
ENSEMBL 10.0 ENSXETT00000118272 X. tropicalis
ENSEMBL 10.0 ENSXETT00000116855 X. tropicalis
ENSEMBL 10.0 ENSXETT00000119109 X. tropicalis
ENSEMBL 10.0 ENSXETT00000006971 X. tropicalis
ENSEMBL 10.0 ENSXETT00000121961 X. tropicalis
Xenbase 9.1 rna15180 X. tropicalis
ENSEMBL 9.1 ENSXETT00000006971 X. tropicalis
JGI 7.1 Xetro.A03256.4 X. tropicalis
JGI 7.1 Xetro.A03256.2 X. tropicalis
JGI 7.1 Xetro.A03256.3 X. tropicalis
JGI 7.1 Xetro.A03256.1 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_237000001 X. tropicalis
ENSEMBL 4.1 ENSXETT00000006971 X. tropicalis
JGI 4.1 e_gw1.237.112.1 X. tropicalis
JGI 4.1 e_gw1.237.113.1 X. tropicalis
JGI 4.1 e_gw1.237.114.1 X. tropicalis
JGI 4.1 gw1.237.112.1 X. tropicalis
JGI 4.1 gw1.237.113.1 X. tropicalis
JGI 4.1 gw1.237.114.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_2370004 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2370112 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2370113 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2370114 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2370005 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_2370002 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_237000005 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_237000002 X. tropicalis

mRNAs from cDNA libraries (8)

Clone Accession Species Library Anatomy Stage
TNeu058i17 CR855400 X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
NM_001102750 X. tropicalis
XM_018092990 X. tropicalis
XM_018092945 X. tropicalis
XM_012962313 X. tropicalis
XM_012962286 X. tropicalis
XM_012962262 X. tropicalis
XM_031899479 X. tropicalis

ESTs (13)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7541073 CX462501 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7571821 CX513071 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7692510 CX918526 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7520218 CX480884 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7622657 CX371318 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TGas106n11 AL958959 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu058i17 AL679637 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu050l12 AL661958 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:4439899 BG348581 5' X. tropicalis Wellcome CRC pCS107 tropicalis St10-12 whole organism NF stage 10 to NF stage 12
IMAGE:7622657 DR899003 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7571821 DR889714 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas106n11 BX754350 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:4439899 BG348747 3' X. tropicalis Wellcome CRC pCS107 tropicalis St10-12 whole organism NF stage 10 to NF stage 12