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Summary Expression Phenotypes Gene Literature (10) GO Terms (3) Nucleotides (418) Proteins (137) Interactants (59) Wiki
XB-GENEPAGE-495324

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for ptprf - Xenopus laevis

RefSeq mRNAs(38)
Models - Gene (8)
Models - mRNA (8)
mRNAs (39)
ESTs (50)

RefSeq mRNAs (38)

Accession Version name Length Protein Species
XM_041561419 XM_041561419.1 XP_041417353.1 receptor-type tyrosine-protein phosphatase F isoform X1 7853 bp XP_041417353 X. laevis.S
XM_041589206 XM_041589206.1 XP_041445140.1 protein tyrosine phosphatase receptor type F L homeolog isoform X17 7613 bp XP_041445140 X. laevis.L
XM_041589207 XM_041589207.1 XP_041445141.1 protein tyrosine phosphatase receptor type F L homeolog isoform X18 7593 bp XP_041445141 X. laevis.L
XM_041589208 XM_041589208.1 XP_041445142.1 protein tyrosine phosphatase receptor type F L homeolog isoform X19 7892 bp XP_041445142 X. laevis.L
XM_018260800 XM_018260800.2 receptor-type tyrosine-protein phosphatase F isoform X8 7790 bp XP_018116289 X. laevis.S
XM_018260802 XM_018260802.2 receptor-type tyrosine-protein phosphatase F isoform X10 7763 bp XP_018116291 X. laevis.S
XM_018256535 XM_018256535.2 protein tyrosine phosphatase receptor type F L homeolog isoform X12 7864 bp XP_018112024 X. laevis.L
XM_018256537 XM_018256537.2 protein tyrosine phosphatase receptor type F L homeolog isoform X13 7838 bp XP_018112026 X. laevis.L
NM_001088518 NM_001088518.1 protein tyrosine phosphatase receptor type F L homeolog precursor 7297 bp NP_001081987 X. laevis.L
XM_041589199 XM_041589199.1 XP_041445133.1 protein tyrosine phosphatase receptor type F L homeolog isoform X8 7912 bp XP_041445133 X. laevis.L
XM_041589200 XM_041589200.1 XP_041445134.1 protein tyrosine phosphatase receptor type F L homeolog isoform X9 7899 bp XP_041445134 X. laevis.L
XM_041589201 XM_041589201.1 XP_041445135.1 protein tyrosine phosphatase receptor type F L homeolog isoform X10 7886 bp XP_041445135 X. laevis.L
XM_041589202 XM_041589202.1 XP_041445136.1 protein tyrosine phosphatase receptor type F L homeolog isoform X11 7872 bp XP_041445136 X. laevis.L
XM_041589203 XM_041589203.1 XP_041445137.1 protein tyrosine phosphatase receptor type F L homeolog isoform X14 7642 bp XP_041445137 X. laevis.L
XM_041589204 XM_041589204.1 XP_041445138.1 protein tyrosine phosphatase receptor type F L homeolog isoform X15 7615 bp XP_041445138 X. laevis.L
XM_041589205 XM_041589205.1 XP_041445139.1 protein tyrosine phosphatase receptor type F L homeolog isoform X16 7581 bp XP_041445139 X. laevis.L
XM_041589192 XM_041589192.1 XP_041445126.1 protein tyrosine phosphatase receptor type F L homeolog isoform X1 7750 bp XP_041445126 X. laevis.L
XM_041589193 XM_041589193.1 XP_041445127.1 protein tyrosine phosphatase receptor type F L homeolog isoform X2 7947 bp XP_041445127 X. laevis.L
XM_041589194 XM_041589194.1 XP_041445128.1 protein tyrosine phosphatase receptor type F L homeolog isoform X3 7933 bp XP_041445128 X. laevis.L
XM_041589195 XM_041589195.1 XP_041445129.1 protein tyrosine phosphatase receptor type F L homeolog isoform X4 7933 bp XP_041445129 X. laevis.L
XM_041589196 XM_041589196.1 XP_041445130.1 protein tyrosine phosphatase receptor type F L homeolog isoform X5 7927 bp XP_041445130 X. laevis.L
XM_041589197 XM_041589197.1 XP_041445131.1 protein tyrosine phosphatase receptor type F L homeolog isoform X6 7921 bp XP_041445131 X. laevis.L
XM_041589198 XM_041589198.1 XP_041445132.1 protein tyrosine phosphatase receptor type F L homeolog isoform X7 7913 bp XP_041445132 X. laevis.L
XM_041561429 XM_041561429.1 XP_041417363.1 receptor-type tyrosine-protein phosphatase F isoform X11 7548 bp XP_041417363 X. laevis.S
XM_041561431 XM_041561431.1 XP_041417365.1 receptor-type tyrosine-protein phosphatase F isoform X12 7529 bp XP_041417365 X. laevis.S
XM_041561432 XM_041561432.1 XP_041417366.1 receptor-type tyrosine-protein phosphatase F isoform X13 7502 bp XP_041417366 X. laevis.S
XM_041561433 XM_041561433.1 XP_041417367.1 receptor-type tyrosine-protein phosphatase F isoform X14 7457 bp XP_041417367 X. laevis.S
XM_041561434 XM_041561434.1 XP_041417368.1 receptor-type tyrosine-protein phosphatase F isoform X15 7535 bp XP_041417368 X. laevis.S
XM_041561435 XM_041561435.1 XP_041417369.1 receptor-type tyrosine-protein phosphatase F isoform X16 7517 bp XP_041417369 X. laevis.S
XM_041589191 XM_041589191.1 XP_041445125.1 protein tyrosine phosphatase receptor type F L homeolog isoform X1 7947 bp XP_041445125 X. laevis.L
XM_041561420 XM_041561420.1 XP_041417354.1 receptor-type tyrosine-protein phosphatase F isoform X1 7361 bp XP_041417354 X. laevis.S
XM_041561422 XM_041561422.1 XP_041417356.1 receptor-type tyrosine-protein phosphatase F isoform X2 7841 bp XP_041417356 X. laevis.S
XM_041561423 XM_041561423.1 XP_041417357.1 receptor-type tyrosine-protein phosphatase F isoform X3 7835 bp XP_041417357 X. laevis.S
XM_041561424 XM_041561424.1 XP_041417358.1 receptor-type tyrosine-protein phosphatase F isoform X4 7827 bp XP_041417358 X. laevis.S
XM_041561425 XM_041561425.1 XP_041417359.1 receptor-type tyrosine-protein phosphatase F isoform X5 7820 bp XP_041417359 X. laevis.S
XM_041561426 XM_041561426.1 XP_041417360.1 receptor-type tyrosine-protein phosphatase F isoform X6 7808 bp XP_041417360 X. laevis.S
XM_041561427 XM_041561427.1 XP_041417361.1 receptor-type tyrosine-protein phosphatase F isoform X7 7808 bp XP_041417361 X. laevis.S
XM_041561428 XM_041561428.1 XP_041417362.1 receptor-type tyrosine-protein phosphatase F isoform X9 7781 bp XP_041417362 X. laevis.S

Models - Gene (8)

Source Version Model Species
NCBI 10.1 XBXL10_1g19122 X. laevis.L
NCBI 10.1 XBXL10_1g21604 X. laevis.S
JGI 9.1 Xelaev18023058m.g X. laevis.L
JGI 9.1 Xelaev18025168m.g X. laevis.S
Xenbase 9.2 gene43485 X. laevis.L
Xenbase 9.2 gene19389 X. laevis.S
JGI 7.2 Xelaev16068433m.g X. laevis.L
JGI 6.0 XeXenL6RMv10012170m.g X. laevis.L

mRNAs based on gene models(8)

Source Version Model Species
NCBI 10.1 XBmRNA35332 X. laevis.L
NCBI 10.1 XBmRNA40063 X. laevis.S
JGI 9.1 Xelaev18023058m X. laevis.L
JGI 9.1 Xelaev18025168m X. laevis.S
Xenbase 9.2 rna86912 X. laevis.L
Xenbase 9.2 rna56658 X. laevis.S
JGI 7.2 Xelaev16068433m X. laevis.L
JGI 6.0 XeXenL6RMv10012170m X. laevis.L

mRNAs from cDNA libraries (39)

Clone Accession Species Library Anatomy Stage
AF197945 X. laevis.L
NM_001088518 X. laevis.L
XM_018256537 X. laevis.L
XM_018256535 X. laevis.L
XM_018260802 X. laevis.S
XM_018260800 X. laevis.S
XM_041589208 X. laevis.L
XM_041589207 X. laevis.L
XM_041589206 X. laevis.L
XM_041589205 X. laevis.L
XM_041589204 X. laevis.L
XM_041589203 X. laevis.L
XM_041589202 X. laevis.L
XM_041589201 X. laevis.L
XM_041589200 X. laevis.L
XM_041589199 X. laevis.L
XM_041589198 X. laevis.L
XM_041589197 X. laevis.L
XM_041589196 X. laevis.L
XM_041589195 X. laevis.L
XM_041589194 X. laevis.L
XM_041589193 X. laevis.L
XM_041589192 X. laevis.L
XM_041589191 X. laevis.L
XM_041561435 X. laevis.S
XM_041561434 X. laevis.S
XM_041561433 X. laevis.S
XM_041561432 X. laevis.S
XM_041561431 X. laevis.S
XM_041561429 X. laevis.S
XM_041561428 X. laevis.S
XM_041561427 X. laevis.S
XM_041561426 X. laevis.S
XM_041561425 X. laevis.S
XM_041561424 X. laevis.S
XM_041561423 X. laevis.S
XM_041561422 X. laevis.S
XM_041561420 X. laevis.S
XM_041561419 X. laevis.S

ESTs (50)

Clone Accession 5'/3' Species Library Anatomy Stage
xl327m05 DC131374 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xlk110i05ex DC038999 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:8534014 EB468898 5' X. laevis.L NICHD_XGC_limb_m limb NF stage 54 to NF stage 61
IMAGE:8320388 DY560132 5' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:8318466 DY556404 5' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:7983016 DR724856 5' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:7297781 CO384617 5' X. laevis.L Blumberg_Cho dorsal blastopore lip upper blastopore lip NF stage 7 to NF stage 9
XL101l22 BJ074351 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL053p07 BJ069602 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL059j20 BJ058508 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL089c01 BJ067067 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL083i05 BJ065589 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL058p17 BJ058337 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL085e11 BJ066146 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL079j09 BJ064435 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL078p23 BJ064304 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL070b08 BJ063083 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL006p04 BJ031367 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:4970796 CF289833 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:4970796 CF289832 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:6877952 CB180011 5' X. laevis.L NICHD_XGC_Tad1 whole organism NF stage 54 to prometamorphosis stage
IMAGE:6866210 CA794008 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:5155635 CA792764 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:5161850 CA791314 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:5161830 CA791300 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:3431003 BF611116 5' X. laevis.L Wellcome CRC pcDNAI egg egg unfertilized egg stage
IMAGE:3401768 BE679418 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
PBX0150C06 AW645292 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
PBX0131G06 AW643700 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
PBX0126G03 AW643254 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
PBX0120F10 AW642709 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
PBX0116A10 AW642208 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
PBX0058E12 AW637438 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
za49f01 AW158956 5' X. laevis.L Xenopus EST library brain NF stage 45 to NF stage 66
rxl327m05 DC095462 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxlk110i05ex DC006059 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:7983016 DR724895 3' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
XL101l22 BJ091774 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL053p07 BJ086726 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL089c01 BJ084410 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL085e11 BJ083471 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL083i05 BJ082925 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL079j09 BJ082272 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL070b08 BJ080998 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL073o19 BJ079918 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL058p17 BJ076856 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL006p04 BJ046300 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:6877952 CB560932 3' X. laevis.L NICHD_XGC_Tad1 whole organism NF stage 54 to prometamorphosis stage
IMAGE:3431003 BF611050 3' X. laevis.L Wellcome CRC pcDNAI egg egg unfertilized egg stage
IMAGE:3401768 BE576005 3' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10