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Summary Expression Phenotypes Gene Literature (10) GO Terms (3) Nucleotides (418) Proteins (137) Interactants (59) Wiki
XB-GENEPAGE-495324

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for ptprf - Xenopus tropicalis

RefSeq mRNAs(17)
Models - Gene (24)
Models - mRNA (40)
mRNAs (17)
ESTs (89)

RefSeq mRNAs (17)

Accession Version name Length Protein Species
XM_031900922 XM_031900922.1 XP_031756782.1 receptor-type tyrosine-protein phosphatase F isoform X1 7900 bp XP_031756782 X. tropicalis
XM_031900931 XM_031900931.1 XP_031756791.1 receptor-type tyrosine-protein phosphatase F isoform X11 7594 bp XP_031756791 X. tropicalis
XM_031900932 XM_031900932.1 XP_031756792.1 receptor-type tyrosine-protein phosphatase F isoform X12 7576 bp XP_031756792 X. tropicalis
XM_031900933 XM_031900933.1 XP_031756793.1 receptor-type tyrosine-protein phosphatase F isoform X13 7549 bp XP_031756793 X. tropicalis
XM_031900934 XM_031900934.1 XP_031756794.1 receptor-type tyrosine-protein phosphatase F isoform X14 7504 bp XP_031756794 X. tropicalis
XM_031900935 XM_031900935.1 XP_031756795.1 receptor-type tyrosine-protein phosphatase F isoform X15 7582 bp XP_031756795 X. tropicalis
XM_031900936 XM_031900936.1 XP_031756796.1 receptor-type tyrosine-protein phosphatase F isoform X16 7564 bp XP_031756796 X. tropicalis
XM_004913961 XM_004913961.2 receptor-type tyrosine-protein phosphatase F isoform X8 7837 bp XP_004914018 X. tropicalis
XM_004913963 XM_004913963.2 receptor-type tyrosine-protein phosphatase F isoform X10 7810 bp XP_004914020 X. tropicalis
XM_031900923 XM_031900923.1 XP_031756783.1 receptor-type tyrosine-protein phosphatase F isoform X1 7758 bp XP_031756783 X. tropicalis
XM_031900924 XM_031900924.1 XP_031756784.1 receptor-type tyrosine-protein phosphatase F isoform X2 7888 bp XP_031756784 X. tropicalis
XM_031900925 XM_031900925.1 XP_031756785.1 receptor-type tyrosine-protein phosphatase F isoform X3 7882 bp XP_031756785 X. tropicalis
XM_031900926 XM_031900926.1 XP_031756786.1 receptor-type tyrosine-protein phosphatase F isoform X4 7873 bp XP_031756786 X. tropicalis
XM_031900927 XM_031900927.1 XP_031756787.1 receptor-type tyrosine-protein phosphatase F isoform X5 7867 bp XP_031756787 X. tropicalis
XM_031900928 XM_031900928.1 XP_031756788.1 receptor-type tyrosine-protein phosphatase F isoform X6 7855 bp XP_031756788 X. tropicalis
XM_031900929 XM_031900929.1 XP_031756789.1 receptor-type tyrosine-protein phosphatase F isoform X7 7855 bp XP_031756789 X. tropicalis
XM_031900930 XM_031900930.1 XP_031756790.1 receptor-type tyrosine-protein phosphatase F isoform X9 7828 bp XP_031756790 X. tropicalis

Models - Gene (24)

Source Version Model Species
NCBI 10.0 XBXT10g005051 X. tropicalis
ENSEMBL 10.0 ptprf X. tropicalis
Xenbase 9.1 gene21623 X. tropicalis
ENSEMBL 9.1 ptprf X. tropicalis
JGI 8.0 Xetrov14017398m.g X. tropicalis
JGI 7.1 Xetro.D01871 X. tropicalis
ENSEMBL 4.1 ENSXETG00000002257 X. tropicalis
JGI 4.1 C_scaffold_4000014 X. tropicalis
JGI 4.1 e_gw1.4.256.1 X. tropicalis
JGI 4.1 e_gw1.4.291.1 X. tropicalis
JGI 4.1 e_gw1.4.292.1 X. tropicalis
JGI 4.1 gw1.4.256.1 X. tropicalis
JGI 4.1 gw1.4.291.1 X. tropicalis
JGI 4.1 gw1.4.292.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_40024 X. tropicalis
JGI 4.1 estExt_Genewise1.C_40256 X. tropicalis
JGI 4.1 estExt_Genewise1.C_40291 X. tropicalis
JGI 4.1 estExt_Genewise1.C_40292 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_40039 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_40015 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_4000040 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_4000041 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_4000043 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_4000015 X. tropicalis

mRNAs based on gene models(40)

Source Version Model Species
NCBI 10.0 mRNA025072 X. tropicalis
ENSEMBL 10.0 ENSXETT00000085133 X. tropicalis
ENSEMBL 10.0 ENSXETT00000102438 X. tropicalis
ENSEMBL 10.0 ENSXETT00000067826 X. tropicalis
ENSEMBL 10.0 ENSXETT00000091680 X. tropicalis
ENSEMBL 10.0 ENSXETT00000077100 X. tropicalis
ENSEMBL 10.0 ENSXETT00000004794 X. tropicalis
Xenbase 9.1 rna44181 X. tropicalis
ENSEMBL 9.1 ENSXETT00000066968 X. tropicalis
ENSEMBL 9.1 ENSXETT00000076671 X. tropicalis
ENSEMBL 9.1 ENSXETT00000091680 X. tropicalis
ENSEMBL 9.1 ENSXETT00000077100 X. tropicalis
ENSEMBL 9.1 ENSXETT00000004794 X. tropicalis
ENSEMBL 9.1 ENSXETT00000080372 X. tropicalis
ENSEMBL 9.1 ENSXETT00000075096 X. tropicalis
ENSEMBL 9.1 ENSXETT00000067826 X. tropicalis
ENSEMBL 9.1 ENSXETT00000085133 X. tropicalis
ENSEMBL 9.1 ENSXETT00000102438 X. tropicalis
JGI 8.0 Xetrov14017398m X. tropicalis
JGI 7.1 Xetro.D01871.2 X. tropicalis
JGI 7.1 Xetro.D01871.3 X. tropicalis
JGI 7.1 Xetro.D01871.1 X. tropicalis
JGI 4.1 C_scaffold_4000014 X. tropicalis
ENSEMBL 4.1 ENSXETT00000004794 X. tropicalis
JGI 4.1 e_gw1.4.256.1 X. tropicalis
JGI 4.1 e_gw1.4.291.1 X. tropicalis
JGI 4.1 e_gw1.4.292.1 X. tropicalis
JGI 4.1 gw1.4.256.1 X. tropicalis
JGI 4.1 gw1.4.291.1 X. tropicalis
JGI 4.1 gw1.4.292.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_40024 X. tropicalis
JGI 4.1 estExt_Genewise1.C_40256 X. tropicalis
JGI 4.1 estExt_Genewise1.C_40291 X. tropicalis
JGI 4.1 estExt_Genewise1.C_40292 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_40039 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_40015 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_4000040 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_4000041 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_4000043 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_4000015 X. tropicalis

mRNAs from cDNA libraries (17)

Clone Accession Species Library Anatomy Stage
XM_004913963 X. tropicalis
XM_004913961 X. tropicalis
XM_031900936 X. tropicalis
XM_031900935 X. tropicalis
XM_031900934 X. tropicalis
XM_031900933 X. tropicalis
XM_031900932 X. tropicalis
XM_031900931 X. tropicalis
XM_031900930 X. tropicalis
XM_031900929 X. tropicalis
XM_031900928 X. tropicalis
XM_031900927 X. tropicalis
XM_031900926 X. tropicalis
XM_031900925 X. tropicalis
XM_031900924 X. tropicalis
XM_031900923 X. tropicalis
XM_031900922 X. tropicalis

ESTs (89)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8882800 EL838454 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8922238 EL836626 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8919982 EL833874 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8857908 EL821721 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
xtbs33E04 CN090369 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:8944869 EG651805 5' X. tropicalis NICHD_XGC_tropInt_54 intestine frog
IMAGE:8943877 EG651227 5' X. tropicalis NICHD_XGC_tropInt_54 intestine frog
XZT11652 CX311983 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7633903 CX375378 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
CAAN11911 CX928161 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7533611 CX427457 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7570724 CX455506 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7555910 CX503690 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7791205 DR905687 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7803630 DR838621 5' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7714882 CX974622 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7709490 CX965123 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7696275 CX925488 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7691165 CX916029 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7688872 CX912180 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7686829 CX908422 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7658181 CX836790 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7654817 CX824289 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7651342 CX812823 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7651193 CX812445 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7646534 CX804618 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7646528 CX804572 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7642879 CX797403 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7642381 CX796930 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7518575 CX750124 5' X. tropicalis NIH_XGC_tropNeu5 whole organism NF stage 14 to NF stage 18
THdA023c22 CR570840 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA014c03 CR566067 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTbA076j08 CR441501 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA031f09 CR438883 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA024d16 CR420735 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
xthr04N15 CN120469 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr25B15 CN104233 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr25A16 CN104103 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr14D08 CN098515 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TGas086p20 AL969491 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas018e06 AL629455 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTpA058o03 BX734356 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA009a07 BX709115 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TGas020g20 AL632864 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas055j06 AL672742 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:6977978 CF216580 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:5309123 BQ392037 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:5308767 BQ391686 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:8882800 EL838455 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8922238 EL836627 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8919982 EL833875 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8857908 EL821722 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
xtbs33E04 CN090368 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
XZT11652 CX311982 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
CAAN11911 CX928160 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7691165 CX916028 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7688872 CX912179 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7686829 CX908421 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7654817 CX824288 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7646534 CX804617 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7646528 CX804571 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7518575 CX750123 3' X. tropicalis NIH_XGC_tropNeu5 whole organism NF stage 14 to NF stage 18
IMAGE:7803630 DR838620 3' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7709490 CX965122 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7696275 CX925487 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7658181 CX836789 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7651342 CX812822 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7651193 CX812444 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7642879 CX797402 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7642381 CX796929 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7555910 CX503689 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7570724 CX455505 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7533611 CX427456 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7531714 CX421960 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7633903 CX375377 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
THdA023c22 CR570841 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA014c03 CR566068 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTbA076j08 CR441502 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA031f09 CR438884 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA024d16 CR420736 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
xthr25B15 CN104232 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr25A16 CN104102 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr14D08 CN098514 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TGas086p20 BX752775 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTpA058o03 BX734357 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA011e12 BX704680 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:6977978 CF216579 3' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:5309123 BQ392036 3' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:5308767 BQ391685 3' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13