Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Phenotypes Gene Literature (2) GO Terms (5) Nucleotides (155) Proteins (106) Interactants (190) Wiki
XB-GENEPAGE-494721

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for sh3pxd2a - All

RefSeq mRNAs(15)
Models - Gene (36)
Models - mRNA (50)
mRNAs (26)
ESTs (8)

RefSeq mRNAs (15)

Accession Version name Length Protein Species
XM_041568668 XM_041568668.1 XP_041424602.1 SH3 and PX domain-containing protein 2A isoform X7 3947 bp XP_041424602 X. laevis.L
XM_041570931 XM_041570931.1 XP_041426865.1 SH3 and PX domain-containing protein 2A isoform X1 7125 bp XP_041426865 X. laevis.S
XM_041570932 XM_041570932.1 XP_041426866.1 SH3 and PX domain-containing protein 2A isoform X2 7123 bp XP_041426866 X. laevis.S
XM_041570933 XM_041570933.1 XP_041426867.1 SH3 and PX domain-containing protein 2A isoform X3 7107 bp XP_041426867 X. laevis.S
XM_041570934 XM_041570934.1 XP_041426868.1 SH3 and PX domain-containing protein 2A isoform X4 7079 bp XP_041426868 X. laevis.S
XM_041570935 XM_041570935.1 XP_041426869.1 SH3 and PX domain-containing protein 2A isoform X5 7061 bp XP_041426869 X. laevis.S
XM_041570936 XM_041570936.1 XP_041426870.1 SH3 and PX domain-containing protein 2A isoform X7 7041 bp XP_041426870 X. laevis.S
XM_041570938 XM_041570938.1 XP_041426872.1 SH3 and PX domain-containing protein 2A isoform X9 6994 bp XP_041426872 X. laevis.S
XM_041570939 XM_041570939.1 XP_041426873.1 SH3 and PX domain-containing protein 2A isoform X10 6976 bp XP_041426873 X. laevis.S
XM_041570940 XM_041570940.1 XP_041426874.1 SH3 and PX domain-containing protein 2A isoform X11 5904 bp XP_041426874 X. laevis.S
XM_041568663 XM_041568663.1 XP_041424597.1 SH3 and PX domain-containing protein 2A isoform X1 4857 bp XP_041424597 X. laevis.L
XM_041568664 XM_041568664.1 XP_041424598.1 SH3 and PX domain-containing protein 2A isoform X2 4839 bp XP_041424598 X. laevis.L
XM_041568665 XM_041568665.1 XP_041424599.1 SH3 and PX domain-containing protein 2A isoform X3 5025 bp XP_041424599 X. laevis.L
XM_041568666 XM_041568666.1 XP_041424600.1 SH3 and PX domain-containing protein 2A isoform X5 4773 bp XP_041424600 X. laevis.L
XM_041568667 XM_041568667.1 XP_041424601.1 SH3 and PX domain-containing protein 2A isoform X6 4754 bp XP_041424601 X. laevis.L

Models - Gene (36)

Source Version Model Species
NCBI 10.0 XBXT10g008055 X. tropicalis
NCBI 10.1 XBXL10_1g30351 X. laevis.L
NCBI 10.1 XBXL10_1g32617 X. laevis.S
ENSEMBL 10.0 sh3pxd2a X. tropicalis
JGI 9.1 Xelaev18034632m.g X. laevis.L
JGI 9.1 Xelaev18036911m.g X. laevis.S
Xenbase 9.1 gene29214 X. tropicalis
Xenbase 9.2 gene43087 X. laevis.L
Xenbase 9.2 gene15296 X. laevis.S
ENSEMBL 9.1 sh3pxd2a X. tropicalis
JGI 7.1 Xetro.G00488 X. tropicalis
JGI 6.0 XeXenL6RMv10026308m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000011399 X. tropicalis
JGI 4.1 C_scaffold_240000008 X. tropicalis
JGI 4.1 e_gw1.240.116.1 X. tropicalis
JGI 4.1 e_gw1.240.117.1 X. tropicalis
JGI 4.1 e_gw1.240.120.1 X. tropicalis
JGI 4.1 e_gw1.240.125.1 X. tropicalis
JGI 4.1 e_gw1.240.42.1 X. tropicalis
JGI 4.1 e_gw1.240.60.1 X. tropicalis
JGI 4.1 e_gw1.240.71.1 X. tropicalis
JGI 4.1 gw1.240.120.1 X. tropicalis
JGI 4.1 gw1.240.125.1 X. tropicalis
JGI 4.1 gw1.240.42.1 X. tropicalis
JGI 4.1 gw1.240.116.1 X. tropicalis
JGI 4.1 gw1.240.117.1 X. tropicalis
JGI 4.1 gw1.240.60.1 X. tropicalis
JGI 4.1 gw1.240.71.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_2400012 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2400071 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2400116 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2400117 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2400014 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_2400005 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_240000014 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_240000005 X. tropicalis

mRNAs based on gene models(50)

Source Version Model Species
NCBI 10.0 mRNA040006 X. tropicalis
NCBI 10.1 XBmRNA57180 X. laevis.L
NCBI 10.1 XBmRNA61569 X. laevis.S
ENSEMBL 10.0 ENSXETT00000109669 X. tropicalis
ENSEMBL 10.0 ENSXETT00000105814 X. tropicalis
ENSEMBL 10.0 ENSXETT00000121198 X. tropicalis
ENSEMBL 10.0 ENSXETT00000119665 X. tropicalis
ENSEMBL 10.0 ENSXETT00000114053 X. tropicalis
ENSEMBL 10.0 ENSXETT00000024886 X. tropicalis
JGI 9.1 Xelaev18034632m X. laevis.L
JGI 9.1 Xelaev18036911m X. laevis.S
Xenbase 9.1 rna56291 X. tropicalis
Xenbase 9.2 rna86298 X. laevis.L
Xenbase 9.2 rna44653 X. laevis.S
ENSEMBL 9.1 ENSXETT00000104120 X. tropicalis
ENSEMBL 9.1 ENSXETT00000069990 X. tropicalis
ENSEMBL 9.1 ENSXETT00000102872 X. tropicalis
ENSEMBL 9.1 ENSXETT00000086638 X. tropicalis
ENSEMBL 9.1 ENSXETT00000089231 X. tropicalis
ENSEMBL 9.1 ENSXETT00000024886 X. tropicalis
JGI 7.1 Xetro.G00488.3 X. tropicalis
JGI 7.1 Xetro.G00488.2 X. tropicalis
JGI 7.1 Xetro.G00488.1 X. tropicalis
JGI 6.0 XeXenL6RMv10026308m X. laevis.L
JGI 4.1 C_scaffold_240000008 X. tropicalis
ENSEMBL 4.1 ENSXETT00000024887 X. tropicalis
ENSEMBL 4.1 ENSXETT00000024886 X. tropicalis
ENSEMBL 4.1 ENSXETT00000024885 X. tropicalis
JGI 4.1 e_gw1.240.116.1 X. tropicalis
JGI 4.1 e_gw1.240.117.1 X. tropicalis
JGI 4.1 e_gw1.240.120.1 X. tropicalis
JGI 4.1 e_gw1.240.125.1 X. tropicalis
JGI 4.1 e_gw1.240.42.1 X. tropicalis
JGI 4.1 e_gw1.240.60.1 X. tropicalis
JGI 4.1 e_gw1.240.71.1 X. tropicalis
JGI 4.1 gw1.240.120.1 X. tropicalis
JGI 4.1 gw1.240.125.1 X. tropicalis
JGI 4.1 gw1.240.42.1 X. tropicalis
JGI 4.1 gw1.240.116.1 X. tropicalis
JGI 4.1 gw1.240.117.1 X. tropicalis
JGI 4.1 gw1.240.60.1 X. tropicalis
JGI 4.1 gw1.240.71.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_2400012 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2400071 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2400116 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2400117 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2400014 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_2400005 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_240000014 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_240000005 X. tropicalis

mRNAs from cDNA libraries (26)

Clone Accession Species Library Anatomy Stage
XM_002936804 X. tropicalis
XM_004915849 X. tropicalis
XM_004915848 X. tropicalis
XM_031906001 X. tropicalis
XM_031906000 X. tropicalis
XM_031905999 X. tropicalis
XM_031905998 X. tropicalis
XM_031905997 X. tropicalis
XM_018227425 X. laevis.S
XM_018227424 X. laevis.S
XM_018225223 X. laevis.L
XM_041570940 X. laevis.S
XM_041570939 X. laevis.S
XM_041570938 X. laevis.S
XM_041570936 X. laevis.S
XM_041570935 X. laevis.S
XM_041570934 X. laevis.S
XM_041570933 X. laevis.S
XM_041570932 X. laevis.S
XM_041570931 X. laevis.S
XM_041568668 X. laevis.L
XM_041568667 X. laevis.L
XM_041568666 X. laevis.L
XM_041568665 X. laevis.L
XM_041568664 X. laevis.L
XM_041568663 X. laevis.L

ESTs (8)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7627253 CX380722 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7533952 CX427813 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
xthr30L07 CN107702 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TGas027b06 AL647490 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7533952 CX427812 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7627253 CX380721 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
xthr30L07 CN107701 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
XL048k01 BJ039152 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15