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XB-GENEPAGE-494721
Nucleotide sequences for sh3pxd2a - All
RefSeq mRNAs(15) |
Models - Gene (36) |
Models - mRNA (50) |
mRNAs (26) |
ESTs (8) |
RefSeq mRNAs (15)
Accession | Version | name | Length | Protein | Species |
XM_041568668 | XM_041568668.1 | XP_041424602.1 SH3 and PX domain-containing protein 2A isoform X7 | 3947 bp | XP_041424602 | X. laevis.L |
XM_041570931 | XM_041570931.1 | XP_041426865.1 SH3 and PX domain-containing protein 2A isoform X1 | 7125 bp | XP_041426865 | X. laevis.S |
XM_041570932 | XM_041570932.1 | XP_041426866.1 SH3 and PX domain-containing protein 2A isoform X2 | 7123 bp | XP_041426866 | X. laevis.S |
XM_041570933 | XM_041570933.1 | XP_041426867.1 SH3 and PX domain-containing protein 2A isoform X3 | 7107 bp | XP_041426867 | X. laevis.S |
XM_041570934 | XM_041570934.1 | XP_041426868.1 SH3 and PX domain-containing protein 2A isoform X4 | 7079 bp | XP_041426868 | X. laevis.S |
XM_041570935 | XM_041570935.1 | XP_041426869.1 SH3 and PX domain-containing protein 2A isoform X5 | 7061 bp | XP_041426869 | X. laevis.S |
XM_041570936 | XM_041570936.1 | XP_041426870.1 SH3 and PX domain-containing protein 2A isoform X7 | 7041 bp | XP_041426870 | X. laevis.S |
XM_041570938 | XM_041570938.1 | XP_041426872.1 SH3 and PX domain-containing protein 2A isoform X9 | 6994 bp | XP_041426872 | X. laevis.S |
XM_041570939 | XM_041570939.1 | XP_041426873.1 SH3 and PX domain-containing protein 2A isoform X10 | 6976 bp | XP_041426873 | X. laevis.S |
XM_041570940 | XM_041570940.1 | XP_041426874.1 SH3 and PX domain-containing protein 2A isoform X11 | 5904 bp | XP_041426874 | X. laevis.S |
XM_041568663 | XM_041568663.1 | XP_041424597.1 SH3 and PX domain-containing protein 2A isoform X1 | 4857 bp | XP_041424597 | X. laevis.L |
XM_041568664 | XM_041568664.1 | XP_041424598.1 SH3 and PX domain-containing protein 2A isoform X2 | 4839 bp | XP_041424598 | X. laevis.L |
XM_041568665 | XM_041568665.1 | XP_041424599.1 SH3 and PX domain-containing protein 2A isoform X3 | 5025 bp | XP_041424599 | X. laevis.L |
XM_041568666 | XM_041568666.1 | XP_041424600.1 SH3 and PX domain-containing protein 2A isoform X5 | 4773 bp | XP_041424600 | X. laevis.L |
XM_041568667 | XM_041568667.1 | XP_041424601.1 SH3 and PX domain-containing protein 2A isoform X6 | 4754 bp | XP_041424601 | X. laevis.L |
Models - Gene (36)
Source | Version | Model | Species |
NCBI | 10.0 | XBXT10g008055 | X. tropicalis |
NCBI | 10.1 | XBXL10_1g30351 | X. laevis.L |
NCBI | 10.1 | XBXL10_1g32617 | X. laevis.S |
ENSEMBL | 10.0 | sh3pxd2a | X. tropicalis |
JGI | 9.1 | Xelaev18034632m.g | X. laevis.L |
JGI | 9.1 | Xelaev18036911m.g | X. laevis.S |
Xenbase | 9.1 | gene29214 | X. tropicalis |
Xenbase | 9.2 | gene43087 | X. laevis.L |
Xenbase | 9.2 | gene15296 | X. laevis.S |
ENSEMBL | 9.1 | sh3pxd2a | X. tropicalis |
JGI | 7.1 | Xetro.G00488 | X. tropicalis |
JGI | 6.0 | XeXenL6RMv10026308m.g | X. laevis.L |
ENSEMBL | 4.1 | ENSXETG00000011399 | X. tropicalis |
JGI | 4.1 | C_scaffold_240000008 | X. tropicalis |
JGI | 4.1 | e_gw1.240.116.1 | X. tropicalis |
JGI | 4.1 | e_gw1.240.117.1 | X. tropicalis |
JGI | 4.1 | e_gw1.240.120.1 | X. tropicalis |
JGI | 4.1 | e_gw1.240.125.1 | X. tropicalis |
JGI | 4.1 | e_gw1.240.42.1 | X. tropicalis |
JGI | 4.1 | e_gw1.240.60.1 | X. tropicalis |
JGI | 4.1 | e_gw1.240.71.1 | X. tropicalis |
JGI | 4.1 | gw1.240.120.1 | X. tropicalis |
JGI | 4.1 | gw1.240.125.1 | X. tropicalis |
JGI | 4.1 | gw1.240.42.1 | X. tropicalis |
JGI | 4.1 | gw1.240.116.1 | X. tropicalis |
JGI | 4.1 | gw1.240.117.1 | X. tropicalis |
JGI | 4.1 | gw1.240.60.1 | X. tropicalis |
JGI | 4.1 | gw1.240.71.1 | X. tropicalis |
JGI | 4.1 | estExt_FilteredModels1.C_2400012 | X. tropicalis |
JGI | 4.1 | estExt_Genewise1.C_2400071 | X. tropicalis |
JGI | 4.1 | estExt_Genewise1.C_2400116 | X. tropicalis |
JGI | 4.1 | estExt_Genewise1.C_2400117 | X. tropicalis |
JGI | 4.1 | estExt_fgenesh1_pg.C_2400014 | X. tropicalis |
JGI | 4.1 | estExt_fgenesh1_pm.C_2400005 | X. tropicalis |
JGI | 4.1 | fgenesh1_pg.C_scaffold_240000014 | X. tropicalis |
JGI | 4.1 | fgenesh1_pm.C_scaffold_240000005 | X. tropicalis |
mRNAs based on gene models(50)
Source | Version | Model | Species |
NCBI | 10.0 | mRNA040006 | X. tropicalis |
NCBI | 10.1 | XBmRNA57180 | X. laevis.L |
NCBI | 10.1 | XBmRNA61569 | X. laevis.S |
ENSEMBL | 10.0 | ENSXETT00000109669 | X. tropicalis |
ENSEMBL | 10.0 | ENSXETT00000105814 | X. tropicalis |
ENSEMBL | 10.0 | ENSXETT00000121198 | X. tropicalis |
ENSEMBL | 10.0 | ENSXETT00000119665 | X. tropicalis |
ENSEMBL | 10.0 | ENSXETT00000114053 | X. tropicalis |
ENSEMBL | 10.0 | ENSXETT00000024886 | X. tropicalis |
JGI | 9.1 | Xelaev18034632m | X. laevis.L |
JGI | 9.1 | Xelaev18036911m | X. laevis.S |
Xenbase | 9.1 | rna56291 | X. tropicalis |
Xenbase | 9.2 | rna86298 | X. laevis.L |
Xenbase | 9.2 | rna44653 | X. laevis.S |
ENSEMBL | 9.1 | ENSXETT00000104120 | X. tropicalis |
ENSEMBL | 9.1 | ENSXETT00000069990 | X. tropicalis |
ENSEMBL | 9.1 | ENSXETT00000102872 | X. tropicalis |
ENSEMBL | 9.1 | ENSXETT00000086638 | X. tropicalis |
ENSEMBL | 9.1 | ENSXETT00000089231 | X. tropicalis |
ENSEMBL | 9.1 | ENSXETT00000024886 | X. tropicalis |
JGI | 7.1 | Xetro.G00488.3 | X. tropicalis |
JGI | 7.1 | Xetro.G00488.2 | X. tropicalis |
JGI | 7.1 | Xetro.G00488.1 | X. tropicalis |
JGI | 6.0 | XeXenL6RMv10026308m | X. laevis.L |
JGI | 4.1 | C_scaffold_240000008 | X. tropicalis |
ENSEMBL | 4.1 | ENSXETT00000024887 | X. tropicalis |
ENSEMBL | 4.1 | ENSXETT00000024886 | X. tropicalis |
ENSEMBL | 4.1 | ENSXETT00000024885 | X. tropicalis |
JGI | 4.1 | e_gw1.240.116.1 | X. tropicalis |
JGI | 4.1 | e_gw1.240.117.1 | X. tropicalis |
JGI | 4.1 | e_gw1.240.120.1 | X. tropicalis |
JGI | 4.1 | e_gw1.240.125.1 | X. tropicalis |
JGI | 4.1 | e_gw1.240.42.1 | X. tropicalis |
JGI | 4.1 | e_gw1.240.60.1 | X. tropicalis |
JGI | 4.1 | e_gw1.240.71.1 | X. tropicalis |
JGI | 4.1 | gw1.240.120.1 | X. tropicalis |
JGI | 4.1 | gw1.240.125.1 | X. tropicalis |
JGI | 4.1 | gw1.240.42.1 | X. tropicalis |
JGI | 4.1 | gw1.240.116.1 | X. tropicalis |
JGI | 4.1 | gw1.240.117.1 | X. tropicalis |
JGI | 4.1 | gw1.240.60.1 | X. tropicalis |
JGI | 4.1 | gw1.240.71.1 | X. tropicalis |
JGI | 4.1 | estExt_FilteredModels1.C_2400012 | X. tropicalis |
JGI | 4.1 | estExt_Genewise1.C_2400071 | X. tropicalis |
JGI | 4.1 | estExt_Genewise1.C_2400116 | X. tropicalis |
JGI | 4.1 | estExt_Genewise1.C_2400117 | X. tropicalis |
JGI | 4.1 | estExt_fgenesh1_pg.C_2400014 | X. tropicalis |
JGI | 4.1 | estExt_fgenesh1_pm.C_2400005 | X. tropicalis |
JGI | 4.1 | fgenesh1_pg.C_scaffold_240000014 | X. tropicalis |
JGI | 4.1 | fgenesh1_pm.C_scaffold_240000005 | X. tropicalis |
mRNAs from cDNA libraries (26)
Clone | Accession | Species | Library | Anatomy | Stage |
XM_002936804 | X. tropicalis | ||||
XM_004915849 | X. tropicalis | ||||
XM_004915848 | X. tropicalis | ||||
XM_031906001 | X. tropicalis | ||||
XM_031906000 | X. tropicalis | ||||
XM_031905999 | X. tropicalis | ||||
XM_031905998 | X. tropicalis | ||||
XM_031905997 | X. tropicalis | ||||
XM_018227425 | X. laevis.S | ||||
XM_018227424 | X. laevis.S | ||||
XM_018225223 | X. laevis.L | ||||
XM_041570940 | X. laevis.S | ||||
XM_041570939 | X. laevis.S | ||||
XM_041570938 | X. laevis.S | ||||
XM_041570936 | X. laevis.S | ||||
XM_041570935 | X. laevis.S | ||||
XM_041570934 | X. laevis.S | ||||
XM_041570933 | X. laevis.S | ||||
XM_041570932 | X. laevis.S | ||||
XM_041570931 | X. laevis.S | ||||
XM_041568668 | X. laevis.L | ||||
XM_041568667 | X. laevis.L | ||||
XM_041568666 | X. laevis.L | ||||
XM_041568665 | X. laevis.L | ||||
XM_041568664 | X. laevis.L | ||||
XM_041568663 | X. laevis.L |
ESTs (8)
Clone | Accession | 5'/3' | Species | Library | Anatomy | Stage |
IMAGE:7627253 | CX380722 | 5' | X. tropicalis | NIH_XGC_tropTad5 | whole organism | NF stage 35 and 36 to NF stage 41 |
IMAGE:7533952 | CX427813 | 5' | X. tropicalis | NIH_XGC_tropGas7 | whole organism | NF stage 10.5 to NF stage 12.5 |
xthr30L07 | CN107702 | 5' | X. tropicalis | Xenopus tropicalis xthr plasmid library | head | NF stage 25 to NF stage 35 and 36 |
TGas027b06 | AL647490 | 5' | X. tropicalis | XGC-gastrula | whole organism | NF stage 10.5 to NF stage 12 |
IMAGE:7533952 | CX427812 | 3' | X. tropicalis | NIH_XGC_tropGas7 | whole organism | NF stage 10.5 to NF stage 12.5 |
IMAGE:7627253 | CX380721 | 3' | X. tropicalis | NIH_XGC_tropTad5 | whole organism | NF stage 35 and 36 to NF stage 41 |
xthr30L07 | CN107701 | 3' | X. tropicalis | Xenopus tropicalis xthr plasmid library | head | NF stage 25 to NF stage 35 and 36 |
XL048k01 | BJ039152 | 5' | X. laevis.L | NIBB Mochii normalized Xenopus neurula library | whole organism | NF stage 15 |