Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Phenotypes Gene Literature (19) GO Terms (3) Nucleotides (157) Proteins (71) Interactants (130) Wiki
XB-GENEPAGE-493756

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for atrip - Xenopus tropicalis

RefSeq mRNAs(3)
Models - Gene (25)
Models - mRNA (27)
mRNAs (5)
ESTs (22)

RefSeq mRNAs (3)

Accession Version name Length Protein Species
NM_001015895 NM_001015895.3 ATR-interacting protein 2715 bp NP_001015895 X. tropicalis
XM_012960393 XM_012960393.3 ATR-interacting protein isoform X1 2593 bp XP_012815847 X. tropicalis
XM_012960391 XM_012960391.3 ATR-interacting protein isoform X1 2593 bp XP_012815845 X. tropicalis

Models - Gene (25)

Source Version Model Species
NCBI 10.0 XBXT10g013972 X. tropicalis
ENSEMBL 10.0 atrip X. tropicalis
Xenbase 9.1 gene346 X. tropicalis
ENSEMBL 9.1 atrip X. tropicalis
JGI 8.0 Xetrov14017080m.g X. tropicalis
JGI 7.1 Xetro.D01652 X. tropicalis
ENSEMBL 4.1 ENSXETG00000020928 X. tropicalis
JGI 4.1 e_gw1.88.209.1 X. tropicalis
JGI 4.1 e_gw1.88.210.1 X. tropicalis
JGI 4.1 e_gw1.88.249.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_880090 X. tropicalis
JGI 4.1 gw1.88.209.1 X. tropicalis
JGI 4.1 gw1.88.210.1 X. tropicalis
JGI 4.1 gw1.88.249.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_880067 X. tropicalis
JGI 4.1 estExt_Genewise1.C_880209 X. tropicalis
JGI 4.1 estExt_Genewise1.C_880210 X. tropicalis
JGI 4.1 estExt_Genewise1.C_880249 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_880030 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_880089 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_880033 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_88000024 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_88000031 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_88000090 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_88000091 X. tropicalis

mRNAs based on gene models(27)

Source Version Model Species
NCBI 10.0 mRNA069124 X. tropicalis
ENSEMBL 10.0 ENSXETT00000111864 X. tropicalis
ENSEMBL 10.0 ENSXETT00000045231 X. tropicalis
ENSEMBL 10.0 ENSXETT00000118243 X. tropicalis
Xenbase 9.1 rna1076 X. tropicalis
ENSEMBL 9.1 ENSXETT00000045231 X. tropicalis
JGI 8.0 Xetrov14017080m X. tropicalis
JGI 7.1 Xetro.D01652.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_880090 X. tropicalis
ENSEMBL 4.1 ENSXETT00000045231 X. tropicalis
JGI 4.1 e_gw1.88.209.1 X. tropicalis
JGI 4.1 e_gw1.88.210.1 X. tropicalis
JGI 4.1 e_gw1.88.249.1 X. tropicalis
JGI 4.1 gw1.88.209.1 X. tropicalis
JGI 4.1 gw1.88.210.1 X. tropicalis
JGI 4.1 gw1.88.249.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_880067 X. tropicalis
JGI 4.1 estExt_Genewise1.C_880209 X. tropicalis
JGI 4.1 estExt_Genewise1.C_880210 X. tropicalis
JGI 4.1 estExt_Genewise1.C_880249 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_880030 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_880089 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_880033 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_88000024 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_88000031 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_88000090 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_88000091 X. tropicalis

mRNAs from cDNA libraries (5)

Clone Accession Species Library Anatomy Stage
NM_001015895 X. tropicalis
IMAGE:7863948 BC125757 X. tropicalis
TTpA008e03 CR926451 X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
XM_012960391 X. tropicalis
XM_012960393 X. tropicalis

ESTs (22)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8961318 EL658917 5' X. tropicalis NICHD_XGC_tropInt_63 intestine unspecified stage
IMAGE:8952113 EL658356 5' X. tropicalis NICHD_XGC_tropInt_60 intestine frog
IMAGE:7615021 CX391360 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7541532 CX448129 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7801496 DR834755 5' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7743053 DN035061 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7735739 DN021699 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7716715 CX977120 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7694793 CX922658 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7664610 CX849744 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7586712 CX312854 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTpA008e03 BX706144 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TGas055m10 AL678154 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu009d24 AL635052 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7694793 CX922657 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7615021 DR896552 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7743053 DN035060 3' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7735739 DN021698 3' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7716715 CX977119 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7664610 CX849743 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7541532 CX448128 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TTpA008e03 BX706145 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40