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Summary Expression Phenotypes Gene Literature (0) GO Terms (19) Nucleotides (134) Proteins (46) Interactants (23) Wiki
XB-GENEPAGE-492865

Show:     All X. tropicalis X. laevis

Nucleotide sequences for pspc1 - All

RefSeq mRNAs(5)
Models - Gene (24)
Models - mRNA (29)
mRNAs (12)
ESTs (38)

RefSeq mRNAs (5)

Accession Version Protein Name Length Protein Species
XM_002937958 XM_002937958.5 paraspeckle component 1 isoform X1 1954 bp XP_002938004 X. tropicalis
XM_031897309 XM_031897309.1 XP_031753169.1 paraspeckle component 1 isoform X2 1777 bp XP_031753169 X. tropicalis
XM_041582670 XM_041582670.1 XP_041438604.1 paraspeckle component 1 isoform X1 2194 bp XP_041438604 X. laevis.L
XM_041582671 XM_041582671.1 XP_041438605.1 paraspeckle component 1 isoform X2 4387 bp XP_041438605 X. laevis.L
XM_041582672 XM_041582672.1 XP_041438606.1 paraspeckle component 1 isoform X3 1323 bp XP_041438606 X. laevis.L

Models - Gene (24)

Source Version Model Species
NCBI 10.1 XBXL10_1g8442 X. laevis.L
NCBI 10.0 XBXT10g012103 X. tropicalis
ENSEMBL 10.0 pspc1 X. tropicalis
Xenbase 9.2 gene45497 X. laevis.L
JGI 9.1 Xelaev18013799m.g X. laevis.L
Xenbase 9.1 gene6606 X. tropicalis
ENSEMBL 9.1 PSPC1 X. tropicalis
JGI 8.0 Xetrov14010745m.g X. tropicalis
JGI 7.1 Xetro.B01874 X. tropicalis
JGI 6.0 XeXenL6RMv10019311m.g X. laevis.L
JGI 4.1 estExt_fgenesh1_pg.C_3290016 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_3290002 X. tropicalis
JGI 4.1 e_gw1.329.2.1 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_329000002 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_329000016 X. tropicalis
JGI 4.1 e_gw1.329.38.1 X. tropicalis
JGI 4.1 e_gw1.329.64.1 X. tropicalis
JGI 4.1 gw1.329.2.1 X. tropicalis
JGI 4.1 gw1.329.38.1 X. tropicalis
JGI 4.1 gw1.329.64.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_3290014 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3290002 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3290038 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3290064 X. tropicalis

mRNAs based on gene models(29)

Source Version Model Species
NCBI 10.1 XBmRNA15979 X. laevis.L
NCBI 10.0 mRNA059968 X. tropicalis
ENSEMBL 10.0 ENSXETT00000100188 X. tropicalis
Xenbase 9.2 rna89890 X. laevis.L
ENSEMBL 9.1 ENSXETT00000100188 X. tropicalis
Xenbase 9.1 rna21336 X. tropicalis
JGI 9.1 Xelaev18013799m X. laevis.L
JGI 8.0 Xetrov14010745m X. tropicalis
JGI 7.1 Xetro.B01874.6 X. tropicalis
JGI 7.1 Xetro.B01874.3 X. tropicalis
JGI 7.1 Xetro.B01874.2 X. tropicalis
JGI 7.1 Xetro.B01874.1 X. tropicalis
JGI 7.1 Xetro.B01874.4 X. tropicalis
JGI 7.1 Xetro.B01874.5 X. tropicalis
JGI 6.0 XeXenL6RMv10019311m X. laevis.L
JGI 4.1 gw1.329.38.1 X. tropicalis
JGI 4.1 e_gw1.329.38.1 X. tropicalis
JGI 4.1 e_gw1.329.64.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3290016 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_3290002 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_3290014 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3290002 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3290038 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3290064 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_329000016 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_329000002 X. tropicalis
JGI 4.1 gw1.329.2.1 X. tropicalis
JGI 4.1 e_gw1.329.2.1 X. tropicalis
JGI 4.1 gw1.329.64.1 X. tropicalis

mRNAs from cDNA libraries (12)

Clone Accession Species Library Anatomy Stage
TGas125h06 CR761729 X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
XM_002937958 X. tropicalis
XM_031897309 X. tropicalis
XR_004221398 X. tropicalis
XR_004221399 X. tropicalis
XR_208351 X. tropicalis
546_8A14 DQ096980 X. laevis.L
XM_041582670 X. laevis.L
XM_041582671 X. laevis.L
XM_041582672 X. laevis.L
XR_005965519 X. laevis.L
XR_005965520 X. laevis.L

ESTs (38)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7545769 CX488224 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7545252 CX487615 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
xtbs10F06 CN075740 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7736338 DN023304 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:6985528 CF152644 5' X. tropicalis NICHD_XGC_Emb8 whole organism NF stage 40 to NF stage 45
IMAGE:7598844 CX388449 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
THdA007n17 CR560191 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
xtbs07P03 CN093140 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
st4o05 DC174377 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:9019152 EL868367 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
rst4o05 DC144052 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7545252 CX487614 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7545769 CX488223 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
THdA008l07 CR562724 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7599552 CX344078 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
XZT5247 CX414219 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7736338 DN023303 3' X. tropicalis NIH_XGC_tropLiv1 liver frog
xtbs17D09 CN080113 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs07P03 CN093139 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGp998G1414205 BX845654 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
PBX0058D08 AW637422 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:6867074 CA982559 5' X. laevis.L Wellcome CRC pSK egg egg unfertilized egg stage
IMAGE:3516965 BG347967 5' X. laevis.L Kirschner embryo St10 14 whole organism NF stage 10 to NF stage 14
PBX0159C12 AW646049 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
xl264m19 DC113186 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl265m19 DC113496 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl265n20 DC113516 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl326d21 DC130924 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL467a08ex BP691988 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL507k01ex BP703216 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGE:6633830 BU908403 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
rxl264m19 DC078355 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl326d21 DC095031 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl265m19 DC078649 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL507k01ex BP736131 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGE:3516965 BG413739 3' X. laevis.L Kirschner embryo St10 14 whole organism NF stage 10 to NF stage 14
rxl265n19 DC078667 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl265p21 DC078707 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15