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Summary Expression Phenotypes Gene Literature (2) GO Terms (4) Nucleotides (160) Proteins (53) Interactants (33) Wiki
XB-GENEPAGE-492762

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for sema4d - All

RefSeq mRNAs(5)
Models - Gene (23)
Models - mRNA (33)
mRNAs (11)
ESTs (44)

RefSeq mRNAs (5)

Accession Version name Length Protein Species
NM_001167998 NM_001167998.1 semaphorin-4D precursor 3490 bp NP_001161470 X. tropicalis
XM_041564705 XM_041564705.1 XP_041420639.1 semaphorin-4D isoform X1 4120 bp XP_041420639 X. laevis.L
XM_041564717 XM_041564717.1 XP_041420651.1 semaphorin-4D isoform X2 2861 bp XP_041420651 X. laevis.L
XM_041564723 XM_041564723.1 XP_041420657.1 semaphorin-4D isoform X3 2700 bp XP_041420657 X. laevis.L
XM_041564729 XM_041564729.1 XP_041420663.1 semaphorin-4D isoform X4 2541 bp XP_041420663 X. laevis.L

Models - Gene (23)

Source Version Model Species
NCBI 10.0 XBXT10g005033 X. tropicalis
NCBI 10.1 XBXL10_1g2180 X. laevis.L
NCBI 10.1 XBXL10_1g4950 X. laevis.S
ENSEMBL 10.0 sema4d X. tropicalis
JGI 9.1 Xelaev18006989m.g X. laevis.L
JGI 9.1 Xelaev18010192m.g X. laevis.S
Xenbase 9.1 gene15895 X. tropicalis
Xenbase 9.2 gene8154 X. laevis.L
Xenbase 9.2 gene9897 X. laevis.S
ENSEMBL 9.1 sema4d X. tropicalis
JGI 7.1 Xetro.A01582 X. tropicalis
JGI 6.0 XeXenL6RMv10007845m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000010843 X. tropicalis
JGI 4.1 e_gw1.256.43.1 X. tropicalis
JGI 4.1 e_gw1.256.36.1 X. tropicalis
JGI 4.1 e_gw1.256.42.1 X. tropicalis
JGI 4.1 gw1.256.36.1 X. tropicalis
JGI 4.1 gw1.256.42.1 X. tropicalis
JGI 4.1 gw1.256.43.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_2560013 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2560042 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2560043 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_256000017 X. tropicalis

mRNAs based on gene models(33)

Source Version Model Species
NCBI 10.0 mRNA024983 X. tropicalis
NCBI 10.1 XBmRNA4027 X. laevis.L
NCBI 10.1 XBmRNA9262 X. laevis.S
ENSEMBL 10.0 ENSXETT00000064925 X. tropicalis
ENSEMBL 10.0 ENSXETT00000094018 X. tropicalis
JGI 9.1 Xelaev18006989m X. laevis.L
JGI 9.1 Xelaev18010192m X. laevis.S
Xenbase 9.1 rna35195 X. tropicalis
Xenbase 9.2 rna23737 X. laevis.L
Xenbase 9.2 rna28771 X. laevis.S
ENSEMBL 9.1 ENSXETT00000064925 X. tropicalis
ENSEMBL 9.1 ENSXETT00000088531 X. tropicalis
ENSEMBL 9.1 ENSXETT00000096135 X. tropicalis
ENSEMBL 9.1 ENSXETT00000076257 X. tropicalis
ENSEMBL 9.1 ENSXETT00000095519 X. tropicalis
ENSEMBL 9.1 ENSXETT00000102529 X. tropicalis
ENSEMBL 9.1 ENSXETT00000094018 X. tropicalis
ENSEMBL 9.1 ENSXETT00000023736 X. tropicalis
ENSEMBL 9.1 ENSXETT00000070370 X. tropicalis
ENSEMBL 9.1 ENSXETT00000097730 X. tropicalis
JGI 7.1 Xetro.A01582.1 X. tropicalis
JGI 6.0 XeXenL6RMv10007845m X. laevis.L
JGI 4.1 e_gw1.256.43.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000023736 X. tropicalis
JGI 4.1 e_gw1.256.36.1 X. tropicalis
JGI 4.1 e_gw1.256.42.1 X. tropicalis
JGI 4.1 gw1.256.36.1 X. tropicalis
JGI 4.1 gw1.256.42.1 X. tropicalis
JGI 4.1 gw1.256.43.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_2560013 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2560042 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2560043 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_256000017 X. tropicalis

mRNAs from cDNA libraries (11)

Clone Accession Species Library Anatomy Stage
TEgg039c19 CR761301 X. tropicalis
IMAGE:7732095 BC167391 X. tropicalis
NM_001167998 X. tropicalis
XM_012958827 X. tropicalis
XM_018259280 X. laevis.L
XM_018259271 X. laevis.L
XM_018243885 X. laevis.S
XM_041564729 X. laevis.L
XM_041564723 X. laevis.L
XM_041564717 X. laevis.L
XM_041564705 X. laevis.L

ESTs (44)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8854407 EL816349 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:7636614 CX406831 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7576894 CX422271 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7609478 CX410765 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7574911 CX441649 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7565804 CX482466 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7617516 DR897493 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7708040 CX961511 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7689524 CX913802 5' X. tropicalis NIH_XGC_tropTe4 testis frog
TTpA002h17 BX708177 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TNeu094m04 AL787297 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:8854407 EL816350 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:7617516 DR897492 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7713911 CX972457 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7708040 CX961510 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7689524 CX913801 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7565804 CX482465 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7574911 CX441648 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7576894 CX422270 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7609478 CX410764 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7636614 CX406830 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTpA002h17 BX708178 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
xlk102l06ex DC036485 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:8824756 EG576173 5' X. laevis.L NICHD_XGC_int_m whole organism NF stage 56 to NF stage 62
XL470a22ex BP693265 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGp998I218305 BX845909 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
XL170c07 BJ614968 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL059d05 BJ058398 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:5162344 BQ397767 5' X. laevis.L Soares NXEG egg unfertilized egg stage
IMAGE:4783172 BM261138 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:4783101 BI449871 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:3403100 BG364748 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
PBX0156F09 AW645819 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
PBX0110D02 AW641788 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
PBX0082F04 AW639418 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
rxlk102l06ex DC003625 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL170c07 BJ631649 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:5162344 BQ397766 3' X. laevis.L Soares NXEG egg unfertilized egg stage
IMAGE:4783172 BM261062 3' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:4783101 BI450353 3' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:3403100 BG020588 3' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
PBX0003H01 AW633104 3' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
PBX0003F12 AW633092 3' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
PBX0003F01 AW633081 3' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage