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Summary Expression Phenotypes Gene Literature (1) GO Terms (6) Nucleotides (248) Proteins (56) Interactants (16) Wiki
XB-GENEPAGE-492564

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for brd3 - Xenopus tropicalis

RefSeq mRNAs(3)
Models - Gene (24)
Models - mRNA (27)
mRNAs (9)
ESTs (60)

RefSeq mRNAs (3)

Accession Version name Length Protein Species
NM_001256903 NM_001256903.1 bromodomain-containing protein 3 2858 bp NP_001243832 X. tropicalis
XM_031890504 XM_031890504.1 XP_031746364.1 bromodomain-containing protein 3 isoform X2 4017 bp XP_031746364 X. tropicalis
XM_012968544 XM_012968544.3 bromodomain-containing protein 3 isoform X1 4143 bp XP_012823998 X. tropicalis

Models - Gene (24)

Source Version Model Species
NCBI 10.0 XBXT10g007760 X. tropicalis
ENSEMBL 10.0 brd3 X. tropicalis
Xenbase 9.1 gene720 X. tropicalis
ENSEMBL 9.1 brd3 X. tropicalis
JGI 8.0 Xetrov14044236m.g X. tropicalis
JGI 7.1 Xetro.H00065 X. tropicalis
ENSEMBL 4.1 ENSXETG00000019589 X. tropicalis
JGI 4.1 e_gw1.137.237.1 X. tropicalis
JGI 4.1 gw1.137.237.1 X. tropicalis
JGI 4.1 gw1.137.346.1 X. tropicalis
JGI 4.1 gw1.137.335.1 X. tropicalis
JGI 4.1 gw1.137.337.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1370014 X. tropicalis
JGI 4.1 e_gw1.137.335.1 X. tropicalis
JGI 4.1 e_gw1.137.337.1 X. tropicalis
JGI 4.1 e_gw1.137.346.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1370237 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1370335 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1370337 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1370346 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1370013 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1370004 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_137000013 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_137000004 X. tropicalis

mRNAs based on gene models(27)

Source Version Model Species
NCBI 10.0 mRNA038448 X. tropicalis
ENSEMBL 10.0 ENSXETT00000120714 X. tropicalis
ENSEMBL 10.0 ENSXETT00000063750 X. tropicalis
Xenbase 9.1 rna2295 X. tropicalis
ENSEMBL 9.1 ENSXETT00000063750 X. tropicalis
JGI 8.0 Xetrov14044236m X. tropicalis
JGI 7.1 Xetro.H00065.3 X. tropicalis
JGI 7.1 Xetro.H00065.2 X. tropicalis
JGI 7.1 Xetro.H00065.1 X. tropicalis
JGI 4.1 e_gw1.137.237.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000042370 X. tropicalis
JGI 4.1 e_gw1.137.335.1 X. tropicalis
JGI 4.1 e_gw1.137.337.1 X. tropicalis
JGI 4.1 e_gw1.137.346.1 X. tropicalis
JGI 4.1 gw1.137.237.1 X. tropicalis
JGI 4.1 gw1.137.335.1 X. tropicalis
JGI 4.1 gw1.137.337.1 X. tropicalis
JGI 4.1 gw1.137.346.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1370014 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1370237 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1370335 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1370337 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1370346 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1370013 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1370004 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_137000013 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_137000004 X. tropicalis

mRNAs from cDNA libraries (9)

Clone Accession Species Library Anatomy Stage
TEgg103p20 CR926272 X. tropicalis
IMAGE:7682136 BC158459 X. tropicalis
IMAGE:8889270 BC161214 X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
NM_001256903 X. tropicalis
XM_012968544 X. tropicalis
DN085391 X. tropicalis
AL845796 X. tropicalis
AL658811 X. tropicalis
XM_031890504 X. tropicalis

ESTs (60)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8889270 EL848122 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
st78l08 DC186178 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st73b19 DC184730 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st56e10 DC180520 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st2n19 DC171926 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7553771 CX492005 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7549690 CX484940 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7605263 CX412238 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7559658 CX514732 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7559499 CX514301 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7672396 CX881099 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7525548 CX443126 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7525338 CX442695 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7528444 CX425153 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
THdA006a08 CR576116 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TGas118o20 AL973205 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas119e23 AL969915 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas127l12 AL969085 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas136m01 AL967627 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas115n02 AL967075 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas128m12 AL961367 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas103b23 AL958338 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas084a11 AL774541 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas007b08 AL633487 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu144i08 AL789648 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu134l19 AL789471 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu104p14 AL786218 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TGas060h02 AL682145 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas060c21 AL681703 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu060o07 AL676445 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TGas055l23 AL676381 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu035p14 AL657531 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu006g03 AL637257 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:6991985 CF241210 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:6994716 CF239940 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:6987433 CF221179 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:8889270 EL848123 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
rst73b19 DC154575 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst56e10 DC150246 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7672396 CX881098 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7559658 CX514731 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7559499 CX514300 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7553771 CX492004 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7528444 CX425152 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7605263 CX412237 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
THdA006a08 CR576117 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TGas118o18 BX762913 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas128m12 BX761520 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas127l12 BX761066 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas136m01 BX759818 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas115n02 BX756660 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas119e23 BX756387 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas103b23 BX754422 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas060h02 BX747734 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas060c21 BX747686 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas055l23 BX747138 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas054m17 BX745700 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu134l19 BX699683 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu104p14 BX691870 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu060o07 BX687583 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21