Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Phenotypes Gene Literature (2) GO Terms (29) Nucleotides (108) Proteins (56) Interactants (264) Wiki
XB-GENEPAGE-492527

Show:     All X. tropicalis X. laevis

Nucleotide sequences for trpm1 - All

RefSeq mRNAs(11)
Models - Gene (19)
Models - mRNA (40)
mRNAs (12)
ESTs (14)

RefSeq mRNAs (11)

Accession Version Protein Name Length Protein Species
XM_031899151 XM_031899151.1 XP_031755011.1 transient receptor potential cation channel subfamily M member 1 isoform X1 5290 bp XP_031755011 X. tropicalis
XM_031899152 XM_031899152.1 XP_031755012.1 transient receptor potential cation channel subfamily M member 1 isoform X2 5287 bp XP_031755012 X. tropicalis
XM_031899153 XM_031899153.1 XP_031755013.1 transient receptor potential cation channel subfamily M member 1 isoform X3 5269 bp XP_031755013 X. tropicalis
XM_031899154 XM_031899154.1 XP_031755014.1 transient receptor potential cation channel subfamily M member 1 isoform X4 5286 bp XP_031755014 X. tropicalis
XM_018254562 XM_018254562.2 XP_018110051.2 transient receptor potential cation channel subfamily M member 1-like 7180 bp XP_018110051 X. laevis.S
XM_018252999 XM_018252999.2 XP_018108488.1 transient receptor potential cation channel subfamily M member 1-like isoform X5 1299 bp XP_018108488 X. laevis.L
XM_041586736 XM_041586736.1 XP_041442670.1 transient receptor potential cation channel subfamily M member 1-like isoform X1 6334 bp XP_041442670 X. laevis.L
XM_041586737 XM_041586737.1 XP_041442671.1 transient receptor potential cation channel subfamily M member 1-like isoform X2 6331 bp XP_041442671 X. laevis.L
XM_041586739 XM_041586739.1 XP_041442673.1 transient receptor potential cation channel subfamily M member 1-like isoform X3 6313 bp XP_041442673 X. laevis.L
XM_041586740 XM_041586740.1 XP_041442674.1 transient receptor potential cation channel subfamily M member 1-like isoform X4 6289 bp XP_041442674 X. laevis.L
XM_041586741 XM_041586741.1 XP_041442675.1 transient receptor potential cation channel subfamily M member 1-like isoform X6 6246 bp XP_041442675 X. laevis.L

Models - Gene (19)

Source Version Model Species
NCBI 10.1 XBXL10_1g13136 X. laevis.L
NCBI 10.1 XBXL10_1g15783 X. laevis.S
NCBI 10.0 XBXT10g018679 X. tropicalis
ENSEMBL 10.0 trpm1 X. tropicalis
Xenbase 9.1 gene32342 X. tropicalis
ENSEMBL 9.1 trpm1 X. tropicalis
JGI 7.1 Xetro.I00989 X. tropicalis
JGI 6.0 XeXenL6RMv10015208m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000016479 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_118000009 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_118000028 X. tropicalis
JGI 4.1 gw1.118.48.1 X. tropicalis
JGI 4.1 gw1.118.58.1 X. tropicalis
JGI 4.1 gw1.118.6.1 X. tropicalis
JGI 4.1 e_gw1.118.31.1 X. tropicalis
JGI 4.1 e_gw1.118.48.1 X. tropicalis
JGI 4.1 e_gw1.118.58.1 X. tropicalis
JGI 4.1 gw1.118.31.1 X. tropicalis
JGI 4.1 e_gw1.118.6.1 X. tropicalis

mRNAs based on gene models(40)

Source Version Model Species
NCBI 10.1 XBmRNA24874 X. laevis.L
NCBI 10.1 XBmRNA29503 X. laevis.S
ENSEMBL 10.0 ENSXETT00000096458 X. tropicalis
ENSEMBL 10.0 ENSXETT00000087160 X. tropicalis
ENSEMBL 10.0 ENSXETT00000086732 X. tropicalis
NCBI 10.0 mRNA092251 X. tropicalis
ENSEMBL 10.0 ENSXETT00000035969 X. tropicalis
ENSEMBL 9.1 ENSXETT00000087160 X. tropicalis
ENSEMBL 9.1 ENSXETT00000035969 X. tropicalis
ENSEMBL 9.1 ENSXETT00000072991 X. tropicalis
ENSEMBL 9.1 ENSXETT00000086732 X. tropicalis
ENSEMBL 9.1 ENSXETT00000088311 X. tropicalis
ENSEMBL 9.1 ENSXETT00000094976 X. tropicalis
ENSEMBL 9.1 ENSXETT00000096458 X. tropicalis
ENSEMBL 9.1 ENSXETT00000096644 X. tropicalis
ENSEMBL 9.1 ENSXETT00000099722 X. tropicalis
ENSEMBL 9.1 ENSXETT00000101131 X. tropicalis
Xenbase 9.1 rna61261 X. tropicalis
JGI 7.1 Xetro.I00989.1 X. tropicalis
JGI 6.0 XeXenL6RMv10015208m X. laevis.S
JGI 4.1 e_gw1.118.31.1 X. tropicalis
JGI 4.1 gw1.118.6.1 X. tropicalis
JGI 4.1 e_gw1.118.6.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000035956 X. tropicalis
JGI 4.1 e_gw1.118.48.1 X. tropicalis
JGI 4.1 e_gw1.118.58.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_118000028 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_118000009 X. tropicalis
ENSEMBL 4.1 ENSXETT00000035967 X. tropicalis
ENSEMBL 4.1 ENSXETT00000035968 X. tropicalis
ENSEMBL 4.1 ENSXETT00000035969 X. tropicalis
ENSEMBL 4.1 ENSXETT00000035965 X. tropicalis
JGI 4.1 gw1.118.31.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000035971 X. tropicalis
ENSEMBL 4.1 ENSXETT00000035973 X. tropicalis
ENSEMBL 4.1 ENSXETT00000035974 X. tropicalis
JGI 4.1 gw1.118.48.1 X. tropicalis
JGI 4.1 gw1.118.58.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000035963 X. tropicalis
ENSEMBL 4.1 ENSXETT00000035959 X. tropicalis

mRNAs from cDNA libraries (12)

Clone Accession Species Library Anatomy Stage
IMAGE:7741015 BC168598 X. tropicalis NIH_XGC_tropLiv1 liver frog
XM_031899151 X. tropicalis
XM_031899152 X. tropicalis
XM_031899153 X. tropicalis
XM_031899154 X. tropicalis
XM_018254562 X. laevis.S
XM_018252999 X. laevis.L
XM_041586736 X. laevis.L
XM_041586737 X. laevis.L
XM_041586739 X. laevis.L
XM_041586740 X. laevis.L
XM_041586741 X. laevis.L

ESTs (14)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:9017999 EL866404 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:7615735 CX391878 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7741015 DN031687 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7756014 DN058813 5' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
IMAGE:7805099 DR841167 5' X. tropicalis NIH_XGC_tropFat1 fat body frog
TTpA075m20 BX729780 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:9017999 EL866405 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:7741015 DN031686 3' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7615735 CX391877 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7805099 DR841166 3' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:4930069 BQ730585 5' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGp998G1510852 BX849095 5' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
XL085n12 BJ066339 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL085n12 BJ083660 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25