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Summary Expression Phenotypes Gene Literature (0) GO Terms (1) Nucleotides (94) Proteins (64) Interactants (4) Wiki
XB-GENEPAGE-492081

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for caskin1 - All

RefSeq mRNAs(7)
Models - Gene (28)
Models - mRNA (38)
mRNAs (11)
ESTs (5)

RefSeq mRNAs (7)

Accession Version name Length Protein Species
XM_041578008 XM_041578008.1 XP_041433942.1 caskin-1 isoform X3 6099 bp XP_041433942 X. laevis.S
XM_041577364 XM_041577364.1 XP_041433298.1 caskin-1-like isoform X1 6635 bp XP_041433298 X. laevis.L
XM_041577365 XM_041577365.1 XP_041433299.1 caskin-1-like isoform X2 6632 bp XP_041433299 X. laevis.L
XM_041577366 XM_041577366.1 XP_041433300.1 caskin-1-like isoform X3 6465 bp XP_041433300 X. laevis.L
XM_041577367 XM_041577367.1 XP_041433301.1 caskin-1-like isoform X4 6455 bp XP_041433301 X. laevis.L
XM_041578006 XM_041578006.1 XP_041433940.1 caskin-1 isoform X1 6289 bp XP_041433940 X. laevis.S
XM_041578007 XM_041578007.1 XP_041433941.1 caskin-1 isoform X2 6286 bp XP_041433941 X. laevis.S

Models - Gene (28)

Source Version Model Species
NCBI 10.0 XBXT10g008212 X. tropicalis
NCBI 10.1 XBXL10_1g44000 X. laevis.S
NCBI 10.1 XBXL10_1g41344 X. laevis.L
ENSEMBL 10.0 caskin1 X. tropicalis
JGI 9.1 Xelaev18047733m.g X. laevis.S
JGI 9.1 Xelaev18045479m.g X. laevis.L
Xenbase 9.1 gene24472 X. tropicalis
Xenbase 9.2 gene42290 X. laevis.S
Xenbase 9.2 gene35520 X. laevis.L
ENSEMBL 9.1 caskin1 X. tropicalis
JGI 7.1 Xetro.I01472 X. tropicalis
JGI 6.0 XeXenL6RMv10017489m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000016106 X. tropicalis
JGI 4.1 e_gw1.27.434.1 X. tropicalis
JGI 4.1 e_gw1.27.253.1 X. tropicalis
JGI 4.1 e_gw1.27.254.1 X. tropicalis
JGI 4.1 e_gw1.27.428.1 X. tropicalis
JGI 4.1 gw1.27.428.1 X. tropicalis
JGI 4.1 gw1.27.434.1 X. tropicalis
JGI 4.1 gw1.27.253.1 X. tropicalis
JGI 4.1 gw1.27.254.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_270083 X. tropicalis
JGI 4.1 estExt_Genewise1.C_270251 X. tropicalis
JGI 4.1 estExt_Genewise1.C_270252 X. tropicalis
JGI 4.1 estExt_Genewise1.C_270432 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_270122 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_27000123 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_27000124 X. tropicalis

mRNAs based on gene models(38)

Source Version Model Species
NCBI 10.0 mRNA040813 X. tropicalis
NCBI 10.1 XBmRNA78031 X. laevis.L
NCBI 10.1 XBmRNA82780 X. laevis.S
ENSEMBL 10.0 ENSXETT00000095114 X. tropicalis
ENSEMBL 10.0 ENSXETT00000070065 X. tropicalis
ENSEMBL 10.0 ENSXETT00000035123 X. tropicalis
JGI 9.1 Xelaev18045479m X. laevis.L
JGI 9.1 Xelaev18047733m X. laevis.S
Xenbase 9.1 rna48720 X. tropicalis
Xenbase 9.2 rna75523 X. laevis.L
Xenbase 9.2 rna85132 X. laevis.S
ENSEMBL 9.1 ENSXETT00000070065 X. tropicalis
ENSEMBL 9.1 ENSXETT00000035123 X. tropicalis
ENSEMBL 9.1 ENSXETT00000095114 X. tropicalis
ENSEMBL 9.1 ENSXETT00000079431 X. tropicalis
ENSEMBL 9.1 ENSXETT00000082928 X. tropicalis
ENSEMBL 9.1 ENSXETT00000105019 X. tropicalis
ENSEMBL 9.1 ENSXETT00000067272 X. tropicalis
ENSEMBL 9.1 ENSXETT00000082682 X. tropicalis
ENSEMBL 9.1 ENSXETT00000082707 X. tropicalis
JGI 7.1 Xetro.I01472.1 X. tropicalis
JGI 6.0 XeXenL6RMv10017489m X. laevis.S
JGI 4.1 e_gw1.27.434.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000035123 X. tropicalis
JGI 4.1 e_gw1.27.253.1 X. tropicalis
JGI 4.1 e_gw1.27.254.1 X. tropicalis
JGI 4.1 e_gw1.27.428.1 X. tropicalis
JGI 4.1 gw1.27.428.1 X. tropicalis
JGI 4.1 gw1.27.434.1 X. tropicalis
JGI 4.1 gw1.27.253.1 X. tropicalis
JGI 4.1 gw1.27.254.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_270083 X. tropicalis
JGI 4.1 estExt_Genewise1.C_270251 X. tropicalis
JGI 4.1 estExt_Genewise1.C_270252 X. tropicalis
JGI 4.1 estExt_Genewise1.C_270432 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_270122 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_27000123 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_27000124 X. tropicalis

mRNAs from cDNA libraries (11)

Clone Accession Species Library Anatomy Stage
XM_002932468 X. tropicalis
XM_031892913 X. tropicalis
XM_031892912 X. tropicalis
XM_031892911 X. tropicalis
XM_041578008 X. laevis.S
XM_041578007 X. laevis.S
XM_041578006 X. laevis.S
XM_041577367 X. laevis.L
XM_041577366 X. laevis.L
XM_041577365 X. laevis.L
XM_041577364 X. laevis.L

ESTs (5)

Clone Accession 5'/3' Species Library Anatomy Stage
CAAO2998 CX933646 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7646120 CX804062 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7641711 CX795549 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
CAAO2998 CX933645 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:3474894 BI347575 3' X. laevis.S Wellcome CRC pcDNAI St10 5 whole organism NF stage 10.5