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Summary Expression Phenotypes Gene Literature (0) GO Terms (5) Nucleotides (278) Proteins (79) Interactants (30) Wiki
XB-GENEPAGE-491607

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for yars1 - All

RefSeq mRNAs(9)
Models - Gene (28)
Models - mRNA (40)
mRNAs (14)
ESTs (139)

RefSeq mRNAs (9)

Accession Version Protein Name Length Protein Species
NM_001004987 NM_001004987.1 tyrosine--tRNA ligase, cytoplasmic 1928 bp NP_001004987 X. tropicalis
NM_001087277 NM_001087277.1 tyrosine--tRNA ligase, cytoplasmic 2053 bp NP_001080746 X. laevis.S
XM_041582992 XM_041582992.1 XP_041438926.1 tyrosine--tRNA ligase, cytoplasmic isoform X1 2159 bp XP_041438926 X. laevis.S
XM_041582993 XM_041582993.1 XP_041438927.1 tyrosine--tRNA ligase, cytoplasmic isoform X1 2109 bp XP_041438927 X. laevis.S
XM_018246790 XM_018246790.2 tyrosine--tRNA ligase, cytoplasmic 1966 bp XP_018102279 X. laevis.L
XM_018246791 XM_018246791.2 tyrosine--tRNA ligase, cytoplasmic 1952 bp XP_018102280 X. laevis.L
XM_018246792 XM_018246792.2 tyrosine--tRNA ligase, cytoplasmic 1949 bp XP_018102281 X. laevis.L
XM_018246793 XM_018246793.2 tyrosine--tRNA ligase, cytoplasmic 1966 bp XP_018102282 X. laevis.L
XM_041582182 XM_041582182.1 XP_041438116.1 tyrosine--tRNA ligase, cytoplasmic 1851 bp XP_041438116 X. laevis.L

Models - Gene (28)

Source Version Model Species
NCBI 10.1 XBXL10_1g10173 X. laevis.S
NCBI 10.1 XBXL10_1g7370 X. laevis.L
NCBI 10.0 XBXT10g009233 X. tropicalis
ENSEMBL 10.0 yars1 X. tropicalis
Xenbase 9.2 gene1112 X. laevis.S
Xenbase 9.2 gene9133 X. laevis.L
JGI 9.1 Xelaev18004043m.g X. laevis.S
JGI 9.1 Xelaev18012608m.g X. laevis.L
Xenbase 9.1 gene21313 X. tropicalis
ENSEMBL 9.1 yars1 X. tropicalis
JGI 7.2 Xelaev16040381m.g X. laevis.S
JGI 7.1 Xetro.B00264 X. tropicalis
JGI 6.0 XeXenL6RMv10025296m.g X. laevis.S
JGI 6.0 XeXenL6RMv10032665m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000027865 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_552000021 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_552000007 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_5520021 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_5520012 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_5520007 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_552000010 X. tropicalis
JGI 4.1 gw1.552.47.1 X. tropicalis
JGI 4.1 gw1.552.46.1 X. tropicalis
JGI 4.1 gw1.552.3.1 X. tropicalis
JGI 4.1 e_gw1.552.47.1 X. tropicalis
JGI 4.1 e_gw1.552.46.1 X. tropicalis
JGI 4.1 e_gw1.552.3.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_552000022 X. tropicalis

mRNAs based on gene models(40)

Source Version Model Species
NCBI 10.1 XBmRNA19000 X. laevis.S
NCBI 10.1 XBmRNA13869 X. laevis.L
ENSEMBL 10.0 ENSXETT00000057912 X. tropicalis
NCBI 10.0 mRNA045666 X. tropicalis
ENSEMBL 10.0 ENSXETT00000070686 X. tropicalis
ENSEMBL 10.0 ENSXETT00000077316 X. tropicalis
ENSEMBL 10.0 ENSXETT00000067845 X. tropicalis
Xenbase 9.2 rna3230 X. laevis.S
Xenbase 9.2 rna26552 X. laevis.L
Xenbase 9.1 rna43646 X. tropicalis
ENSEMBL 9.1 ENSXETT00000077316 X. tropicalis
ENSEMBL 9.1 ENSXETT00000096323 X. tropicalis
JGI 9.1 Xelaev18004043m X. laevis.S
ENSEMBL 9.1 ENSXETT00000070686 X. tropicalis
JGI 9.1 Xelaev18012608m X. laevis.L
ENSEMBL 9.1 ENSXETT00000057912 X. tropicalis
ENSEMBL 9.1 ENSXETT00000067845 X. tropicalis
JGI 7.2 Xelaev16040381m X. laevis.S
JGI 7.1 Xetro.B00264.1 X. tropicalis
JGI 7.1 Xetro.B00264.3 X. tropicalis
JGI 7.1 Xetro.B00264.4 X. tropicalis
JGI 7.1 Xetro.B00264.5 X. tropicalis
JGI 7.1 Xetro.B00264.6 X. tropicalis
JGI 7.1 Xetro.B00264.2 X. tropicalis
JGI 6.0 XeXenL6RMv10025296m X. laevis.S
JGI 6.0 XeXenL6RMv10032665m X. laevis.S
JGI 4.1 gw1.552.3.1 X. tropicalis
JGI 4.1 e_gw1.552.46.1 X. tropicalis
JGI 4.1 e_gw1.552.47.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000057912 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_5520007 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_5520021 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_5520012 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_552000007 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_552000021 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_552000022 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_552000010 X. tropicalis
JGI 4.1 e_gw1.552.3.1 X. tropicalis
JGI 4.1 gw1.552.46.1 X. tropicalis
JGI 4.1 gw1.552.47.1 X. tropicalis

mRNAs from cDNA libraries (14)

Clone Accession Species Library Anatomy Stage
THdA035f15 CT485781 X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:6992116 BC075547 X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
TEgg056h03 CR761240 X. tropicalis
NM_001004987 X. tropicalis
XM_041582992 X. laevis.S
XM_018246790 X. laevis.L
NM_001087277 X. laevis.S
XM_041582993 X. laevis.S
XM_018246793 X. laevis.L
IMAGE:5570143 BC045236 X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
XM_018246792 X. laevis.L
XM_041582182 X. laevis.L
IMAGE:6318053 BC071052 X. laevis.L
XM_018246791 X. laevis.L

ESTs (139)

100 ESTs displayed. View all

Clone Accession 5'/3' Species Library Anatomy Stage
TTbA065m23 CR435568 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:8963591 EL653454 5' X. tropicalis NICHD_XGC_tropInt_66 intestine unspecified stage
TTbA057a11 CR446425 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
THdA035f15 CR568134 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:5309332 BQ392288 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:7602166 CX365825 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTpA055i02 BX719253 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA078j10 BX729116 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:8890374 EL850033 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8884230 EL840136 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
XZT10905 CX310824 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7586294 CX319735 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7790538 CX324303 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
xthr05P24 CN120919 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGE:8918394 EL832049 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8859654 EL824174 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8853941 EL815364 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8874920 EL766210 5' X. tropicalis NICHD_XGC_tropPanc1 pancreas frog
TGas100c04 AL965113 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas120b08 AL967171 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:8964418 EL656860 5' X. tropicalis NICHD_XGC_tropInt_66 intestine unspecified stage
IMAGE:8960827 EL658812 5' X. tropicalis NICHD_XGC_tropInt_63 intestine unspecified stage
IMAGE:7521045 CX469149 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:8963281 EL660208 5' X. tropicalis NICHD_XGC_tropInt_66 intestine unspecified stage
IMAGE:7546259 CX499354 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:8957299 EL663065 5' X. tropicalis NICHD_XGC_tropInt_63 intestine unspecified stage
IMAGE:7546752 CX500441 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:8945027 EG653454 5' X. tropicalis NICHD_XGC_tropInt_54 intestine frog
IMAGE:8945847 EG651919 5' X. tropicalis NICHD_XGC_tropInt_54 intestine frog
IMAGE:8943325 EG650783 5' X. tropicalis NICHD_XGC_tropInt_54 intestine frog
IMAGE:7801269 DR834508 5' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:8909339 EL804336 5' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
IMAGE:7740013 DN029594 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7739433 DN028856 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7703300 CX939288 5' X. tropicalis NIH_XGC_tropTe5 testis frog
CAAO3528 CX933915 5' X. tropicalis NIH_XGC_tropTe5 testis frog
CAAO2490 CX932722 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7687377 CX908926 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7661756 CX843337 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:6995693 CF239132 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:9013733 EL859820 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:6992116 CF264240 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
xtbs19E08 CN081318 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs16J08 CN079678 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs14H16 CN078370 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs04O07 CN073841 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7609086 CX410191 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7637711 CX407701 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
XZT3952 CX399649 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7610682 CX377338 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:9011874 EL857424 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:5379266 BQ522995 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:7801269 DR834507 3' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:8909339 EL804337 3' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
IMAGE:5309332 BQ392287 3' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
TGas120b08 BX757090 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7521045 CX469148 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7546259 CX499353 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7546752 CX500440 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:6992116 CF264239 3' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:5379266 BQ522994 3' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
TTbA065m23 CR435569 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
THdA035f15 CR568135 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTpA078j10 BX729117 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
XZT10905 CX310823 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7602166 CX365824 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7610682 CX377337 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
XZT3952 CX399648 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7609086 DR894910 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
xtbs04O07 CN073840 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs14H16 CN078369 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs16J08 CN079677 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs19E08 CN081317 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7661756 CX843336 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7687377 CX908925 3' X. tropicalis NIH_XGC_tropTe4 testis frog
CAAO2490 CX932721 3' X. tropicalis NIH_XGC_tropTe5 testis frog
CAAO3528 CX933914 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7703300 CX939287 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7739433 DN028855 3' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7740013 DN029593 3' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:8874920 EL766209 3' X. tropicalis NICHD_XGC_tropPanc1 pancreas frog
IMAGE:8853941 EL815365 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8918394 EL832050 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8884230 EL840137 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8890374 EL850034 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:9011874 EL857425 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:9013733 EL859821 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
XL065n10 BJ060459 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:8738452 EE331656 5' X. laevis.S NICHD_XGC_panc pancreas frog
XL185g13 BJ618524 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:5570143 BQ736638 5' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
XL174j06 BJ615804 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:3549263 BG578221 5' X. laevis.S Wellcome CRC pRN3 St19 26 whole organism NF stage 19 to NF stage 26
XL095m03 BJ071868 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:7981558 DR729764 5' X. laevis.S NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
XL514g06ex BP705264 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGE:7982082 DR721704 5' X. laevis.S NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
XL448e12ex BP685149 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL439l10ex BP682098 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5