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Summary Expression Phenotypes Gene Literature (4) GO Terms (5) Nucleotides (88) Proteins (60) Interactants (163) Wiki
XB-GENEPAGE-488738

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for hdac9 - All

RefSeq mRNAs(4)
Models - Gene (22)
Models - mRNA (33)
mRNAs (14)
ESTs (5)

RefSeq mRNAs (4)

Accession Version name Length Protein Species
NM_001085838 histone deacetylase 9 4435 bp NP_001079307 X. laevis.S
XM_041565959 XP_041421893.1 histone deacetylase 9-like isoform X2 2693 bp XP_041421893 X. laevis.L
XM_041565960 XP_041421894.1 histone deacetylase 9-like isoform X4 2630 bp XP_041421894 X. laevis.L
XM_041567066 XP_041423000.1 histone deacetylase 9 isoform X2 3758 bp XP_041423000 X. laevis.S

Models - Gene (22)

Source Version Model Species
NCBI 10.0 XBXT10g009026 X. tropicalis
NCBI 10.1 XBXL10_1g28921 X. laevis.S
NCBI 10.1 XBXL10_1g27021 X. laevis.L
ENSEMBL 10.0 hdac9 X. tropicalis
JGI 9.1 Xelaev18033026m.g X. laevis.S
JGI 9.1 Xelaev18030959m.g X. laevis.L
Xenbase 9.1 gene33938 X. tropicalis
Xenbase 9.2 gene44730 X. laevis.S
Xenbase 9.2 gene37537 X. laevis.L
ENSEMBL 9.1 hdac9 X. tropicalis
JGI 8.0 Xetrov14026939m.g X. tropicalis
JGI 7.1 Xetro.F01398 X. tropicalis
JGI 7.2 Xelaev16062928m.g X. laevis.S
JGI 6.0 XeXenL6RMv10048499m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000013445 X. tropicalis
JGI 4.1 e_gw1.52.116.1 X. tropicalis
JGI 4.1 e_gw1.52.134.1 X. tropicalis
JGI 4.1 e_gw1.52.164.1 X. tropicalis
JGI 4.1 gw1.52.116.1 X. tropicalis
JGI 4.1 gw1.52.134.1 X. tropicalis
JGI 4.1 gw1.52.164.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_52000040 X. tropicalis

mRNAs based on gene models(33)

Source Version Model Species
NCBI 10.0 mRNA044715 X. tropicalis
NCBI 10.1 XBmRNA50623 X. laevis.L
NCBI 10.1 XBmRNA54407 X. laevis.S
ENSEMBL 10.0 ENSXETT00000103531 X. tropicalis
ENSEMBL 10.0 ENSXETT00000069235 X. tropicalis
ENSEMBL 10.0 ENSXETT00000089241 X. tropicalis
ENSEMBL 10.0 ENSXETT00000089286 X. tropicalis
ENSEMBL 10.0 ENSXETT00000029457 X. tropicalis
JGI 9.1 Xelaev18030959m X. laevis.L
JGI 9.1 Xelaev18033026m X. laevis.S
Xenbase 9.1 rna63911 X. tropicalis
Xenbase 9.2 rna78286 X. laevis.L
Xenbase 9.2 rna88759 X. laevis.S
ENSEMBL 9.1 ENSXETT00000029457 X. tropicalis
ENSEMBL 9.1 ENSXETT00000103531 X. tropicalis
ENSEMBL 9.1 ENSXETT00000069235 X. tropicalis
ENSEMBL 9.1 ENSXETT00000089286 X. tropicalis
ENSEMBL 9.1 ENSXETT00000080644 X. tropicalis
ENSEMBL 9.1 ENSXETT00000098820 X. tropicalis
ENSEMBL 9.1 ENSXETT00000089241 X. tropicalis
JGI 8.0 Xetrov14026939m X. tropicalis
JGI 7.1 Xetro.F01398.2 X. tropicalis
JGI 7.1 Xetro.F01398.1 X. tropicalis
JGI 7.2 Xelaev16062928m X. laevis.S
JGI 6.0 XeXenL6RMv10048499m X. laevis.S
JGI 4.1 e_gw1.52.116.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000029457 X. tropicalis
JGI 4.1 e_gw1.52.134.1 X. tropicalis
JGI 4.1 e_gw1.52.164.1 X. tropicalis
JGI 4.1 gw1.52.116.1 X. tropicalis
JGI 4.1 gw1.52.134.1 X. tropicalis
JGI 4.1 gw1.52.164.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_52000040 X. tropicalis

mRNAs from cDNA libraries (14)

Clone Accession Species Library Anatomy Stage
XM_002933292 X. tropicalis
XM_004915413 X. tropicalis
XM_031903790 X. tropicalis
XM_031903789 X. tropicalis
Z97214 X. laevis.S
NM_001085838 X. laevis.S
IMAGE:9093889 BC170504 X. laevis.S
IMAGE:9093886 BC170501 X. laevis.S
XM_018268554 X. laevis.S
XM_018267378 X. laevis.L
XM_018267376 X. laevis.L
XM_041567066 X. laevis.S
XM_041565960 X. laevis.L
XM_041565959 X. laevis.L

ESTs (5)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7847452 DT531700 5' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7690980 CX915717 5' X. tropicalis NIH_XGC_tropTe4 testis frog
xl284n06 DC118856 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
IMAGE:3379200 BF048780 5' X. laevis.S Wellcome CRC pSK egg egg unfertilized egg stage
rxl284n06 DC084142 3' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15