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Summary Expression Phenotypes Gene Literature (3) GO Terms (30) Nucleotides (234) Proteins (109) Interactants (103) Wiki
XB-GENEPAGE-487269

Show:     All X. tropicalis X. laevis

Nucleotide sequences for syngap1 - All

RefSeq mRNAs(42)
Models - Gene (23)
Models - mRNA (36)
mRNAs (44)
ESTs (69)

RefSeq mRNAs (42)

Accession Version Protein Name Length Protein Species
XM_031892369 XM_031892369.1 XP_031748229.1 ras/Rap GTPase-activating protein SynGAP isoform X1 6894 bp XP_031748229 X. tropicalis
XM_031892370 XM_031892370.1 XP_031748230.1 ras/Rap GTPase-activating protein SynGAP isoform X2 6898 bp XP_031748230 X. tropicalis
XM_031892371 XM_031892371.1 XP_031748231.1 ras/Rap GTPase-activating protein SynGAP isoform X3 6888 bp XP_031748231 X. tropicalis
XM_031892372 XM_031892372.1 XP_031748232.1 ras/Rap GTPase-activating protein SynGAP isoform X4 6885 bp XP_031748232 X. tropicalis
XM_031892373 XM_031892373.1 XP_031748233.1 ras/Rap GTPase-activating protein SynGAP isoform X5 6885 bp XP_031748233 X. tropicalis
XM_031892374 XM_031892374.1 XP_031748234.1 ras/Rap GTPase-activating protein SynGAP isoform X6 6902 bp XP_031748234 X. tropicalis
XM_031892375 XM_031892375.1 XP_031748235.1 ras/Rap GTPase-activating protein SynGAP isoform X7 6268 bp XP_031748235 X. tropicalis
XM_031892377 XM_031892377.1 XP_031748237.1 ras/Rap GTPase-activating protein SynGAP isoform X7 6240 bp XP_031748237 X. tropicalis
XM_031892378 XM_031892378.1 XP_031748238.1 ras/Rap GTPase-activating protein SynGAP isoform X8 5990 bp XP_031748238 X. tropicalis
XM_031892379 XM_031892379.1 XP_031748239.1 ras/Rap GTPase-activating protein SynGAP isoform X9 5980 bp XP_031748239 X. tropicalis
XM_031892380 XM_031892380.1 XP_031748240.1 ras/Rap GTPase-activating protein SynGAP isoform X10 6723 bp XP_031748240 X. tropicalis
XM_031892381 XM_031892381.1 XP_031748241.1 ras/Rap GTPase-activating protein SynGAP isoform X11 6720 bp XP_031748241 X. tropicalis
XM_031892382 XM_031892382.1 XP_031748242.1 ras/Rap GTPase-activating protein SynGAP isoform X12 8033 bp XP_031748242 X. tropicalis
XM_031892383 XM_031892383.1 XP_031748243.1 ras/Rap GTPase-activating protein SynGAP isoform X13 8023 bp XP_031748243 X. tropicalis
XM_031892384 XM_031892384.1 XP_031748244.1 ras/Rap GTPase-activating protein SynGAP isoform X14 6004 bp XP_031748244 X. tropicalis
XM_031892385 XM_031892385.1 XP_031748245.1 ras/Rap GTPase-activating protein SynGAP isoform X15 6430 bp XP_031748245 X. tropicalis
XM_041572834 XM_041572834.1 XP_041428768.1 ras/Rap GTPase-activating protein SynGAP isoform X1 4024 bp XP_041428768 X. laevis.L
XM_041572835 XM_041572835.1 XP_041428769.1 ras/Rap GTPase-activating protein SynGAP isoform X2 4020 bp XP_041428769 X. laevis.L
XM_041572836 XM_041572836.1 XP_041428770.1 ras/Rap GTPase-activating protein SynGAP isoform X3 4530 bp XP_041428770 X. laevis.L
XM_041572837 XM_041572837.1 XP_041428771.1 ras/Rap GTPase-activating protein SynGAP isoform X4 4011 bp XP_041428771 X. laevis.L
XM_041572838 XM_041572838.1 ras/Rap GTPase-activating protein SynGAP isoform X5 4586 bp XP_041428772 X. laevis.L
XM_041572839 XM_041572839.1 XP_041428773.1 ras/Rap GTPase-activating protein SynGAP isoform X5 4012 bp XP_041428773 X. laevis.L
XM_041572840 XM_041572840.1 XP_041428774.1 ras/Rap GTPase-activating protein SynGAP isoform X6 3993 bp XP_041428774 X. laevis.L
XM_041572841 XM_041572841.1 XP_041428775.1 ras/Rap GTPase-activating protein SynGAP isoform X7 4003 bp XP_041428775 X. laevis.L
XM_041572842 XM_041572842.1 XP_041428776.1 ras/Rap GTPase-activating protein SynGAP isoform X8 3990 bp XP_041428776 X. laevis.L
XM_041572843 XM_041572843.1 XP_041428777.1 ras/Rap GTPase-activating protein SynGAP isoform X9 5356 bp XP_041428777 X. laevis.L
XM_041572844 XM_041572844.1 XP_041428778.1 ras/Rap GTPase-activating protein SynGAP isoform X10 3995 bp XP_041428778 X. laevis.L
XM_041572845 XM_041572845.1 XP_041428779.1 ras/Rap GTPase-activating protein SynGAP isoform X11 3739 bp XP_041428779 X. laevis.L
XM_041572846 XM_041572846.1 XP_041428780.1 ras/Rap GTPase-activating protein SynGAP isoform X12 3703 bp XP_041428780 X. laevis.L
XM_041572847 XM_041572847.1 XP_041428781.1 ras/Rap GTPase-activating protein SynGAP isoform X13 3700 bp XP_041428781 X. laevis.L
XM_041572848 XM_041572848.1 XP_041428782.1 ras/Rap GTPase-activating protein SynGAP isoform X14 3673 bp XP_041428782 X. laevis.L
XM_041572849 XM_041572849.1 XP_041428783.1 ras/Rap GTPase-activating protein SynGAP isoform X15 4081 bp XP_041428783 X. laevis.L
XM_041572850 XM_041572850.1 XP_041428784.1 ras/Rap GTPase-activating protein SynGAP isoform X16 3433 bp XP_041428784 X. laevis.L
XM_041575202 XM_041575202.1 XP_041431136.1 ras/Rap GTPase-activating protein SynGAP isoform X1 3858 bp XP_041431136 X. laevis.S
XM_041575203 XM_041575203.1 XP_041431137.1 ras/Rap GTPase-activating protein SynGAP isoform X2 4389 bp XP_041431137 X. laevis.S
XM_041575204 XM_041575204.1 XP_041431138.1 ras/Rap GTPase-activating protein SynGAP isoform X3 3855 bp XP_041431138 X. laevis.S
XM_041575205 XM_041575205.1 XP_041431139.1 ras/Rap GTPase-activating protein SynGAP isoform X4 3865 bp XP_041431139 X. laevis.S
XM_041575206 XM_041575206.1 XP_041431140.1 ras/Rap GTPase-activating protein SynGAP isoform X5 4445 bp XP_041431140 X. laevis.S
XM_041575207 XM_041575207.1 XP_041431141.1 ras/Rap GTPase-activating protein SynGAP isoform X6 3867 bp XP_041431141 X. laevis.S
XM_041575209 XM_041575209.1 XP_041431143.1 ras/Rap GTPase-activating protein SynGAP isoform X7 3912 bp XP_041431143 X. laevis.S
XM_041575210 XM_041575210.1 XP_041431144.1 ras/Rap GTPase-activating protein SynGAP isoform X8 3708 bp XP_041431144 X. laevis.S
XM_041575211 XM_041575211.1 XP_041431145.1 ras/Rap GTPase-activating protein SynGAP isoform X8 3765 bp XP_041431145 X. laevis.S

Models - Gene (23)

Source Version Model Species
NCBI 10.1 XBXL10_1g35399 X. laevis.L
NCBI 10.1 XBXL10_1g38243 X. laevis.S
NCBI 10.0 XBXT10g010679 X. tropicalis
ENSEMBL 10.0 syngap1 X. tropicalis
Xenbase 9.2 gene16786 X. laevis.S
JGI 9.1 Xelaev18042411m.g X. laevis.S
Xenbase 9.1 gene30324 X. tropicalis
ENSEMBL 9.1 syngap1 X. tropicalis
JGI 7.1 Xetro.H01012 X. tropicalis
JGI 6.0 XeXenL6RMv10023342m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000020358 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_396000042 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3960042 X. tropicalis
JGI 4.1 e_gw1.396.114.1 X. tropicalis
JGI 4.1 e_gw1.396.20.1 X. tropicalis
JGI 4.1 gw1.396.114.1 X. tropicalis
JGI 4.1 gw1.396.19.1 X. tropicalis
JGI 4.1 gw1.396.20.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_3960023 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3960019 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3960020 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3960114 X. tropicalis
JGI 4.1 e_gw1.396.19.1 X. tropicalis

mRNAs based on gene models(36)

Source Version Model Species
NCBI 10.1 XBmRNA66827 X. laevis.L
NCBI 10.1 XBmRNA72248 X. laevis.S
ENSEMBL 10.0 ENSXETT00000098324 X. tropicalis
ENSEMBL 10.0 ENSXETT00000098629 X. tropicalis
ENSEMBL 10.0 ENSXETT00000079306 X. tropicalis
ENSEMBL 10.0 ENSXETT00000043913 X. tropicalis
NCBI 10.0 mRNA052834 X. tropicalis
ENSEMBL 10.0 ENSXETT00000086443 X. tropicalis
Xenbase 9.2 rna49050 X. laevis.S
ENSEMBL 9.1 ENSXETT00000098629 X. tropicalis
ENSEMBL 9.1 ENSXETT00000104012 X. tropicalis
JGI 9.1 Xelaev18042411m X. laevis.S
ENSEMBL 9.1 ENSXETT00000001462 X. tropicalis
ENSEMBL 9.1 ENSXETT00000043913 X. tropicalis
ENSEMBL 9.1 ENSXETT00000074269 X. tropicalis
ENSEMBL 9.1 ENSXETT00000077501 X. tropicalis
ENSEMBL 9.1 ENSXETT00000079306 X. tropicalis
ENSEMBL 9.1 ENSXETT00000082725 X. tropicalis
ENSEMBL 9.1 ENSXETT00000086443 X. tropicalis
ENSEMBL 9.1 ENSXETT00000098324 X. tropicalis
Xenbase 9.1 rna58067 X. tropicalis
JGI 7.1 Xetro.H01012.1 X. tropicalis
JGI 6.0 XeXenL6RMv10023342m X. laevis.L
JGI 4.1 estExt_Genewise1.C_3960114 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_396000042 X. tropicalis
JGI 4.1 gw1.396.114.1 X. tropicalis
JGI 4.1 gw1.396.19.1 X. tropicalis
JGI 4.1 gw1.396.20.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3960042 X. tropicalis
JGI 4.1 e_gw1.396.114.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000043913 X. tropicalis
JGI 4.1 e_gw1.396.20.1 X. tropicalis
JGI 4.1 e_gw1.396.19.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3960019 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_3960023 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3960020 X. tropicalis

mRNAs from cDNA libraries (44)

Clone Accession Species Library Anatomy Stage
IMAGE:7649664 BC168473 X. tropicalis NIH_XGC_tropBrn2 brain frog
NM_001134816 X. tropicalis
XM_031892369 X. tropicalis
XM_031892370 X. tropicalis
XM_031892371 X. tropicalis
XM_031892372 X. tropicalis
XM_031892373 X. tropicalis
XM_031892374 X. tropicalis
XM_031892375 X. tropicalis
XM_031892377 X. tropicalis
XM_031892378 X. tropicalis
XM_031892379 X. tropicalis
XM_031892380 X. tropicalis
XM_031892381 X. tropicalis
XM_031892382 X. tropicalis
XM_031892383 X. tropicalis
XM_031892384 X. tropicalis
XM_031892385 X. tropicalis
XM_041572834 X. laevis.L
XM_041572835 X. laevis.L
XM_041572836 X. laevis.L
XM_041572837 X. laevis.L
XM_041572838 X. laevis.L
XM_041572839 X. laevis.L
XM_041572840 X. laevis.L
XM_041572841 X. laevis.L
XM_041572842 X. laevis.L
XM_041572843 X. laevis.L
XM_041572844 X. laevis.L
XM_041572845 X. laevis.L
XM_041572846 X. laevis.L
XM_041572847 X. laevis.L
XM_041572848 X. laevis.L
XM_041572849 X. laevis.L
XM_041572850 X. laevis.L
XM_041575202 X. laevis.S
XM_041575203 X. laevis.S
XM_041575204 X. laevis.S
XM_041575205 X. laevis.S
XM_041575206 X. laevis.S
XM_041575207 X. laevis.S
XM_041575209 X. laevis.S
XM_041575210 X. laevis.S
XM_041575211 X. laevis.S

ESTs (69)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7642130 CX796499 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7651127 CX812659 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7644066 CX800023 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7651646 CX813589 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7641150 CX794977 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7652909 CX820423 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7644651 CX800780 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7653258 CX821595 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7644777 CX800997 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7654519 CX823499 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7642695 CX797452 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7658501 CX837385 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7645543 CX802358 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7658556 CX837786 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7641135 CX794873 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7658514 CX837828 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7645775 CX802979 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7660371 CX840909 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7644131 CX799471 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7661317 CX842241 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7646548 CX804713 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7663343 CX845871 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7641926 CX796412 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7687327 CX908908 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7649664 CX810146 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7689995 CX914107 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7644013 CX799653 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7692463 CX918178 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7608489 CX409598 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7650336 CX811494 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7643958 CX799935 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7650853 CX811760 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
xtbs35P08 CN091955 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7650997 DR831686 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7660800 DR831730 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
xtbs35P08 CN091954 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7689995 CX914106 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7641135 CX794872 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7641150 CX794976 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7641926 CX796411 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7642130 CX796498 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7642695 CX797451 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7644131 CX799470 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7644013 CX799652 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7643958 CX799934 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7644066 CX800022 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7644651 CX800779 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7645543 CX802357 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7645775 CX802978 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7646548 CX804712 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7649664 CX810145 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7650359 CX811330 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7650336 CX811493 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7650853 CX811759 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7651127 CX812658 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7651646 CX813588 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7652909 CX820422 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7653258 CX821594 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7654519 CX823498 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7658501 CX837384 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7658556 CX837785 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7658514 CX837827 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7660371 CX840908 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7661317 CX842240 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7663343 CX845870 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7687327 CX908907 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7608489 CX409597 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7692463 CX918177 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7640723 DR831621 3' X. tropicalis NIH_XGC_tropBrn2 brain frog