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Summary Expression Phenotypes Gene Literature (8) GO Terms (6) Nucleotides (98) Proteins (57) Interactants (155) Wiki
XB-GENEPAGE-484591

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for cdh6 - All

RefSeq mRNAs(7)
Models - Gene (24)
Models - mRNA (34)
mRNAs (11)
ESTs (13)

RefSeq mRNAs (7)

Accession Version Protein Name Length Protein Species
XM_004915314 XM_004915314.3 cadherin-6 4037 bp XP_004915371 X. tropicalis
XM_002935581 cadherin-6 4091 bp XP_002935627 X. tropicalis
NM_001085625 NM_001085625.1 cadherin 6 L homeolog precursor 2485 bp NP_001079094 X. laevis.L
XM_041565227 XM_041565227.1 XP_041421161.1 cadherin 6 L homeolog isoform X1 4039 bp XP_041421161 X. laevis.L
XM_041565228 XM_041565228.1 XP_041421162.1 cadherin 6 L homeolog isoform X1 4090 bp XP_041421162 X. laevis.L
XM_018266183 XM_018266183.2 cadherin 6 L homeolog isoform X1 3919 bp XP_018121672 X. laevis.L
XM_018269492 XM_018269492.2 cadherin-6 4013 bp XP_018124981 X. laevis.S

Models - Gene (24)

Source Version Model Species
NCBI 10.0 XBXT10g016717 X. tropicalis
NCBI 10.1 XBXL10_1g27532 X. laevis.L
NCBI 10.1 XBXL10_1g29250 X. laevis.S
ENSEMBL 10.0 cdh6 X. tropicalis
JGI 9.1 Xelaev18031526m.g X. laevis.L
JGI 9.1 Xelaev18033473m.g X. laevis.S
Xenbase 9.1 gene1483 X. tropicalis
Xenbase 9.2 gene127 X. laevis.L
Xenbase 9.2 gene5065 X. laevis.S
ENSEMBL 9.1 cdh6 X. tropicalis
JGI 8.0 Xetrov14026640m.g X. tropicalis
JGI 7.1 Xetro.F00892 X. tropicalis
JGI 7.2 Xelaev16066896m.g X. laevis.L
JGI 6.0 XeXenL6RMv10014562m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000016687 X. tropicalis
JGI 4.1 C_scaffold_157000003 X. tropicalis
JGI 4.1 gw1.157.66.1 X. tropicalis
JGI 4.1 gw1.157.67.1 X. tropicalis
JGI 4.1 gw1.157.77.1 X. tropicalis
JGI 4.1 e_gw1.157.66.1 X. tropicalis
JGI 4.1 e_gw1.157.67.1 X. tropicalis
JGI 4.1 e_gw1.157.77.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_157000012 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_157000002 X. tropicalis

mRNAs based on gene models(34)

Source Version Model Species
NCBI 10.0 mRNA082755 X. tropicalis
NCBI 10.1 XBmRNA51630 X. laevis.L
NCBI 10.1 XBmRNA54969 X. laevis.S
ENSEMBL 10.0 ENSXETT00000098904 X. tropicalis
JGI 9.1 Xelaev18031526m X. laevis.L
JGI 9.1 Xelaev18033473m X. laevis.S
Xenbase 9.1 rna4788 X. tropicalis
Xenbase 9.2 rna352 X. laevis.L
Xenbase 9.2 rna14796 X. laevis.S
ENSEMBL 9.1 ENSXETT00000096969 X. tropicalis
ENSEMBL 9.1 ENSXETT00000080505 X. tropicalis
ENSEMBL 9.1 ENSXETT00000036395 X. tropicalis
ENSEMBL 9.1 ENSXETT00000080679 X. tropicalis
ENSEMBL 9.1 ENSXETT00000077612 X. tropicalis
ENSEMBL 9.1 ENSXETT00000068315 X. tropicalis
ENSEMBL 9.1 ENSXETT00000098904 X. tropicalis
ENSEMBL 9.1 ENSXETT00000104534 X. tropicalis
ENSEMBL 9.1 ENSXETT00000077484 X. tropicalis
ENSEMBL 9.1 ENSXETT00000085848 X. tropicalis
JGI 8.0 Xetrov14026640m X. tropicalis
JGI 7.1 Xetro.F00892.1 X. tropicalis
JGI 7.1 Xetro.F00892.2 X. tropicalis
JGI 7.2 Xelaev16066896m X. laevis.L
JGI 6.0 XeXenL6RMv10014562m X. laevis.L
JGI 4.1 C_scaffold_157000003 X. tropicalis
ENSEMBL 4.1 ENSXETT00000036395 X. tropicalis
JGI 4.1 e_gw1.157.66.1 X. tropicalis
JGI 4.1 e_gw1.157.67.1 X. tropicalis
JGI 4.1 e_gw1.157.77.1 X. tropicalis
JGI 4.1 gw1.157.66.1 X. tropicalis
JGI 4.1 gw1.157.67.1 X. tropicalis
JGI 4.1 gw1.157.77.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_157000012 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_157000002 X. tropicalis

mRNAs from cDNA libraries (11)

Clone Accession Species Library Anatomy Stage
XM_002935581 X. tropicalis
XM_004915314 X. tropicalis
AF263273 X. laevis.L
AF263272 X. laevis.L
NM_001085625 X. laevis.L
IMAGE:9041477 BC169843 X. laevis.L
IMAGE:9041479 BC169845 X. laevis.L
XM_018269492 X. laevis.S
XM_018266183 X. laevis.L
XM_041565228 X. laevis.L
XM_041565227 X. laevis.L

ESTs (13)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7584455 CX415331 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7666951 CX853325 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7591949 CX325464 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7619557 CX346660 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
XZT108 CX358567 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
xtbs21D16 CN082848 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:8966800 EL661635 5' X. tropicalis NICHD_XGC_tropInt_66 intestine unspecified stage
THdA053k11 CR582642 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7584455 CX415330 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7666951 CX853324 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7591949 CX325463 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
xtbs21D16 CN082847 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7619557 CX346659 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41