Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Phenotypes Gene Literature (87) GO Terms (0) Nucleotides (108) Proteins (51) Interactants (216) Wiki
XB-GENEPAGE-484206

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for vsig1 - All

RefSeq mRNAs(3)
Models - Gene (29)
Models - mRNA (31)
mRNAs (9)
ESTs (11)

RefSeq mRNAs (3)

Accession Version name Length Protein Species
NM_001112909 NM_001112909.1 V-set and immunoglobulin domain-containing protein 1 precursor 2724 bp NP_001106380 X. tropicalis
NM_001085806 NM_001085806.1 V-set and immunoglobulin domain-containing protein 1 precursor 3135 bp NP_001079275 X. laevis.L
XM_041571889 XM_041571889.1 XP_041427823.1 V-set and immunoglobulin domain-containing protein 1 isoform X1 1345 bp XP_041427823 X. laevis.L

Models - Gene (29)

Source Version Model Species
NCBI 10.0 XBXT10g019593 X. tropicalis
NCBI 10.1 XBXL10_1g35110 X. laevis.L
NCBI 10.1 XBXL10_1g37992 X. laevis.S
ENSEMBL 10.0 vsig1 X. tropicalis
JGI 9.1 Xelaev18038822m.g X. laevis.L
JGI 9.1 Xelaev18042145m.g X. laevis.S
Xenbase 9.1 gene25917 X. tropicalis
Xenbase 9.2 gene9886 X. laevis.L
Xenbase 9.2 gene41302 X. laevis.S
ENSEMBL 9.1 vsig1 X. tropicalis
JGI 8.0 Xetrov14033275m.g X. tropicalis
JGI 7.1 Xetro.H00607 X. tropicalis
JGI 7.2 Xelaev16019107m.g X. laevis.L
JGI 6.0 XeXenL6RMv10047784m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000012851 X. tropicalis
JGI 4.1 e_gw1.407.39.1 X. tropicalis
JGI 4.1 e_gw1.407.43.1 X. tropicalis
JGI 4.1 e_gw1.407.44.1 X. tropicalis
JGI 4.1 e_gw1.407.45.1 X. tropicalis
JGI 4.1 gw1.407.39.1 X. tropicalis
JGI 4.1 gw1.407.43.1 X. tropicalis
JGI 4.1 gw1.407.44.1 X. tropicalis
JGI 4.1 gw1.407.45.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_4070015 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4070039 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_4070020 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_4070009 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_407000020 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_407000009 X. tropicalis

mRNAs based on gene models(31)

Source Version Model Species
NCBI 10.0 mRNA096740 X. tropicalis
NCBI 10.1 XBmRNA66325 X. laevis.L
NCBI 10.1 XBmRNA71811 X. laevis.S
ENSEMBL 10.0 ENSXETT00000052801 X. tropicalis
ENSEMBL 10.0 ENSXETT00000028082 X. tropicalis
JGI 9.1 Xelaev18038822m X. laevis.L
JGI 9.1 Xelaev18042145m X. laevis.S
Xenbase 9.1 rna51078 X. tropicalis
Xenbase 9.2 rna28743 X. laevis.L
Xenbase 9.2 rna83703 X. laevis.S
ENSEMBL 9.1 ENSXETT00000052801 X. tropicalis
ENSEMBL 9.1 ENSXETT00000028082 X. tropicalis
JGI 8.0 Xetrov14033275m X. tropicalis
JGI 7.1 Xetro.H00607.1 X. tropicalis
JGI 7.2 Xelaev16019107m X. laevis.L
JGI 6.0 XeXenL6RMv10047784m X. laevis.L
JGI 4.1 e_gw1.407.39.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000028082 X. tropicalis
JGI 4.1 e_gw1.407.43.1 X. tropicalis
JGI 4.1 e_gw1.407.44.1 X. tropicalis
JGI 4.1 e_gw1.407.45.1 X. tropicalis
JGI 4.1 gw1.407.39.1 X. tropicalis
JGI 4.1 gw1.407.43.1 X. tropicalis
JGI 4.1 gw1.407.44.1 X. tropicalis
JGI 4.1 gw1.407.45.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_4070015 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4070039 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_4070020 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_4070009 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_407000020 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_407000009 X. tropicalis

mRNAs from cDNA libraries (9)

Clone Accession Species Library Anatomy Stage
IMAGE:8927510 BC154930 X. tropicalis NICHD_XGC_tropThy1 thymus frog
NM_001112909 X. tropicalis
XM_031906867 X. tropicalis
U43330 X. laevis.L
NM_001085806 X. laevis.L
IMAGE:9093594 BC170213 X. laevis.L
IMAGE:9093592 BC170211 X. laevis.L
XM_018232986 X. laevis.S
XM_041571889 X. laevis.L

ESTs (11)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8929455 EL678406 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:8929057 EL677601 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:8927510 EL675090 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:8925353 EL670793 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:8931513 EL666015 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
XZT11502 CX311747 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:8929455 EL678405 3' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:8929057 EL677600 3' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:8927510 EL675089 3' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:8925353 EL670792 3' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:8931513 EL666014 3' X. tropicalis NICHD_XGC_tropThy1 thymus frog