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Summary Expression Phenotypes Gene Literature (8) GO Terms (12) Nucleotides (513) Proteins (64) Interactants (226) Wiki
XB-GENEPAGE-483720

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for cdk9 - All

RefSeq mRNAs(10)
Models - Gene (34)
Models - mRNA (36)
mRNAs (14)
ESTs (364)

RefSeq mRNAs (10)

Accession Version Protein Name Length Protein Species
NM_001005448 NM_001005448.1 cyclin-dependent kinase 9 1802 bp NP_001005448 X. tropicalis
XM_012968192 XM_012968192.3 cyclin-dependent kinase 9 isoform X1 1831 bp XP_012823646 X. tropicalis
XM_012968193 XM_012968193.3 cyclin-dependent kinase 9 isoform X2 1801 bp XP_012823647 X. tropicalis
NM_001096560 NM_001096560.1 cyclin-dependent kinase 9-A 1858 bp NP_001090029 X. laevis.S
XM_041574331 XM_041574331.1 XP_041430265.1 cyclin-dependent kinase 9-A isoform X1 2027 bp XP_041430265 X. laevis.S
XM_041574332 XM_041574332.1 XP_041430266.1 cyclin-dependent kinase 9-A isoform X2 2018 bp XP_041430266 X. laevis.S
NM_001087068 NM_001087068.1 cyclin-dependent kinase 9-B 1836 bp NP_001080537 X. laevis.L
XM_041571921 XM_041571921.1 XP_041427855.1 cyclin-dependent kinase 9-B isoform X1 1863 bp XP_041427855 X. laevis.L
XM_041571922 XM_041571922.1 XP_041427856.1 cyclin-dependent kinase 9-B isoform X2 1853 bp XP_041427856 X. laevis.L
XM_041571923 XM_041571923.1 XP_041427857.1 cyclin-dependent kinase 9-B isoform X3 1836 bp XP_041427857 X. laevis.L

Models - Gene (34)

Source Version Model Species
NCBI 10.1 XBXL10_1g34580 X. laevis.L
NCBI 10.1 XBXL10_1g37706 X. laevis.S
NCBI 10.0 XBXT10g005040 X. tropicalis
ENSEMBL 10.0 cdk9 X. tropicalis
Xenbase 9.2 gene35538 X. laevis.S
Xenbase 9.2 gene5684 X. laevis.L
JGI 9.1 Xelaev18004133m.g X. laevis.L
JGI 9.1 Xelaev18041715m.g X. laevis.S
Xenbase 9.1 gene4464 X. tropicalis
ENSEMBL 9.1 cdk9 X. tropicalis
JGI 7.2 Xelaev16029729m.g X. laevis.S
JGI 7.2 Xelaev16034065m.g X. laevis.L
JGI 7.1 Xetro.H00240 X. tropicalis
JGI 6.0 XeXenL6RMv10002412m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000024742 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_154000030 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_1540030 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_154000088 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_154000037 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_154000087 X. tropicalis
JGI 4.1 gw1.154.230.1 X. tropicalis
JGI 4.1 gw1.154.231.1 X. tropicalis
JGI 4.1 gw1.154.64.1 X. tropicalis
JGI 4.1 e_gw1.154.230.1 X. tropicalis
JGI 4.1 e_gw1.154.231.1 X. tropicalis
JGI 4.1 e_gw1.154.64.1 X. tropicalis
JGI 4.1 FCO_estExt_fgenesh1_kg.C_1540030 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1540058 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1540064 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1540230 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1540231 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1540086 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1540087 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1540036 X. tropicalis

mRNAs based on gene models(36)

Source Version Model Species
NCBI 10.1 XBmRNA65334 X. laevis.L
NCBI 10.1 XBmRNA71257 X. laevis.S
ENSEMBL 10.0 ENSXETT00000031527 X. tropicalis
NCBI 10.0 mRNA025009 X. tropicalis
Xenbase 9.2 rna75547 X. laevis.S
Xenbase 9.2 rna16646 X. laevis.L
JGI 9.1 Xelaev18004133m X. laevis.L
Xenbase 9.1 rna14536 X. tropicalis
JGI 9.1 Xelaev18041715m X. laevis.S
ENSEMBL 9.1 ENSXETT00000031527 X. tropicalis
JGI 7.2 Xelaev16034065m X. laevis.L
JGI 7.2 Xelaev16029729m X. laevis.S
JGI 7.1 Xetro.H00240.2 X. tropicalis
JGI 7.1 Xetro.H00240.3 X. tropicalis
JGI 7.1 Xetro.H00240.1 X. tropicalis
JGI 6.0 XeXenL6RMv10002412m X. laevis.S
JGI 4.1 e_gw1.154.230.1 X. tropicalis
JGI 4.1 gw1.154.230.1 X. tropicalis
JGI 4.1 gw1.154.231.1 X. tropicalis
JGI 4.1 gw1.154.64.1 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_154000037 X. tropicalis
JGI 4.1 e_gw1.154.231.1 X. tropicalis
JGI 4.1 e_gw1.154.64.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000031527 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_1540030 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1540086 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1540087 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1540036 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1540058 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1540064 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1540230 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1540231 X. tropicalis
JGI 4.1 FCO_estExt_fgenesh1_kg.C_1540030 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_154000030 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_154000087 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_154000088 X. tropicalis

mRNAs from cDNA libraries (14)

Clone Accession Species Library Anatomy Stage
TGas123e01 CR762201 X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
XM_012968192 X. tropicalis
NM_001005448 X. tropicalis
IMAGE:5308541 BC074560 X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
XM_012968193 X. tropicalis
XM_041574331 X. laevis.S
XM_041571922 X. laevis.L
XM_041571923 X. laevis.L
IMAGE:5156812 BC097527 X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
XM_041574332 X. laevis.S
IMAGE:5542442 BC045247 X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
XM_041571921 X. laevis.L
NM_001087068 X. laevis.L
NM_001096560 X. laevis.S

ESTs (364)

100 ESTs displayed. View all

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7742365 DN033880 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7737689 DN025172 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7714058 CX972834 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
CAAO10602 CX959963 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7706889 CX959052 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7664595 CX849314 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
xtbs29E21 CN087742 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7637760 CX407961 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7631453 CX396502 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7615339 CX391273 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7598764 CX388249 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
XZT12613 CX321072 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7585525 CX318273 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7578337 CX416178 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7530408 CX419653 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TTpA052a20 BX733355 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7531600 CX421526 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7577124 CX422863 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
THdA047j10 CR589672 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7575670 CX430789 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
THdA048c24 CR588836 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7523615 CX437722 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7525995 CX443189 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7527069 CX444453 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
st16h15 DC167530 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7536766 CX445396 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
st33m07 DC172979 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7541384 CX448096 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
st33n07 DC172997 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7539797 CX452991 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
st5p16 DC174705 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7569738 CX453998 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7569027 CX457453 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
st60g22 DC181516 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7539846 CX461000 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
st64l23 DC182613 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7561747 CX465379 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
st75k16 DC185393 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7562343 CX465866 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
st102h01 DC191135 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7520657 CX468446 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
st102i01 DC191154 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7522511 CX471604 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
st105j16 DC191886 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7522988 CX472577 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
st107j16 DC193825 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7535128 CX476304 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
st107l21 DC193857 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7565598 CX482369 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7549023 CX483994 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
st112f11 DC195226 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7549116 CX484294 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
THdA022m20 CR587346 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7553253 CX491403 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
THdA044i06 CR583636 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7552472 CX495354 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:8864218 EL700903 5' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:7547293 CX500880 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:5308541 BQ390698 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:7567038 CX507737 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:6990175 CF218147 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:7567274 CX508057 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7550130 CX509149 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:6990175 CF218148 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:7560295 CX515820 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:6988061 CF220631 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:7560615 CX516371 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TNeu060j13 AL676589 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu052f17 AL673226 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu040d24 AL660942 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu012p17 AL639762 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:9020088 EL869599 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:7512978 CX742383 5' X. tropicalis NIH_XGC_tropGas6 whole organism NF stage 10 to NF stage 13
IMAGE:9018757 EL867435 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:7514721 CX744326 5' X. tropicalis NIH_XGC_tropGas6 whole organism NF stage 10 to NF stage 13
IMAGE:7030335 CF782787 5' X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
THdA041h24 CR583470 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA047j09 CR578079 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTbA034m20 CR443393 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA039c10 CR441730 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA059k18 CR432240 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA063a14 CR412806 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:6977014 CF224111 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:6977295 CF223732 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:6977295 CF150067 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:5384089 BQ396686 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:5382070 BQ393381 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
TNeu082f18 AL804624 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu116h22 AL794263 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu122a23 AL793622 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu098c22 AL790117 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu066f01 AL778437 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TGas003o08 AL593918 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas016j21 AL631370 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas051e13 AL673760 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas051e18 AL675968 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas063l14 AL679113 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas064l14 AL679292 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas054k17 AL680060 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12