Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Phenotypes Gene Literature (82) GO Terms (10) Nucleotides (60) Proteins (36) Interactants (422) Wiki
XB-GENEPAGE-483330

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for pdx1 - All

RefSeq mRNAs(1)
Models - Gene (25)
Models - mRNA (25)
mRNAs (3)
ESTs (1)

RefSeq mRNAs (1)

Accession Version name Length Protein Species
NM_001172211 pancreas/duodenum homeobox protein 1 816 bp NP_001165682 X. laevis.S

Models - Gene (25)

Source Version Model Species
NCBI 10.0 XBXT10g003586 X. tropicalis
NCBI 10.1 XBXL10_1g10981 X. laevis.S
NCBI 10.1 XBXL10_1g8402 X. laevis.L
ENSEMBL 10.0 pdx1 X. tropicalis
JGI 9.1 Xelaev18016204m.g X. laevis.S
JGI 9.1 Xelaev18013753m.g X. laevis.L
Xenbase 9.1 gene5556 X. tropicalis
Xenbase 9.2 gene7424 X. laevis.S
Xenbase 9.2 gene11658 X. laevis.L
ENSEMBL 9.1 pdx1 X. tropicalis
JGI 8.0 Xetrov14010652m.g X. tropicalis
JGI 7.1 Xetro.B01817 X. tropicalis
JGI 7.2 Xelaev16036346m.g X. laevis.S
JGI 6.0 XeXenL6RMv10014014m.g X. laevis.S
JGI 6.0 XeXenL6RMv10028960m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000011787 X. tropicalis
JGI 4.1 e_gw1.80.113.1 X. tropicalis
JGI 4.1 e_gw1.80.145.1 X. tropicalis
JGI 4.1 e_gw1.80.194.1 X. tropicalis
JGI 4.1 gw1.80.113.1 X. tropicalis
JGI 4.1 gw1.80.145.1 X. tropicalis
JGI 4.1 gw1.80.194.1 X. tropicalis
JGI 4.1 AMZ_530783 X. tropicalis
JGI 4.1 LAU_ensembl.C_scaffold_80000119 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_80000055 X. tropicalis

mRNAs based on gene models(25)

Source Version Model Species
NCBI 10.0 mRNA018140 X. tropicalis
NCBI 10.1 XBmRNA15913 X. laevis.L
NCBI 10.1 XBmRNA20646 X. laevis.S
ENSEMBL 10.0 ENSXETT00000025782 X. tropicalis
JGI 9.1 Xelaev18013753m X. laevis.L
JGI 9.1 Xelaev18016204m X. laevis.S
Xenbase 9.1 rna18013 X. tropicalis
Xenbase 9.2 rna33891 X. laevis.L
Xenbase 9.2 rna21630 X. laevis.S
ENSEMBL 9.1 ENSXETT00000025782 X. tropicalis
JGI 8.0 Xetrov14010652m X. tropicalis
JGI 7.1 Xetro.B01817.1 X. tropicalis
JGI 7.2 Xelaev16036346m X. laevis.S
JGI 6.0 XeXenL6RMv10014014m X. laevis.S
JGI 6.0 XeXenL6RMv10028960m X. laevis.S
JGI 4.1 e_gw1.80.113.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000025782 X. tropicalis
JGI 4.1 e_gw1.80.145.1 X. tropicalis
JGI 4.1 e_gw1.80.194.1 X. tropicalis
JGI 4.1 gw1.80.113.1 X. tropicalis
JGI 4.1 gw1.80.145.1 X. tropicalis
JGI 4.1 gw1.80.194.1 X. tropicalis
JGI 4.1 AMZ_530783 X. tropicalis
JGI 4.1 LAU_ensembl.C_scaffold_80000119 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_80000055 X. tropicalis

mRNAs from cDNA libraries (3)

Clone Accession Species Library Anatomy Stage
XM_002934019 X. tropicalis
NM_001172211 X. laevis.S
XM_018247708 X. laevis.L

ESTs (1)

Clone Accession 5'/3' Species Library Anatomy Stage
TNeu094c16 AL787245 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21