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Summary Expression Phenotypes Gene Literature (59) GO Terms (6) Nucleotides (140) Proteins (60) Interactants (657) Wiki
XB-GENEPAGE-482575

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for hoxb3 - All

RefSeq mRNAs(13)
Models - Gene (21)
Models - mRNA (29)
mRNAs (29)
ESTs (18)

RefSeq mRNAs (13)

Accession Version name Length Protein Species
NM_001015971 homeobox protein Hox-B3 1964 bp NP_001015971 X. tropicalis
XM_041578016 XP_041433950.1 homeobox protein Hox-B3a isoform X1 2925 bp XP_041433950 X. laevis.S
XM_041578017 XP_041433951.1 homeobox protein Hox-B3a isoform X1 2877 bp XP_041433951 X. laevis.S
XM_041578018 XP_041433952.1 homeobox protein Hox-B3a isoform X1 5284 bp XP_041433952 X. laevis.S
XM_041578019 XP_041433953.1 homeobox protein Hox-B3a isoform X1 2791 bp XP_041433953 X. laevis.S
XM_041578020 XP_041433954.1 homeobox protein Hox-B3a isoform X2 3665 bp XP_041433954 X. laevis.S
XM_018234765 PREDICTED: homeobox protein Hox-B3a-like 2140 bp XP_018090254 X. laevis.L
XM_018234766 PREDICTED: homeobox protein Hox-B3a-like 1734 bp XP_018090255 X. laevis.L
XM_018234768 PREDICTED: homeobox protein Hox-B3a-like 2934 bp XP_018090257 X. laevis.L
XM_018234773 PREDICTED: homeobox protein Hox-B3a-like 2364 bp XP_018090262 X. laevis.L
XM_018238026 PREDICTED: homeobox protein Hox-B3a-like isoform X1 2332 bp XP_018093515 X. laevis.S
XM_041578014 XP_041433948.1 homeobox protein Hox-B3a isoform X1 3662 bp XP_041433948 X. laevis.S
XM_041578015 XP_041433949.1 homeobox protein Hox-B3a isoform X1 5374 bp XP_041433949 X. laevis.S

Models - Gene (21)

Source Version Model Species
NCBI 10.0 XBXT10g001190 X. tropicalis
NCBI 10.1 XBXL10_1g42289 X. laevis.S
NCBI 10.1 XBXL10_1g39061 X. laevis.L
ENSEMBL 10.0 hoxb3 X. tropicalis
Xenbase 9.1 gene3529 X. tropicalis
ENSEMBL 9.1 hoxb3 X. tropicalis
JGI 8.0 Xetrov14041301m.g X. tropicalis
JGI 7.1 Xetro.J00749 X. tropicalis
JGI 7.2 Xelaev16009239m.g X. laevis.S
JGI 6.0 XeXenL6RMv10014013m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000021967 X. tropicalis
JGI 4.1 e_gw1.334.27.1 X. tropicalis
JGI 4.1 e_gw1.334.6.1 X. tropicalis
JGI 4.1 e_gw1.334.77.1 X. tropicalis
JGI 4.1 gw1.334.27.1 X. tropicalis
JGI 4.1 gw1.334.6.1 X. tropicalis
JGI 4.1 gw1.334.77.1 X. tropicalis
JGI 4.1 LAU_fgenesh1_Sanger_cdna.C_scaffold_334000003 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_334000003 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_334000022 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_334000011 X. tropicalis

mRNAs based on gene models(29)

Source Version Model Species
NCBI 10.0 mRNA005948 X. tropicalis
NCBI 10.1 XBmRNA73683 X. laevis.L
NCBI 10.1 XBmRNA79500 X. laevis.S
ENSEMBL 10.0 ENSXETT00000110200 X. tropicalis
ENSEMBL 10.0 ENSXETT00000108477 X. tropicalis
ENSEMBL 10.0 ENSXETT00000117597 X. tropicalis
ENSEMBL 10.0 ENSXETT00000115490 X. tropicalis
ENSEMBL 10.0 ENSXETT00000120390 X. tropicalis
ENSEMBL 10.0 ENSXETT00000118763 X. tropicalis
ENSEMBL 10.0 ENSXETT00000047547 X. tropicalis
ENSEMBL 10.0 ENSXETT00000118712 X. tropicalis
Xenbase 9.1 rna11587 X. tropicalis
ENSEMBL 9.1 ENSXETT00000047547 X. tropicalis
JGI 8.0 Xetrov14041301m X. tropicalis
JGI 7.1 Xetro.J00749.2 X. tropicalis
JGI 7.1 Xetro.J00749.1 X. tropicalis
JGI 7.2 Xelaev16009239m X. laevis.S
JGI 6.0 XeXenL6RMv10014013m X. laevis.S
JGI 4.1 e_gw1.334.27.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000047547 X. tropicalis
JGI 4.1 e_gw1.334.6.1 X. tropicalis
JGI 4.1 e_gw1.334.77.1 X. tropicalis
JGI 4.1 gw1.334.27.1 X. tropicalis
JGI 4.1 gw1.334.6.1 X. tropicalis
JGI 4.1 gw1.334.77.1 X. tropicalis
JGI 4.1 LAU_fgenesh1_Sanger_cdna.C_scaffold_334000003 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_334000003 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_334000022 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_334000011 X. tropicalis

mRNAs from cDNA libraries (29)

Clone Accession Species Library Anatomy Stage
NM_001015971 X. tropicalis
TNeu134e01 CR848404 X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7607216 BC135406 X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
XM_012971754 X. tropicalis
XM_018097735 X. tropicalis
XM_012971752 X. tropicalis
XM_012971751 X. tropicalis
XM_012971750 X. tropicalis
XM_012971749 X. tropicalis
XM_012971748 X. tropicalis
XM_012971747 X. tropicalis
XM_012971746 X. tropicalis
XM_018238026 X. laevis.S
XM_018238026 X. laevis.S
XM_018234773 X. laevis.L
XM_018234773 X. laevis.L
XM_018234768 X. laevis.L
XM_018234768 X. laevis.L
XM_018234766 X. laevis.L
XM_018234766 X. laevis.L
XM_018234765 X. laevis.L
XM_018234765 X. laevis.L
XM_041578020 X. laevis.S
XM_041578019 X. laevis.S
XM_041578018 X. laevis.S
XM_041578017 X. laevis.S
XM_041578016 X. laevis.S
XM_041578015 X. laevis.S
XM_041578014 X. laevis.S

ESTs (18)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7631738 CX397571 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7607216 CX367600 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TNeu134e01 AL789791 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:5336500 BQ522210 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
L1G3e4 AL643764 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7631738 CX397570 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7607216 CX367599 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TNeu134e01 BX699571 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:5336500 BQ522209 3' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
xl337a18 DC134088 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
p8a3 AU244889 5' X. laevis.S Shibata Xenopus AEM lambda-ZAP II cDNA library endomesoderm NF stage 12.5 to NF stage 13
IMAGE:8317790 DY570900 5' X. laevis.S NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
XL094c23 BJ071372 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL100o19 BJ067523 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL070e15 BJ063151 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL012i13 BJ029460 5' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL094c23 BJ091114 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL100o19 BJ084911 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25