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Summary Expression Phenotypes Gene Literature (12) GO Terms (9) Nucleotides (79) Proteins (47) Interactants (191) Wiki
XB-GENEPAGE-480569

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for irx4 - All

RefSeq mRNAs(3)
Models - Gene (26)
Models - mRNA (26)
mRNAs (10)
ESTs (7)

RefSeq mRNAs (3)

Accession Version name Length Protein Species
NM_001276692 NM_001276692.1 iroquois-class homeodomain protein irx-4 2254 bp NP_001263621 X. tropicalis
NM_001096735 NM_001096735.1 iroquois-class homeodomain protein irx-4-A 2363 bp NP_001090204 X. laevis.L
NM_001161391 NM_001161391.1 iroquois-class homeodomain protein irx-4-B 2012 bp NP_001154863 X. laevis.S

Models - Gene (26)

Source Version Model Species
NCBI 10.0 XBXT10g006772 X. tropicalis
NCBI 10.1 XBXL10_1g27425 X. laevis.L
NCBI 10.1 XBXL10_1g29189 X. laevis.S
ENSEMBL 10.0 irx4 X. tropicalis
JGI 9.1 Xelaev18031334m.g X. laevis.L
JGI 9.1 Xelaev18033316m.g X. laevis.S
Xenbase 9.1 gene33299 X. tropicalis
Xenbase 9.2 gene408 X. laevis.L
Xenbase 9.2 gene42899 X. laevis.S
ENSEMBL 9.1 irx4 X. tropicalis
JGI 7.1 Xetro.F00976 X. tropicalis
JGI 7.2 Xelaev16051379m.g X. laevis.L
JGI 7.2 Xelaev16063377m.g X. laevis.S
JGI 6.0 XeXenL6RMv10005715m.g X. laevis.L
JGI 6.0 XeXenL6RMv10025281m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000008892 X. tropicalis
JGI 4.1 e_gw1.844.11.1 X. tropicalis
JGI 4.1 e_gw1.844.8.1 X. tropicalis
JGI 4.1 e_gw1.844.9.1 X. tropicalis
JGI 4.1 C_scaffold_844000003 X. tropicalis
JGI 4.1 gw1.844.11.1 X. tropicalis
JGI 4.1 gw1.844.8.1 X. tropicalis
JGI 4.1 gw1.844.9.1 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_844000003 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_844000005 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_844000006 X. tropicalis

mRNAs based on gene models(26)

Source Version Model Species
NCBI 10.0 mRNA033529 X. tropicalis
NCBI 10.1 XBmRNA51438 X. laevis.L
NCBI 10.1 XBmRNA54869 X. laevis.S
ENSEMBL 10.0 ENSXETT00000019512 X. tropicalis
JGI 9.1 Xelaev18031334m X. laevis.L
JGI 9.1 Xelaev18033316m X. laevis.S
Xenbase 9.1 rna62852 X. tropicalis
Xenbase 9.2 rna1184 X. laevis.L
Xenbase 9.2 rna86021 X. laevis.S
ENSEMBL 9.1 ENSXETT00000019512 X. tropicalis
JGI 7.1 Xetro.F00976.1 X. tropicalis
JGI 7.2 Xelaev16051379m X. laevis.L
JGI 7.2 Xelaev16063377m X. laevis.S
JGI 6.0 XeXenL6RMv10005715m X. laevis.L
JGI 6.0 XeXenL6RMv10025281m X. laevis.S
JGI 4.1 C_scaffold_844000003 X. tropicalis
ENSEMBL 4.1 ENSXETT00000019512 X. tropicalis
JGI 4.1 e_gw1.844.11.1 X. tropicalis
JGI 4.1 e_gw1.844.8.1 X. tropicalis
JGI 4.1 e_gw1.844.9.1 X. tropicalis
JGI 4.1 gw1.844.11.1 X. tropicalis
JGI 4.1 gw1.844.8.1 X. tropicalis
JGI 4.1 gw1.844.9.1 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_844000003 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_844000005 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_844000006 X. tropicalis

mRNAs from cDNA libraries (10)

Clone Accession Species Library Anatomy Stage
TNeu144j16 CT025292 X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
NM_001276692 X. tropicalis
CR420107 X. tropicalis
AF338157 X. laevis.L
NM_001096735 X. laevis.L
IMAGE:9093666 BC170284 X. laevis.S
NM_001161391 X. laevis.S
XM_018268545 X. laevis.S
XM_018268544 X. laevis.S
XM_018268543 X. laevis.S

ESTs (7)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7624373 CX401520 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTbA067i17 CR420107 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTpA065k09 BX742183 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TNeu144j16 AL789990 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7624373 CX401519 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:6872896 CB197971 5' X. laevis.L NICHD_XGC_Tad2 whole organism NF stage 62
IMAGE:6872896 CB565221 3' X. laevis.L NICHD_XGC_Tad2 whole organism NF stage 62