Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Phenotypes Gene Literature (1) GO Terms (10) Nucleotides (142) Proteins (55) Interactants (12) Wiki
XB-GENEPAGE-479592

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for socs5 - Xenopus tropicalis

RefSeq mRNAs(2)
Models - Gene (26)
Models - mRNA (28)
mRNAs (4)
ESTs (16)

RefSeq mRNAs (2)

Accession Version name Length Protein Species
NM_001016844 NM_001016844.2 suppressor of cytokine signaling 5 2258 bp NP_001016844 X. tropicalis
XM_012963030 XM_012963030.3 suppressor of cytokine signaling 5 isoform X1 3197 bp XP_012818484 X. tropicalis

Models - Gene (26)

Source Version Model Species
NCBI 10.0 XBXT10g019143 X. tropicalis
ENSEMBL 10.0 socs5 X. tropicalis
Xenbase 9.1 gene3971 X. tropicalis
JGI 8.0 Xetrov14024210m.g X. tropicalis
JGI 7.1 Xetro.E01496 X. tropicalis
ENSEMBL 4.1 ENSXETG00000022744 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_25000012 X. tropicalis
JGI 4.1 e_gw1.25.11.1 X. tropicalis
JGI 4.1 e_gw1.25.114.1 X. tropicalis
JGI 4.1 e_gw1.25.206.1 X. tropicalis
JGI 4.1 e_gw1.25.207.1 X. tropicalis
JGI 4.1 e_gw1.25.255.1 X. tropicalis
JGI 4.1 gw1.25.11.1 X. tropicalis
JGI 4.1 gw1.25.114.1 X. tropicalis
JGI 4.1 gw1.25.206.1 X. tropicalis
JGI 4.1 gw1.25.207.1 X. tropicalis
JGI 4.1 gw1.25.255.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_250011 X. tropicalis
JGI 4.1 estExt_Genewise1.C_250113 X. tropicalis
JGI 4.1 estExt_Genewise1.C_250252 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_250012 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_250003 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_25000003 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_25000001 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_25000013 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_25000003 X. tropicalis

mRNAs based on gene models(28)

Source Version Model Species
NCBI 10.0 mRNA094604 X. tropicalis
ENSEMBL 10.0 ENSXETT00000108228 X. tropicalis
ENSEMBL 10.0 ENSXETT00000110255 X. tropicalis
ENSEMBL 10.0 ENSXETT00000120093 X. tropicalis
Xenbase 9.1 rna12974 X. tropicalis
JGI 8.0 Xetrov14024210m X. tropicalis
JGI 7.1 Xetro.E01496.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_25000012 X. tropicalis
ENSEMBL 4.1 ENSXETT00000049206 X. tropicalis
JGI 4.1 e_gw1.25.11.1 X. tropicalis
JGI 4.1 e_gw1.25.114.1 X. tropicalis
JGI 4.1 e_gw1.25.206.1 X. tropicalis
JGI 4.1 e_gw1.25.207.1 X. tropicalis
JGI 4.1 e_gw1.25.255.1 X. tropicalis
JGI 4.1 gw1.25.11.1 X. tropicalis
JGI 4.1 gw1.25.114.1 X. tropicalis
JGI 4.1 gw1.25.206.1 X. tropicalis
JGI 4.1 gw1.25.207.1 X. tropicalis
JGI 4.1 gw1.25.255.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_250011 X. tropicalis
JGI 4.1 estExt_Genewise1.C_250113 X. tropicalis
JGI 4.1 estExt_Genewise1.C_250252 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_250012 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_250003 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_25000003 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_25000001 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_25000013 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_25000003 X. tropicalis

mRNAs from cDNA libraries (4)

Clone Accession Species Library Anatomy Stage
NM_001016844 X. tropicalis
TNeu050n02 CR855450 X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:6985056 BC161341 X. tropicalis NICHD_XGC_Emb8 whole organism NF stage 40 to NF stage 45
XM_012963030 X. tropicalis

ESTs (16)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7789822 CX323277 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7565898 CX483099 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7692105 CX917657 5' X. tropicalis NIH_XGC_tropTe4 testis frog
THdA042g20 CR584461 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
xthr35I10 CN110425 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TTpA036n12 BX728829 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TNeu090f16 AL800795 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu133e19 AL798281 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu050n02 AL661963 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:6985056 CF151937 5' X. tropicalis NICHD_XGC_Emb8 whole organism NF stage 40 to NF stage 45
IMAGE:5381975 BQ527853 5' X. tropicalis NICHD_XGC_Emb8 whole organism NF stage 40 to NF stage 45
IMAGE:7692105 CX917656 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7565898 CX483098 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
THdA042g20 CR584462 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TNeu090f16 BX695268 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:5381975 BQ527852 3' X. tropicalis NICHD_XGC_Emb8 whole organism NF stage 40 to NF stage 45