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Summary Expression Phenotypes Gene Literature (2) GO Terms (5) Nucleotides (97) Proteins (60) Interactants (41) Wiki
XB-GENEPAGE-478534

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for rora - All

RefSeq mRNAs(8)
Models - Gene (21)
Models - mRNA (36)
mRNAs (9)
ESTs (14)

RefSeq mRNAs (8)

Accession Version Protein Name Length Protein Species
NM_001079195 NM_001079195.1 nuclear receptor ROR-alpha 6660 bp NP_001072663 X. tropicalis
XM_012966749 XM_012966749.3 nuclear receptor ROR-alpha isoform X1 2653 bp XP_012822203 X. tropicalis
XM_012966750 XM_012966750.3 nuclear receptor ROR-alpha isoform X2 2538 bp XP_012822204 X. tropicalis
XM_041586690 XM_041586690.1 XP_041442624.1 nuclear receptor ROR-alpha A isoform X1 2756 bp XP_041442624 X. laevis.L
XM_041586691 XM_041586691.1 XP_041442625.1 nuclear receptor ROR-alpha isoform X2 2787 bp XP_041442625 X. laevis.L
XM_018252931 XM_018252931.2 nuclear receptor ROR-alpha isoform X3 2677 bp XP_018108420 X. laevis.L
XM_018255570 XM_018255570.2 nuclear receptor ROR-alpha A isoform X1 4899 bp XP_018111059 X. laevis.S
XM_018255571 XM_018255571.2 nuclear receptor ROR-alpha isoform X2 4907 bp XP_018111060 X. laevis.S

Models - Gene (21)

Source Version Model Species
NCBI 10.0 XBXT10g006752 X. tropicalis
NCBI 10.1 XBXL10_1g13026 X. laevis.L
NCBI 10.1 XBXL10_1g15900 X. laevis.S
ENSEMBL 10.0 rora X. tropicalis
JGI 9.1 Xelaev18018059m.g X. laevis.L
JGI 9.1 Xelaev18020760m.g X. laevis.S
Xenbase 9.1 gene6631 X. tropicalis
Xenbase 9.2 gene14173 X. laevis.L
Xenbase 9.2 gene4880 X. laevis.S
ENSEMBL 9.1 rora X. tropicalis
JGI 7.1 Xetro.G01020 X. tropicalis
JGI 6.0 XeXenL6RMv10019235m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000021123 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_295000010 X. tropicalis
JGI 4.1 e_gw1.295.3.1 X. tropicalis
JGI 4.1 e_gw1.295.89.1 X. tropicalis
JGI 4.1 e_gw1.295.90.1 X. tropicalis
JGI 4.1 gw1.295.3.1 X. tropicalis
JGI 4.1 gw1.295.89.1 X. tropicalis
JGI 4.1 gw1.295.90.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_295000028 X. tropicalis

mRNAs based on gene models(36)

Source Version Model Species
NCBI 10.0 mRNA033425 X. tropicalis
NCBI 10.1 XBmRNA24680 X. laevis.L
NCBI 10.1 XBmRNA29683 X. laevis.S
ENSEMBL 10.0 ENSXETT00000074927 X. tropicalis
ENSEMBL 10.0 ENSXETT00000085269 X. tropicalis
ENSEMBL 10.0 ENSXETT00000103895 X. tropicalis
ENSEMBL 10.0 ENSXETT00000093050 X. tropicalis
ENSEMBL 10.0 ENSXETT00000097890 X. tropicalis
ENSEMBL 10.0 ENSXETT00000075336 X. tropicalis
JGI 9.1 Xelaev18018059m X. laevis.L
JGI 9.1 Xelaev18020760m X. laevis.S
Xenbase 9.1 rna21416 X. tropicalis
Xenbase 9.2 rna41279 X. laevis.L
Xenbase 9.2 rna14252 X. laevis.S
ENSEMBL 9.1 ENSXETT00000104958 X. tropicalis
ENSEMBL 9.1 ENSXETT00000097890 X. tropicalis
ENSEMBL 9.1 ENSXETT00000103895 X. tropicalis
ENSEMBL 9.1 ENSXETT00000093050 X. tropicalis
ENSEMBL 9.1 ENSXETT00000075336 X. tropicalis
ENSEMBL 9.1 ENSXETT00000094750 X. tropicalis
ENSEMBL 9.1 ENSXETT00000074927 X. tropicalis
ENSEMBL 9.1 ENSXETT00000085269 X. tropicalis
ENSEMBL 9.1 ENSXETT00000045670 X. tropicalis
ENSEMBL 9.1 ENSXETT00000086093 X. tropicalis
JGI 7.1 Xetro.G01020.1 X. tropicalis
JGI 6.0 XeXenL6RMv10019235m X. laevis.L
JGI 4.1 fgenesh1_pm.C_scaffold_295000010 X. tropicalis
ENSEMBL 4.1 ENSXETT00000045673 X. tropicalis
ENSEMBL 4.1 ENSXETT00000045670 X. tropicalis
JGI 4.1 e_gw1.295.3.1 X. tropicalis
JGI 4.1 e_gw1.295.89.1 X. tropicalis
JGI 4.1 e_gw1.295.90.1 X. tropicalis
JGI 4.1 gw1.295.3.1 X. tropicalis
JGI 4.1 gw1.295.89.1 X. tropicalis
JGI 4.1 gw1.295.90.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_295000028 X. tropicalis

mRNAs from cDNA libraries (9)

Clone Accession Species Library Anatomy Stage
NM_001079195 X. tropicalis
IMAGE:7641628 BC123953 X. tropicalis NIH_XGC_tropBrn2 brain frog
XM_012966750 X. tropicalis
XM_012966749 X. tropicalis
XM_018255571 X. laevis.S
XM_018255570 X. laevis.S
XM_018252931 X. laevis.L
XM_041586691 X. laevis.L
XM_041586690 X. laevis.L

ESTs (14)

Clone Accession 5'/3' Species Library Anatomy Stage
TTbA062g21 CR450144 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7641853 CX795539 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7641628 CX795641 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7655960 CX826718 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7695858 CX925234 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7707717 CX960550 5' X. tropicalis NIH_XGC_tropTe5 testis frog
TTpA008l01 BX704515 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTbA062g21 CR450145 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7707717 CX960549 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7641853 CX795538 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7641628 CX795640 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7655960 CX826717 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7695858 CX925233 3' X. tropicalis NIH_XGC_tropTe4 testis frog
TTpA008l01 BX704516 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40