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Summary Expression Phenotypes Gene Literature (6) GO Terms (4) Nucleotides (131) Proteins (51) Interactants (6) Wiki
XB-GENEPAGE-1217654

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for bnc1 - All

RefSeq mRNAs(5)
Models - Gene (27)
Models - mRNA (27)
mRNAs (15)
ESTs (17)

RefSeq mRNAs (5)

Accession Version name Length Protein Species
XM_041588275 XM_041588275.1 XP_041444209.1 zinc finger protein basonuclin-1 isoform X1 4170 bp XP_041444209 X. laevis.S
XM_041586801 XM_041586801.1 XP_041442735.1 zinc finger protein basonuclin-1 isoform X2 4867 bp XP_041442735 X. laevis.L
XM_041586802 XM_041586802.1 XP_041442736.1 zinc finger protein basonuclin-1 isoform X2 4832 bp XP_041442736 X. laevis.L
XM_041586803 XM_041586803.1 XP_041442737.1 zinc finger protein basonuclin-1 isoform X2 4764 bp XP_041442737 X. laevis.L
XM_041586804 XM_041586804.1 XP_041442738.1 zinc finger protein basonuclin-1 isoform X3 3746 bp XP_041442738 X. laevis.L

Models - Gene (27)

Source Version Model Species
NCBI 10.0 XBXT10g002074 X. tropicalis
NCBI 10.1 XBXL10_1g13253 X. laevis.L
NCBI 10.1 XBXL10_1g15685 X. laevis.S
ENSEMBL 10.0 bnc1 X. tropicalis
JGI 9.1 Xelaev18018274m.g X. laevis.L
JGI 9.1 Xelaev18020585m.g X. laevis.S
Xenbase 9.1 gene20523 X. tropicalis
Xenbase 9.2 gene35259 X. laevis.L
Xenbase 9.2 gene20437 X. laevis.S
ENSEMBL 9.1 bnc1 X. tropicalis
JGI 7.1 Xetro.C00628 X. tropicalis
JGI 6.0 XeXenL6RMv10001204m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000016084 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_5620004 X. tropicalis
JGI 4.1 e_gw1.562.11.1 X. tropicalis
JGI 4.1 e_gw1.562.14.1 X. tropicalis
JGI 4.1 e_gw1.562.33.1 X. tropicalis
JGI 4.1 gw1.562.14.1 X. tropicalis
JGI 4.1 gw1.562.33.1 X. tropicalis
JGI 4.1 gw1.562.11.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_5620003 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5620011 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5620014 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5620033 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_5620002 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_562000004 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_562000002 X. tropicalis

mRNAs based on gene models(27)

Source Version Model Species
NCBI 10.0 mRNA010433 X. tropicalis
NCBI 10.1 XBmRNA25124 X. laevis.L
NCBI 10.1 XBmRNA29302 X. laevis.S
ENSEMBL 10.0 ENSXETT00000035077 X. tropicalis
JGI 9.1 Xelaev18018274m X. laevis.L
JGI 9.1 Xelaev18020585m X. laevis.S
Xenbase 9.1 rna42383 X. tropicalis
Xenbase 9.2 rna75151 X. laevis.L
Xenbase 9.2 rna59695 X. laevis.S
ENSEMBL 9.1 ENSXETT00000035077 X. tropicalis
JGI 7.1 Xetro.C00628.1 X. tropicalis
JGI 6.0 XeXenL6RMv10001204m X. laevis.L
JGI 4.1 estExt_fgenesh1_pg.C_5620004 X. tropicalis
ENSEMBL 4.1 ENSXETT00000035077 X. tropicalis
JGI 4.1 e_gw1.562.11.1 X. tropicalis
JGI 4.1 e_gw1.562.14.1 X. tropicalis
JGI 4.1 e_gw1.562.33.1 X. tropicalis
JGI 4.1 gw1.562.14.1 X. tropicalis
JGI 4.1 gw1.562.33.1 X. tropicalis
JGI 4.1 gw1.562.11.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_5620003 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5620011 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5620014 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5620033 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_5620002 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_562000004 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_562000002 X. tropicalis

mRNAs from cDNA libraries (15)

Clone Accession Species Library Anatomy Stage
XM_002940098 X. tropicalis
XM_004912619 X. tropicalis
XM_004912617 X. tropicalis
XM_012959517 X. tropicalis
XM_018255384 X. laevis.S
XM_018255381 X. laevis.S
XM_018255380 X. laevis.S
XM_018255379 X. laevis.S
XM_018253139 X. laevis.L
XM_018253138 X. laevis.L
XM_041588275 X. laevis.S
XM_041586804 X. laevis.L
XM_041586803 X. laevis.L
XM_041586802 X. laevis.L
XM_041586801 X. laevis.L

ESTs (17)

Clone Accession 5'/3' Species Library Anatomy Stage
XZT12533 CX320948 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7602620 CX393651 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7688382 CX911392 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7586928 CX312722 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
THdA037h03 CR575859 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA037f13 CR575845 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTbA005f18 CR417558 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TGas129m03 AL972420 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTpA069c22 BX736679 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
XZT12533 CX320947 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7602620 DR893114 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7688382 CX911391 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7586928 CX312721 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
THdA037f13 CR575846 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTbA005f18 CR417559 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTpA031a10 BX730251 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:8528286 EB468231 5' X. laevis.L NICHD_XGC_int_m whole organism NF stage 56 to NF stage 62