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Summary Expression Phenotypes Gene Literature (1) GO Terms (24) Nucleotides (166) Proteins (99) Interactants (40) Wiki
XB-GENEPAGE-1217622

Show:     All X. tropicalis X. laevis

Nucleotide sequences for chd9 - All

RefSeq mRNAs(17)
Models - Gene (33)
Models - mRNA (52)
mRNAs (20)
ESTs (26)

RefSeq mRNAs (17)

Accession Version Protein Name Length Protein Species
NM_001375309 NM_001375309.1 NP_001362238.1 chromodomain-helicase-DNA-binding protein 9 9336 bp NP_001362238 X. tropicalis
XM_031900157 XM_031900157.1 XP_031756017.1 chromodomain-helicase-DNA-binding protein 9 isoform X1 10112 bp XP_031756017 X. tropicalis
XM_031900158 XM_031900158.1 XP_031756018.1 chromodomain-helicase-DNA-binding protein 9 isoform X2 10109 bp XP_031756018 X. tropicalis
XM_031900159 XM_031900159.1 XP_031756019.1 chromodomain-helicase-DNA-binding protein 9 isoform X3 10091 bp XP_031756019 X. tropicalis
XM_031900160 XM_031900160.1 XP_031756020.1 chromodomain-helicase-DNA-binding protein 9 isoform X4 10064 bp XP_031756020 X. tropicalis
XM_031900161 XM_031900161.1 XP_031756021.1 chromodomain-helicase-DNA-binding protein 9 isoform X5 10061 bp XP_031756021 X. tropicalis
XM_031900162 XM_031900162.1 XP_031756022.1 chromodomain-helicase-DNA-binding protein 9 isoform X6 10040 bp XP_031756022 X. tropicalis
XM_031900163 XM_031900163.1 XP_031756023.1 chromodomain-helicase-DNA-binding protein 9 isoform X7 10013 bp XP_031756023 X. tropicalis
XM_018257834 XM_018257834.2 chromodomain-helicase-DNA-binding protein 9 isoform X1 11309 bp XP_018113323 X. laevis.L
XM_018257835 XM_018257835.2 chromodomain-helicase-DNA-binding protein 9 isoform X1 11266 bp XP_018113324 X. laevis.L
XM_018257836 XM_018257836.2 chromodomain-helicase-DNA-binding protein 9 isoform X2 11306 bp XP_018113325 X. laevis.L
XM_018257837 XM_018257837.2 chromodomain-helicase-DNA-binding protein 9 isoform X3 11289 bp XP_018113326 X. laevis.L
XM_018257838 XM_018257838.2 chromodomain-helicase-DNA-binding protein 9 isoform X4 11261 bp XP_018113327 X. laevis.L
XM_041590140 XM_041590140.1 XP_041446074.1 chromodomain-helicase-DNA-binding protein 9 isoform X5 9688 bp XP_041446074 X. laevis.L
XM_041590141 XM_041590141.1 XP_041446075.1 chromodomain-helicase-DNA-binding protein 9 isoform X5 9680 bp XP_041446075 X. laevis.L
XM_041590142 XM_041590142.1 XP_041446076.1 chromodomain-helicase-DNA-binding protein 9 isoform X6 9811 bp XP_041446076 X. laevis.L
XM_041590143 XM_041590143.1 XP_041446077.1 chromodomain-helicase-DNA-binding protein 9 isoform X7 9763 bp XP_041446077 X. laevis.L

Models - Gene (33)

Source Version Model Species
NCBI 10.0 XBXT10g016630 X. tropicalis
NCBI 10.1 XBXL10_1g18573 X. laevis.L
ENSEMBL 10.0 chd9 X. tropicalis
Xenbase 9.1 gene31180 X. tropicalis
ENSEMBL 9.1 chd9 X. tropicalis
JGI 7.1 Xetro.D00487 X. tropicalis
ENSEMBL 4.1 ENSXETG00000000349 X. tropicalis
JGI 4.1 e_gw1.283.5.1 X. tropicalis
JGI 4.1 gw1.283.1.1 X. tropicalis
JGI 4.1 gw1.283.103.1 X. tropicalis
JGI 4.1 gw1.283.148.1 X. tropicalis
JGI 4.1 gw1.283.150.1 X. tropicalis
JGI 4.1 gw1.283.39.1 X. tropicalis
JGI 4.1 gw1.283.40.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2830024 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_2830015 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2830001 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2830039 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2830040 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2830103 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2830148 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2830150 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_2830007 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_283000004 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_283000025 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_283000008 X. tropicalis
JGI 4.1 gw1.283.5.1 X. tropicalis
JGI 4.1 e_gw1.283.1.1 X. tropicalis
JGI 4.1 e_gw1.283.103.1 X. tropicalis
JGI 4.1 e_gw1.283.148.1 X. tropicalis
JGI 4.1 e_gw1.283.150.1 X. tropicalis
JGI 4.1 e_gw1.283.39.1 X. tropicalis
JGI 4.1 e_gw1.283.40.1 X. tropicalis

mRNAs based on gene models(52)

Source Version Model Species
NCBI 10.1 XBmRNA34195 X. laevis.L
ENSEMBL 10.0 ENSXETT00000118137 X. tropicalis
ENSEMBL 10.0 ENSXETT00000078490 X. tropicalis
ENSEMBL 10.0 ENSXETT00000102214 X. tropicalis
ENSEMBL 10.0 ENSXETT00000108935 X. tropicalis
ENSEMBL 10.0 ENSXETT00000000736 X. tropicalis
ENSEMBL 10.0 ENSXETT00000000744 X. tropicalis
NCBI 10.0 mRNA082309 X. tropicalis
ENSEMBL 9.1 ENSXETT00000088714 X. tropicalis
Xenbase 9.1 rna59390 X. tropicalis
ENSEMBL 9.1 ENSXETT00000075143 X. tropicalis
ENSEMBL 9.1 ENSXETT00000078490 X. tropicalis
ENSEMBL 9.1 ENSXETT00000080473 X. tropicalis
ENSEMBL 9.1 ENSXETT00000081968 X. tropicalis
ENSEMBL 9.1 ENSXETT00000099526 X. tropicalis
ENSEMBL 9.1 ENSXETT00000102214 X. tropicalis
ENSEMBL 9.1 ENSXETT00000000744 X. tropicalis
ENSEMBL 9.1 ENSXETT00000000736 X. tropicalis
ENSEMBL 9.1 ENSXETT00000067213 X. tropicalis
JGI 7.1 Xetro.D00487.3 X. tropicalis
JGI 7.1 Xetro.D00487.6 X. tropicalis
JGI 7.1 Xetro.D00487.4 X. tropicalis
JGI 7.1 Xetro.D00487.1 X. tropicalis
JGI 7.1 Xetro.D00487.5 X. tropicalis
JGI 7.1 Xetro.D00487.2 X. tropicalis
JGI 4.1 gw1.283.40.1 X. tropicalis
JGI 4.1 gw1.283.5.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2830150 X. tropicalis
JGI 4.1 e_gw1.283.1.1 X. tropicalis
JGI 4.1 e_gw1.283.148.1 X. tropicalis
JGI 4.1 e_gw1.283.150.1 X. tropicalis
JGI 4.1 e_gw1.283.39.1 X. tropicalis
JGI 4.1 e_gw1.283.40.1 X. tropicalis
JGI 4.1 e_gw1.283.5.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000000736 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2830024 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_2830007 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_2830015 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2830001 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2830039 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2830040 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2830103 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2830148 X. tropicalis
JGI 4.1 e_gw1.283.103.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_283000025 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_283000008 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_283000004 X. tropicalis
JGI 4.1 gw1.283.103.1 X. tropicalis
JGI 4.1 gw1.283.1.1 X. tropicalis
JGI 4.1 gw1.283.148.1 X. tropicalis
JGI 4.1 gw1.283.150.1 X. tropicalis
JGI 4.1 gw1.283.39.1 X. tropicalis

mRNAs from cDNA libraries (20)

Clone Accession Species Library Anatomy Stage
IMAGE:7648654 BC168553 X. tropicalis NIH_XGC_tropBrn2 brain frog
TEgg124c13 CR848497 X. tropicalis
NM_001045586 X. tropicalis
NM_001375309 X. tropicalis
XM_031900157 X. tropicalis
XM_031900158 X. tropicalis
XM_031900159 X. tropicalis
XM_031900160 X. tropicalis
XM_031900161 X. tropicalis
XM_031900162 X. tropicalis
XM_031900163 X. tropicalis
XM_018257834 X. laevis.L
XM_018257835 X. laevis.L
XM_018257836 X. laevis.L
XM_018257837 X. laevis.L
XM_018257838 X. laevis.L
XM_041590140 X. laevis.L
XM_041590141 X. laevis.L
XM_041590142 X. laevis.L
XM_041590143 X. laevis.L

ESTs (26)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7643471 CX798865 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:8916843 EL829699 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:7644567 CX800868 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:8952431 EG655574 5' X. tropicalis NICHD_XGC_tropInt_62 intestine frog
IMAGE:7642133 CX796185 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
CAAN11017 CX926506 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7802482 DR836631 5' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7713003 CX970712 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7643365 CX798133 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7721041 CX996090 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
THdA004i20 CR563962 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:8916843 EL829700 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
THdA004i20 CR563963 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7642133 CX796184 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7643365 CX798132 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7643471 CX798864 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7644567 CX800867 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7649916 CX810239 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
CAAN11017 CX926505 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7713003 CX970711 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7721041 CX996089 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7802482 DR836630 3' X. tropicalis NIH_XGC_tropFat1 fat body frog
xlk81d07ex DC061657 5' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL039c22 BJ037022 5' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
rxlk81d07ex DC028135 3' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL039c22 BJ053531 3' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15