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Summary Expression Phenotypes Gene Literature (0) GO Terms (4) Nucleotides (115) Proteins (50) Interactants (8) Wiki
XB-GENEPAGE-1021705

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for znf653 - All

RefSeq mRNAs(5)
Models - Gene (30)
Models - mRNA (32)
mRNAs (8)
ESTs (32)

RefSeq mRNAs (5)

Accession Version Protein Name Length Protein Species
XM_031899436 XM_031899436.1 XP_031755296.1 zinc finger protein 653 isoform X1 2080 bp XP_031755296 X. tropicalis
XM_031899437 XM_031899437.1 XP_031755297.1 zinc finger protein 653 isoform X2 1852 bp XP_031755297 X. tropicalis
NM_001096418 NM_001096418.1 zinc finger protein 653 L homeolog 2107 bp NP_001089887 X. laevis.L
XM_018242026 XM_018242026.2 zinc finger protein 653 L homeolog isoform X1 2371 bp XP_018097515 X. laevis.L
NM_001127808 NM_001127808.1 uncharacterized protein LOC100158363 2100 bp NP_001121280 X. laevis.S

Models - Gene (30)

Source Version Model Species
NCBI 10.0 XBXT10g004410 X. tropicalis
NCBI 10.1 XBXL10_1g14199 X. laevis.L
NCBI 10.1 XBXL10_1g17164 X. laevis.S
ENSEMBL 10.0 znf653 X. tropicalis
JGI 9.1 Xelaev18004446m.g X. laevis.L
JGI 9.1 Xelaev18000758m.g X. laevis.S
Xenbase 9.1 gene28417 X. tropicalis
Xenbase 9.2 gene12486 X. laevis.L
Xenbase 9.2 gene8987 X. laevis.S
ENSEMBL 9.1 znf653 X. tropicalis
JGI 7.1 Xetro.K00326 X. tropicalis
JGI 7.2 Xelaev16039353m.g X. laevis.L
JGI 6.0 XeXenL6RMv10018331m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000016739 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_4480004 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_4480013 X. tropicalis
JGI 4.1 e_gw1.448.112.1 X. tropicalis
JGI 4.1 e_gw1.448.113.1 X. tropicalis
JGI 4.1 e_gw1.448.124.1 X. tropicalis
JGI 4.1 e_gw1.448.270.1 X. tropicalis
JGI 4.1 gw1.448.124.1 X. tropicalis
JGI 4.1 gw1.448.112.1 X. tropicalis
JGI 4.1 gw1.448.113.1 X. tropicalis
JGI 4.1 gw1.448.270.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4480112 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4480113 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4480270 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_4480014 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_448000014 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_448000004 X. tropicalis

mRNAs based on gene models(32)

Source Version Model Species
NCBI 10.0 mRNA021991 X. tropicalis
NCBI 10.1 XBmRNA26790 X. laevis.L
NCBI 10.1 XBmRNA31816 X. laevis.S
ENSEMBL 10.0 ENSXETT00000036503 X. tropicalis
JGI 9.1 Xelaev18000758m X. laevis.S
JGI 9.1 Xelaev18004446m X. laevis.L
Xenbase 9.1 rna55030 X. tropicalis
Xenbase 9.2 rna26169 X. laevis.S
Xenbase 9.2 rna36305 X. laevis.L
ENSEMBL 9.1 ENSXETT00000036503 X. tropicalis
JGI 7.1 Xetro.K00326.1 X. tropicalis
JGI 7.2 Xelaev16039353m X. laevis.L
JGI 6.0 XeXenL6RMv10018331m X. laevis.L
JGI 4.1 estExt_fgenesh1_pm.C_4480004 X. tropicalis
ENSEMBL 4.1 ENSXETT00000036502 X. tropicalis
ENSEMBL 4.1 ENSXETT00000036503 X. tropicalis
ENSEMBL 4.1 ENSXETT00000056925 X. tropicalis
JGI 4.1 e_gw1.448.112.1 X. tropicalis
JGI 4.1 e_gw1.448.113.1 X. tropicalis
JGI 4.1 e_gw1.448.124.1 X. tropicalis
JGI 4.1 e_gw1.448.270.1 X. tropicalis
JGI 4.1 gw1.448.124.1 X. tropicalis
JGI 4.1 gw1.448.112.1 X. tropicalis
JGI 4.1 gw1.448.113.1 X. tropicalis
JGI 4.1 gw1.448.270.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_4480013 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4480112 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4480113 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4480270 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_4480014 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_448000014 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_448000004 X. tropicalis

mRNAs from cDNA libraries (8)

Clone Accession Species Library Anatomy Stage
XM_031899437 X. tropicalis
XM_031899436 X. tropicalis
IMAGE:7208441 BC108611 X. laevis.L
IMAGE:8321758 BC124898 X. laevis.S NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:5440317 BC097616 X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
NM_001096418 X. laevis.L
NM_001127808 X. laevis.S
XM_018242026 X. laevis.L

ESTs (32)

Clone Accession 5'/3' Species Library Anatomy Stage
st56e06 DC180516 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7514542 CX744709 5' X. tropicalis NIH_XGC_tropGas6 whole organism NF stage 10 to NF stage 13
IMAGE:7794933 CX964108 5' X. tropicalis NIH_XGC_tropTe5 testis frog
st35c11 DC173347 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st54e06 DC180038 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st55e06 DC180286 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:4441075 BG512244 5' X. tropicalis Wellcome CRC pCS107 tropicalis St10-12 whole organism NF stage 10 to NF stage 12
THdA036l24 CR575502 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA036l24 CR575503 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA036l20 CR582315 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7514542 CX744708 3' X. tropicalis NIH_XGC_tropGas6 whole organism NF stage 10 to NF stage 13
IMAGE:7794933 CX964107 3' X. tropicalis NIH_XGC_tropTe5 testis frog
rst35c11 DC143100 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst54e06 DC149754 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
XL047e21 BJ040698 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL012k01 BJ029492 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL086h03 BJ066532 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGp998E167824 BX853915 5' X. laevis.L Harland stage 19-23 whole organism NF stage 19 to NF stage 23
IMAGE:8319405 DY569442 5' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:3200631 AW765573 5' X. laevis.L Harland stage 19-23 whole organism NF stage 19 to NF stage 23
IMAGE:6632150 BU907054 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:6635200 BU909539 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:6877177 CB206011 5' X. laevis.L NICHD_XGC_Tad1 whole organism NF stage 54 to prometamorphosis stage
IMAGE:5440317 CF287828 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
XL012k01 BJ044222 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL047e21 BJ055074 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL086h03 BJ083861 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL401j10ex BP713125 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGE:3200631 AW766347 3' X. laevis.L Harland stage 19-23 whole organism NF stage 19 to NF stage 23
IMAGE:6877177 CB755866 3' X. laevis.L NICHD_XGC_Tad1 whole organism NF stage 54 to prometamorphosis stage
IMAGE:6877177 CB756401 3' X. laevis.L NICHD_XGC_Tad1 whole organism NF stage 54 to prometamorphosis stage
IMAGE:5440317 CF287829 3' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32