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Summary Expression Phenotypes Gene Literature (3) GO Terms (39) Nucleotides (171) Proteins (75) Interactants (99) Wiki
XB-GENEPAGE-1018490

Show:     All X. tropicalis X. laevis

Nucleotide sequences for ush1c - All

RefSeq mRNAs(18)
Models - Gene (35)
Models - mRNA (38)
mRNAs (22)
ESTs (45)

RefSeq mRNAs (18)

Accession Version Protein Name Length Protein Species
NM_001103052 NM_001103052.2 harmonin 1921 bp NP_001096522 X. tropicalis
XM_031899752 XM_031899752.1 XP_031755612.1 harmonin isoform X1 2880 bp XP_031755612 X. tropicalis
XM_031899753 XM_031899753.1 XP_031755613.1 harmonin isoform X2 2871 bp XP_031755613 X. tropicalis
XM_031899754 XM_031899754.1 XP_031755614.1 harmonin isoform X3 2826 bp XP_031755614 X. tropicalis
XM_031899755 XM_031899755.1 XP_031755615.1 harmonin isoform X4 2817 bp XP_031755615 X. tropicalis
XM_031899756 XM_031899756.1 XP_031755616.1 harmonin isoform X5 2808 bp XP_031755616 X. tropicalis
XM_031899757 XM_031899757.1 XP_031755617.1 harmonin isoform X6 2963 bp XP_031755617 X. tropicalis
XM_031899758 XM_031899758.1 XP_031755618.1 harmonin isoform X7 2673 bp XP_031755618 X. tropicalis
XM_031899759 XM_031899759.1 XP_031755619.1 harmonin isoform X8 2900 bp XP_031755619 X. tropicalis
XM_031899760 XM_031899760.1 XP_031755620.1 harmonin isoform X9 1896 bp XP_031755620 X. tropicalis
NM_001096425 NM_001096425.1 USH1 protein network component harmonin S homeolog 1981 bp NP_001089894 X. laevis.S
XM_018259768 XM_018259768.2 USH1 protein network component harmonin S homeolog isoform X4 2152 bp XP_018115257 X. laevis.S
XM_041591453 XM_041591453.1 XP_041447387.1 USH1 protein network component harmonin S homeolog isoform X1 2928 bp XP_041447387 X. laevis.S
XM_041591454 XM_041591454.1 XP_041447388.1 USH1 protein network component harmonin S homeolog isoform X2 2788 bp XP_041447388 X. laevis.S
XM_041591455 XM_041591455.1 XP_041447389.1 USH1 protein network component harmonin S homeolog isoform X3 2168 bp XP_041447389 X. laevis.S
XM_041591456 XM_041591456.1 XP_041447390.1 USH1 protein network component harmonin S homeolog isoform X5 3182 bp XP_041447390 X. laevis.S
XM_041589630 XM_041589630.1 XP_041445564.1 harmonin isoform X1 1952 bp XP_041445564 X. laevis.L
XM_041589631 XM_041589631.1 XP_041445565.1 harmonin isoform X2 2932 bp XP_041445565 X. laevis.L

Models - Gene (35)

Source Version Model Species
NCBI 10.1 XBXL10_1g21089 X. laevis.S
NCBI 10.1 XBXL10_1g17583 X. laevis.L
NCBI 10.0 XBXT10g013747 X. tropicalis
ENSEMBL 10.0 ush1c X. tropicalis
Xenbase 9.2 gene48525 X. laevis.S
Xenbase 9.2 gene1334 X. laevis.L
JGI 9.1 Xelaev18021660m.g X. laevis.L
Xenbase 9.1 gene17532 X. tropicalis
JGI 7.1 Xetro.K03310 X. tropicalis
JGI 6.0 XeXenL6RMv10029224m.g X. laevis.S
JGI 4.1 gw1.1367.6.1 X. tropicalis
JGI 4.1 gw1.1367.8.1 X. tropicalis
JGI 4.1 e_gw1.1367.11.1 X. tropicalis
JGI 4.1 e_gw1.1367.12.1 X. tropicalis
JGI 4.1 e_gw1.1367.13.1 X. tropicalis
JGI 4.1 e_gw1.1367.18.1 X. tropicalis
JGI 4.1 e_gw1.1367.27.1 X. tropicalis
JGI 4.1 e_gw1.1367.26.1 X. tropicalis
JGI 4.1 e_gw1.1367.35.1 X. tropicalis
JGI 4.1 e_gw1.1367.38.1 X. tropicalis
JGI 4.1 e_gw1.1367.40.1 X. tropicalis
JGI 4.1 e_gw1.1367.6.1 X. tropicalis
JGI 4.1 e_gw1.1367.8.1 X. tropicalis
JGI 4.1 gw1.1367.38.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_1367000001 X. tropicalis
JGI 4.1 e_gw1.1367.23.1 X. tropicalis
JGI 4.1 gw1.1367.11.1 X. tropicalis
JGI 4.1 gw1.1367.12.1 X. tropicalis
JGI 4.1 gw1.1367.13.1 X. tropicalis
JGI 4.1 gw1.1367.18.1 X. tropicalis
JGI 4.1 gw1.1367.23.1 X. tropicalis
JGI 4.1 gw1.1367.26.1 X. tropicalis
JGI 4.1 gw1.1367.27.1 X. tropicalis
JGI 4.1 gw1.1367.35.1 X. tropicalis
JGI 4.1 gw1.1367.40.1 X. tropicalis

mRNAs based on gene models(38)

Source Version Model Species
NCBI 10.1 XBmRNA32383 X. laevis.L
NCBI 10.1 XBmRNA39039 X. laevis.S
ENSEMBL 10.0 ENSXETT00000123066 X. tropicalis
ENSEMBL 10.0 ENSXETT00000108963 X. tropicalis
NCBI 10.0 mRNA067985 X. tropicalis
ENSEMBL 10.0 ENSXETT00000120780 X. tropicalis
ENSEMBL 10.0 ENSXETT00000114776 X. tropicalis
Xenbase 9.2 rna94127 X. laevis.S
Xenbase 9.2 rna3893 X. laevis.L
JGI 9.1 Xelaev18021660m X. laevis.L
Xenbase 9.1 rna37732 X. tropicalis
JGI 7.1 Xetro.K03310.1 X. tropicalis
JGI 6.0 XeXenL6RMv10029224m X. laevis.S
JGI 4.1 gw1.1367.11.1 X. tropicalis
JGI 4.1 gw1.1367.12.1 X. tropicalis
JGI 4.1 e_gw1.1367.11.1 X. tropicalis
JGI 4.1 gw1.1367.18.1 X. tropicalis
JGI 4.1 gw1.1367.23.1 X. tropicalis
JGI 4.1 gw1.1367.26.1 X. tropicalis
JGI 4.1 gw1.1367.27.1 X. tropicalis
JGI 4.1 gw1.1367.35.1 X. tropicalis
JGI 4.1 gw1.1367.38.1 X. tropicalis
JGI 4.1 gw1.1367.40.1 X. tropicalis
JGI 4.1 gw1.1367.6.1 X. tropicalis
JGI 4.1 gw1.1367.8.1 X. tropicalis
JGI 4.1 gw1.1367.13.1 X. tropicalis
JGI 4.1 e_gw1.1367.12.1 X. tropicalis
JGI 4.1 e_gw1.1367.13.1 X. tropicalis
JGI 4.1 e_gw1.1367.18.1 X. tropicalis
JGI 4.1 e_gw1.1367.23.1 X. tropicalis
JGI 4.1 e_gw1.1367.26.1 X. tropicalis
JGI 4.1 e_gw1.1367.27.1 X. tropicalis
JGI 4.1 e_gw1.1367.35.1 X. tropicalis
JGI 4.1 e_gw1.1367.38.1 X. tropicalis
JGI 4.1 e_gw1.1367.40.1 X. tropicalis
JGI 4.1 e_gw1.1367.6.1 X. tropicalis
JGI 4.1 e_gw1.1367.8.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_1367000001 X. tropicalis

mRNAs from cDNA libraries (22)

Clone Accession Species Library Anatomy Stage
CX402992 X. tropicalis
DR869568 X. tropicalis
EL663141 X. tropicalis
NM_001103052 X. tropicalis
XM_031899752 X. tropicalis
XM_031899753 X. tropicalis
XM_031899754 X. tropicalis
XM_031899755 X. tropicalis
XM_031899756 X. tropicalis
XM_031899757 X. tropicalis
XM_031899758 X. tropicalis
XM_031899759 X. tropicalis
XM_031899760 X. tropicalis
IMAGE:7764448 BC108635 X. laevis.S
NM_001096425 X. laevis.S
XM_018259768 X. laevis.S
XM_041591453 X. laevis.S
XM_041591454 X. laevis.S
XM_041591455 X. laevis.S
XM_041591456 X. laevis.S
XM_041589630 X. laevis.L
XM_041589631 X. laevis.L

ESTs (45)

Clone Accession 5'/3' Species Library Anatomy Stage
TGas032c01 AL648306 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7667582 CX854360 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:8960295 EL659065 5' X. tropicalis NICHD_XGC_tropInt_63 intestine unspecified stage
IMAGE:7714329 CX973057 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7532150 CX432969 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7719907 CX983549 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7741929 DN033138 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:8949353 EG651484 5' X. tropicalis NICHD_XGC_tropInt_60 intestine frog
IMAGE:8944931 EG654969 5' X. tropicalis NICHD_XGC_tropInt_54 intestine frog
IMAGE:8952803 EG656172 5' X. tropicalis NICHD_XGC_tropInt_62 intestine frog
IMAGE:8956740 EL653826 5' X. tropicalis NICHD_XGC_tropInt_62 intestine frog
IMAGE:8954399 EL662084 5' X. tropicalis NICHD_XGC_tropInt_62 intestine frog
IMAGE:9014503 EL860934 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
THdA015b22 CR563178 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:8966169 EL660953 5' X. tropicalis NICHD_XGC_tropInt_66 intestine unspecified stage
IMAGE:8964824 EL663141 5' X. tropicalis NICHD_XGC_tropInt_66 intestine unspecified stage
XZT444 CX359091 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7624984 CX402992 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:8960903 EL655807 5' X. tropicalis NICHD_XGC_tropInt_63 intestine unspecified stage
IMAGE:7621019 DR898370 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7795325 CX780155 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
st63g07 DC182274 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
TNeu004i02 AL640116 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7658090 CX837175 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:8961086 EL654210 5' X. tropicalis NICHD_XGC_tropInt_63 intestine unspecified stage
IMAGE:7666663 CX852683 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:9014503 EL860935 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
rst63g07 DC152016 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7532150 CX432968 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
THdA015b22 CR563179 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
XZT444 CX359090 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7621019 DR898369 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7795325 CX780720 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7658090 CX837174 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7666663 CX852682 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7667582 CX854359 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7714329 CX973056 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7719907 CX983548 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:8824913 EG571806 5' X. laevis.S NICHD_XGC_int_m whole organism NF stage 56 to NF stage 62
IMAGE:8320254 DY575854 5' X. laevis.S NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
XL095l10 BJ071856 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:3200745 AW765659 5' X. laevis.S Harland stage 19-23 whole organism NF stage 19 to NF stage 23
IMAGE:8528323 EB465556 5' X. laevis.S NICHD_XGC_int_m whole organism NF stage 56 to NF stage 62
IMAGE:8530556 EB477112 5' X. laevis.S NICHD_XGC_int_m whole organism NF stage 56 to NF stage 62
XL095l10 BJ088955 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25