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Summary Expression Phenotypes Gene Literature (0) GO Terms (1) Nucleotides (147) Proteins (55) Interactants (4) Wiki
XB-GENEPAGE-1016435

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for ttc39b - Xenopus laevis

RefSeq mRNAs(4)
Models - Gene (8)
Models - mRNA (8)
mRNAs (5)
ESTs (18)

RefSeq mRNAs (4)

Accession Version name Length Protein Species
NM_001094701 NM_001094701.1 tetratricopeptide repeat protein 39B 2188 bp NP_001088170 X. laevis.L
XM_041580110 XM_041580110.1 XP_041436044.1 tetratricopeptide repeat protein 39B-like isoform X1 3398 bp XP_041436044 X. laevis.S
XM_041580111 XM_041580111.1 XP_041436045.1 tetratricopeptide repeat protein 39B-like isoform X2 2955 bp XP_041436045 X. laevis.S
XM_041581856 XM_041581856.1 XP_041437790.1 tetratricopeptide repeat protein 39B isoform X1 2630 bp XP_041437790 X. laevis.L

Models - Gene (8)

Source Version Model Species
NCBI 10.1 XBXL10_1g2025 X. laevis.L
NCBI 10.1 XBXL10_1g4787 X. laevis.S
JGI 9.1 Xelaev18006797m.g X. laevis.L
JGI 9.1 Xelaev18010054m.g X. laevis.S
Xenbase 9.2 gene5103 X. laevis.L
Xenbase 9.2 gene49600 X. laevis.S
JGI 7.2 Xelaev16055563m.g X. laevis.L
JGI 6.0 XeXenL6RMv10023690m.g X. laevis.L

mRNAs based on gene models(8)

Source Version Model Species
NCBI 10.1 XBmRNA3624 X. laevis.L
NCBI 10.1 XBmRNA8914 X. laevis.S
JGI 9.1 Xelaev18006797m X. laevis.L
JGI 9.1 Xelaev18010054m X. laevis.S
Xenbase 9.2 rna14907 X. laevis.L
Xenbase 9.2 rna95653 X. laevis.S
JGI 7.2 Xelaev16055563m X. laevis.L
JGI 6.0 XeXenL6RMv10023690m X. laevis.L

mRNAs from cDNA libraries (5)

Clone Accession Species Library Anatomy Stage
IMAGE:6866518 BC084078 X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
NM_001094701 X. laevis.L
XM_041581856 X. laevis.L
XM_041580111 X. laevis.S
XM_041580110 X. laevis.S

ESTs (18)

Clone Accession 5'/3' Species Library Anatomy Stage
xl296c06 DC121965 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
IMAGE:8820779 EG584023 5' X. laevis.L NICHD_XGC_int_m whole organism NF stage 56 to NF stage 62
IMAGE:8823648 EG580797 5' X. laevis.L NICHD_XGC_int_m whole organism NF stage 56 to NF stage 62
IMAGE:8536964 EB483911 5' X. laevis.L NICHD_XGC_olfb brain unspecified stage
IMAGE:8529411 EB470138 5' X. laevis.L NICHD_XGC_int_m whole organism NF stage 56 to NF stage 62
IMAGE:8536633 EB469944 5' X. laevis.L NICHD_XGC_olfb brain unspecified stage
IMAGE:8529436 EB463255 5' X. laevis.L NICHD_XGC_int_m whole organism NF stage 56 to NF stage 62
IMAGE:8531135 EB462954 5' X. laevis.L NICHD_XGC_int_m whole organism NF stage 56 to NF stage 62
W013 CK816002 5' X. laevis.L Cornea-lens transdifferentiation library cornea NF stage 50 to NF stage 52
XL016h17 BJ032374 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:6866518 CA988584 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:5157287 CA793503 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:4678855 BI349845 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
PBX0033F02 AW635432 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
rxl296c06 DC087145 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
IMAGE:8820779 EG582145 3' X. laevis.L NICHD_XGC_int_m whole organism NF stage 56 to NF stage 62
IMAGE:8823648 EG576406 3' X. laevis.L NICHD_XGC_int_m whole organism NF stage 56 to NF stage 62
XL016h17 BJ047407 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15