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Summary Expression Phenotypes Gene Literature (0) GO Terms (1) Nucleotides (147) Proteins (55) Interactants (4) Wiki
XB-GENEPAGE-1016435

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for ttc39b - Xenopus tropicalis

RefSeq mRNAs(1)
Models - Gene (18)
Models - mRNA (27)
mRNAs (2)
ESTs (24)

RefSeq mRNAs (1)

Accession Version name Length Protein Species
NM_001016802 NM_001016802.2 tetratricopeptide repeat protein 39B 2234 bp NP_001016802 X. tropicalis

Models - Gene (18)

Source Version Model Species
NCBI 10.0 XBXT10g013682 X. tropicalis
ENSEMBL 10.0 ttc39b X. tropicalis
Xenbase 9.1 gene4370 X. tropicalis
ENSEMBL 9.1 ttc39b X. tropicalis
JGI 8.0 Xetrov14002803m.g X. tropicalis
JGI 7.1 Xetro.A01788 X. tropicalis
ENSEMBL 4.1 ENSXETG00000003301 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_443000001 X. tropicalis
JGI 4.1 e_gw1.443.27.1 X. tropicalis
JGI 4.1 e_gw1.443.35.1 X. tropicalis
JGI 4.1 e_gw1.443.36.1 X. tropicalis
JGI 4.1 gw1.443.27.1 X. tropicalis
JGI 4.1 gw1.443.35.1 X. tropicalis
JGI 4.1 gw1.443.36.1 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_443000002 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_443000003 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_443000004 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_443000002 X. tropicalis

mRNAs based on gene models(27)

Source Version Model Species
NCBI 10.0 mRNA067677 X. tropicalis
ENSEMBL 10.0 ENSXETT00000104893 X. tropicalis
ENSEMBL 10.0 ENSXETT00000007165 X. tropicalis
ENSEMBL 10.0 ENSXETT00000066732 X. tropicalis
Xenbase 9.1 rna14229 X. tropicalis
ENSEMBL 9.1 ENSXETT00000007165 X. tropicalis
ENSEMBL 9.1 ENSXETT00000066732 X. tropicalis
ENSEMBL 9.1 ENSXETT00000104893 X. tropicalis
ENSEMBL 9.1 ENSXETT00000104792 X. tropicalis
ENSEMBL 9.1 ENSXETT00000102987 X. tropicalis
ENSEMBL 9.1 ENSXETT00000080402 X. tropicalis
ENSEMBL 9.1 ENSXETT00000077346 X. tropicalis
JGI 8.0 Xetrov14002803m X. tropicalis
JGI 7.1 Xetro.A01788.2 X. tropicalis
JGI 7.1 Xetro.A01788.1 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_443000001 X. tropicalis
ENSEMBL 4.1 ENSXETT00000007165 X. tropicalis
JGI 4.1 e_gw1.443.27.1 X. tropicalis
JGI 4.1 e_gw1.443.35.1 X. tropicalis
JGI 4.1 e_gw1.443.36.1 X. tropicalis
JGI 4.1 gw1.443.27.1 X. tropicalis
JGI 4.1 gw1.443.35.1 X. tropicalis
JGI 4.1 gw1.443.36.1 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_443000002 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_443000003 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_443000004 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_443000002 X. tropicalis

mRNAs from cDNA libraries (2)

Clone Accession Species Library Anatomy Stage
NM_001016802 X. tropicalis
TEgg088o02 CR855604 X. tropicalis

ESTs (24)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8884023 EL839748 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8859246 EL823477 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8928604 EL677090 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:7788835 CX334057 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7634870 CX338372 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7570436 CX454861 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7719701 CX982765 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7668126 CX855474 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7661496 CX843532 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7642312 CX797120 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7584914 CX416023 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7094281 CK662732 5' X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
TTpA007i07 BX708465 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:8859246 EL823478 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8928604 EL677089 3' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:7570436 CX454860 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7668126 CX855473 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7634870 DR902000 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7719701 CX982764 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7661496 CX843531 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7642312 CX797119 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7584914 CX416022 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7788835 CX334056 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTpA007i07 BX708466 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40