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Summary Expression Phenotypes Gene Literature (0) GO Terms (2) Nucleotides (141) Proteins (71) Interactants (6) Wiki
XB-GENEPAGE-1015759

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for rasgef1b - Xenopus tropicalis

RefSeq mRNAs(1)
Models - Gene (20)
Models - mRNA (34)
mRNAs (9)
ESTs (17)

RefSeq mRNAs (1)

Accession Version name Length Protein Species
NM_001016913 NM_001016913.2 ras-GEF domain-containing family member 1B 2560 bp NP_001016913 X. tropicalis

Models - Gene (20)

Source Version Model Species
NCBI 10.0 XBXT10g014908 X. tropicalis
ENSEMBL 10.0 rasgef1b X. tropicalis
Xenbase 9.1 gene8383 X. tropicalis
ENSEMBL 9.1 rasgef1b X. tropicalis
JGI 7.1 Xetro.A02550 X. tropicalis
ENSEMBL 4.1 ENSXETG00000012564 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_214000007 X. tropicalis
JGI 4.1 e_gw1.214.19.1 X. tropicalis
JGI 4.1 e_gw1.214.66.1 X. tropicalis
JGI 4.1 e_gw1.214.97.1 X. tropicalis
JGI 4.1 gw1.214.19.1 X. tropicalis
JGI 4.1 gw1.214.66.1 X. tropicalis
JGI 4.1 gw1.214.97.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_2140021 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2140019 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2140066 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2140097 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2140048 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_214000006 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_214000049 X. tropicalis

mRNAs based on gene models(34)

Source Version Model Species
NCBI 10.0 mRNA073748 X. tropicalis
ENSEMBL 10.0 ENSXETT00000027482 X. tropicalis
ENSEMBL 10.0 ENSXETT00000081267 X. tropicalis
ENSEMBL 10.0 ENSXETT00000095685 X. tropicalis
ENSEMBL 10.0 ENSXETT00000087874 X. tropicalis
ENSEMBL 10.0 ENSXETT00000086108 X. tropicalis
ENSEMBL 10.0 ENSXETT00000069534 X. tropicalis
Xenbase 9.1 rna27113 X. tropicalis
ENSEMBL 9.1 ENSXETT00000087874 X. tropicalis
ENSEMBL 9.1 ENSXETT00000081267 X. tropicalis
ENSEMBL 9.1 ENSXETT00000027482 X. tropicalis
ENSEMBL 9.1 ENSXETT00000086108 X. tropicalis
ENSEMBL 9.1 ENSXETT00000100014 X. tropicalis
ENSEMBL 9.1 ENSXETT00000095685 X. tropicalis
ENSEMBL 9.1 ENSXETT00000069534 X. tropicalis
ENSEMBL 9.1 ENSXETT00000102095 X. tropicalis
JGI 7.1 Xetro.A02550.3 X. tropicalis
JGI 7.1 Xetro.A02550.2 X. tropicalis
JGI 7.1 Xetro.A02550.1 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_214000007 X. tropicalis
ENSEMBL 4.1 ENSXETT00000027482 X. tropicalis
JGI 4.1 e_gw1.214.19.1 X. tropicalis
JGI 4.1 e_gw1.214.66.1 X. tropicalis
JGI 4.1 e_gw1.214.97.1 X. tropicalis
JGI 4.1 gw1.214.19.1 X. tropicalis
JGI 4.1 gw1.214.66.1 X. tropicalis
JGI 4.1 gw1.214.97.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_2140021 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2140019 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2140066 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2140097 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2140048 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_214000006 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_214000049 X. tropicalis

mRNAs from cDNA libraries (9)

Clone Accession Species Library Anatomy Stage
NM_001016913 X. tropicalis
TNeu048b05 CR848333 X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7546647 BC160385 X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
XM_018093589 X. tropicalis
XM_012963029 X. tropicalis
XM_031900231 X. tropicalis
XM_031900226 X. tropicalis
XM_031900213 X. tropicalis
XM_031900210 X. tropicalis

ESTs (17)

Clone Accession 5'/3' Species Library Anatomy Stage
XZT13131 CX321294 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7546647 CX500056 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7849491 DT535048 5' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7801946 DR835537 5' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7657059 CX828470 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7517059 CX748083 5' X. tropicalis NIH_XGC_tropNeu5 whole organism NF stage 14 to NF stage 18
TTbA029j06 CR413540 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TGas050k21 AL649697 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTpA032e09 BX744274 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA022e10 BX703135 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TNeu048b05 AL658753 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
XZT13131 CX321293 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7849491 DT535047 3' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7517059 CX748082 3' X. tropicalis NIH_XGC_tropNeu5 whole organism NF stage 14 to NF stage 18
IMAGE:7546647 CX500055 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
THdA028f02 CR567896 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTbA029j06 CR413541 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30