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Summary Expression Phenotypes Gene Literature (1) GO Terms (6) Nucleotides (92) Proteins (35) Interactants (64) Wiki
XB-GENEPAGE-1015180

Show:     All X. tropicalis X. laevis

Nucleotide sequences for sdr39u1 - All

RefSeq mRNAs(3)
Models - Gene (25)
Models - mRNA (25)
mRNAs (8)
ESTs (18)

RefSeq mRNAs (3)

Accession Version Protein Name Length Protein Species
NM_001016261 NM_001016261.2 epimerase family protein SDR39U1 1497 bp NP_001016261 X. tropicalis
XM_018243957 XP_018099446.1 epimerase family protein SDR39U1 isoform X1 1148 bp XP_018099446 X. laevis.S
XM_018243958 XP_018099447.1 epimerase family protein SDR39U1 isoform X2 1476 bp XP_018099447 X. laevis.S

Models - Gene (25)

Source Version Model Species
NCBI 10.0 XBXT10g002262 X. tropicalis
JGI 7.2 Xelaev16065817m.g X. laevis.L
NCBI 10.1 XBXL10_1g5050 X. laevis.S
ENSEMBL 10.0 sdr39u1 X. tropicalis
Xenbase 9.1 gene8266 X. tropicalis
ENSEMBL 9.1 sdr39u1 X. tropicalis
JGI 8.0 Xetrov14002189m.g X. tropicalis
JGI 7.1 Xetro.A01436 X. tropicalis
JGI 6.0 XeXenL6RMv10013985m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000016929 X. tropicalis
JGI 4.1 e_gw1.91.171.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_910029 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_910131 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_91000030 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_91000132 X. tropicalis
JGI 4.1 estExt_Genewise1.C_910348 X. tropicalis
JGI 4.1 e_gw1.91.343.1 X. tropicalis
JGI 4.1 e_gw1.91.348.1 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_91000015 X. tropicalis
JGI 4.1 gw1.91.171.1 X. tropicalis
JGI 4.1 gw1.91.343.1 X. tropicalis
JGI 4.1 gw1.91.348.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_910097 X. tropicalis
JGI 4.1 estExt_Genewise1.C_910171 X. tropicalis
JGI 4.1 estExt_Genewise1.C_910343 X. tropicalis

mRNAs based on gene models(25)

Source Version Model Species
NCBI 10.1 XBmRNA9408 X. laevis.S
NCBI 10.0 mRNA011465 X. tropicalis
ENSEMBL 10.0 ENSXETT00000036892 X. tropicalis
Xenbase 9.1 rna26715 X. tropicalis
ENSEMBL 9.1 ENSXETT00000036892 X. tropicalis
JGI 8.0 Xetrov14002189m X. tropicalis
JGI 7.2 Xelaev16065817m X. laevis.L
JGI 7.1 Xetro.A01436.1 X. tropicalis
JGI 6.0 XeXenL6RMv10013985m X. laevis.L
JGI 4.1 estExt_Genewise1.C_910348 X. tropicalis
JGI 4.1 e_gw1.91.171.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_91000132 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_91000015 X. tropicalis
JGI 4.1 gw1.91.171.1 X. tropicalis
JGI 4.1 gw1.91.343.1 X. tropicalis
JGI 4.1 gw1.91.348.1 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_91000030 X. tropicalis
JGI 4.1 e_gw1.91.343.1 X. tropicalis
JGI 4.1 e_gw1.91.348.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000036892 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_910029 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_910131 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_910097 X. tropicalis
JGI 4.1 estExt_Genewise1.C_910171 X. tropicalis
JGI 4.1 estExt_Genewise1.C_910343 X. tropicalis

mRNAs from cDNA libraries (8)

Clone Accession Species Library Anatomy Stage
IMAGE:7829774 BC157797 X. tropicalis
IMAGE:9040002 BC170744 X. tropicalis
IMAGE:9040004 BC170746 X. tropicalis
TGas134g15 CR761700 X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
NM_001016261 X. tropicalis
IMAGE:7764335 BC106530 X. laevis.L
XM_018243957 X. laevis.S
XM_018243958 X. laevis.S

ESTs (18)

Clone Accession 5'/3' Species Library Anatomy Stage
TGas134g15 AL966326 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:6986099 CF151676 5' X. tropicalis NICHD_XGC_Emb8 whole organism NF stage 40 to NF stage 45
IMAGE:7707842 CX960759 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7579862 CX419053 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:8886247 EL843400 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
XZT13162 CX321338 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTpA004l04 BX711174 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7579862 CX419052 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:8886247 EL843401 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:7707842 CX960758 3' X. tropicalis NIH_XGC_tropTe5 testis frog
XL428c14ex BP677880 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
PBX0071H10 AW638591 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:5155506 CA792642 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:6865604 CA988440 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
xl236l15 DC104699 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
PBX0012B07 AW633788 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
XL428c14ex BP714952 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGE:5162368 BQ397991 3' X. laevis.L Soares NXEG egg unfertilized egg stage