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Summary Expression Phenotypes Gene Literature (2) GO Terms (14) Nucleotides (125) Proteins (58) Interactants (43) Wiki
XB-GENEPAGE-1015067

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for aptx - All

RefSeq mRNAs(10)
Models - Gene (23)
Models - mRNA (28)
mRNAs (18)
ESTs (28)

RefSeq mRNAs (10)

Accession Version name Length Protein Species
NM_205825 NM_205825.2 aprataxin 1561 bp NP_991394 X. tropicalis
XM_041573501 XM_041573501.1 XP_041429435.1 aprataxin isoform X1 2514 bp XP_041429435 X. laevis.L
XM_041573542 XM_041573542.1 XP_041429476.1 aprataxin isoform X1 2586 bp XP_041429476 X. laevis.L
XM_041573587 XM_041573587.1 XP_041429521.1 aprataxin isoform X1 2602 bp XP_041429521 X. laevis.L
XM_041573643 XM_041573643.1 XP_041429577.1 aprataxin isoform X1 2632 bp XP_041429577 X. laevis.L
XM_041573701 XM_041573701.1 XP_041429635.1 aprataxin isoform X1 2565 bp XP_041429635 X. laevis.L
XM_041573747 XM_041573747.1 XP_041429681.1 aprataxin isoform X2 2531 bp XP_041429681 X. laevis.L
XM_041573810 XM_041573810.1 XP_041429744.1 aprataxin isoform X2 2310 bp XP_041429744 X. laevis.L
XM_041573856 XM_041573856.1 XP_041429790.1 aprataxin isoform X3 2291 bp XP_041429790 X. laevis.L
NM_001089220 NM_001089220.1 aprataxin 1588 bp NP_001082689 X. laevis.L

Models - Gene (23)

Source Version Model Species
NCBI 10.0 XBXT10g003239 X. tropicalis
NCBI 10.1 XBXL10_1g1464 X. laevis.L
ENSEMBL 10.0 aptx X. tropicalis
JGI 9.1 Xelaev18006123m.g X. laevis.L
Xenbase 9.1 gene21461 X. tropicalis
Xenbase 9.2 gene18206 X. laevis.L
ENSEMBL 9.1 aptx X. tropicalis
JGI 8.0 Xetrov14004014m.g X. tropicalis
JGI 7.1 Xetro.A02369 X. tropicalis
JGI 7.2 Xelaev16064383m.g X. laevis.L
JGI 6.0 XeXenL6RMv10008171m.g X. laevis.L
JGI 6.0 XeXenL6RMv10036771m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000024143 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_79000004 X. tropicalis
JGI 4.1 e_gw1.79.156.1 X. tropicalis
JGI 4.1 e_gw1.79.157.1 X. tropicalis
JGI 4.1 e_gw1.79.186.1 X. tropicalis
JGI 4.1 gw1.79.156.1 X. tropicalis
JGI 4.1 gw1.79.157.1 X. tropicalis
JGI 4.1 gw1.79.186.1 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_79000007 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_79000065 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_79000066 X. tropicalis

mRNAs based on gene models(28)

Source Version Model Species
NCBI 10.0 mRNA016466 X. tropicalis
NCBI 10.1 XBmRNA2542 X. laevis.L
ENSEMBL 10.0 ENSXETT00000074518 X. tropicalis
ENSEMBL 10.0 ENSXETT00000052107 X. tropicalis
JGI 9.1 Xelaev18006123m X. laevis.L
Xenbase 9.1 rna43881 X. tropicalis
Xenbase 9.2 rna53192 X. laevis.L
ENSEMBL 9.1 ENSXETT00000052107 X. tropicalis
ENSEMBL 9.1 ENSXETT00000074518 X. tropicalis
JGI 8.0 Xetrov14004014m X. tropicalis
JGI 7.1 Xetro.A02369.3 X. tropicalis
JGI 7.1 Xetro.A02369.4 X. tropicalis
JGI 7.1 Xetro.A02369.1 X. tropicalis
JGI 7.1 Xetro.A02369.2 X. tropicalis
JGI 7.2 Xelaev16064383m X. laevis.L
JGI 6.0 XeXenL6RMv10008171m X. laevis.L
JGI 6.0 XeXenL6RMv10036771m X. laevis.L
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_79000004 X. tropicalis
ENSEMBL 4.1 ENSXETT00000052107 X. tropicalis
JGI 4.1 e_gw1.79.156.1 X. tropicalis
JGI 4.1 e_gw1.79.157.1 X. tropicalis
JGI 4.1 e_gw1.79.186.1 X. tropicalis
JGI 4.1 gw1.79.156.1 X. tropicalis
JGI 4.1 gw1.79.157.1 X. tropicalis
JGI 4.1 gw1.79.186.1 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_79000007 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_79000065 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_79000066 X. tropicalis

mRNAs from cDNA libraries (18)

Clone Accession Species Library Anatomy Stage
NM_205825 X. tropicalis
TEgg082k23 CR848478 X. tropicalis
AY219904 X. tropicalis
IMAGE:7563096 BC157133 X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
XM_018091896 X. tropicalis
XM_012958724 X. tropicalis
XM_012958719 X. tropicalis
IMAGE:7764513 BC106537 X. laevis.L
AY040781 X. laevis.L
NM_001089220 X. laevis.L
XM_041573856 X. laevis.L
XM_041573810 X. laevis.L
XM_041573747 X. laevis.L
XM_041573701 X. laevis.L
XM_041573643 X. laevis.L
XM_041573587 X. laevis.L
XM_041573542 X. laevis.L
XM_041573501 X. laevis.L

ESTs (28)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:9013677 EL859220 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:7542004 CX448743 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7570806 CX455423 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7563096 CX467712 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7801023 DR833813 5' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7801065 DR833776 5' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7529315 CX425891 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:9013677 EL859221 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:7801023 DR833812 3' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7801065 DR833775 3' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7563096 CX467711 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7570806 CX455422 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7542004 CX448742 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
xl276h02 DC116534 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xlk140n19ex DC048776 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL494g24ex BP708387 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGp998N118294 BX846700 5' X. laevis.L NICHD_XGC_Emb3 whole organism NF stage 24 to NF stage 25
XL076k13 BJ063559 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:3746384 BF427097 5' X. laevis.L Xenopus laevis oocyte non normalized oocyte NF stage 5 (16-cell) to NF stage 6 (32-cell)
IMAGE:3398986 BE576135 5' X. laevis.L NICHD_XGC_Emb3 whole organism NF stage 24 to NF stage 25
PBX0160B03 AW646121 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
PBX0142E05 AW644645 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
rxl276h02 DC081575 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxlk140n19ex DC015507 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL494g24ex BP740326 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL076k13 BJ081734 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:3745454 BE679019 3' X. laevis.L Xenopus laevis oocyte non normalized oocyte NF stage 5 (16-cell) to NF stage 6 (32-cell)
IMAGE:3398986 BE507441 3' X. laevis.L NICHD_XGC_Emb3 whole organism NF stage 24 to NF stage 25