Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Phenotypes Gene Literature (0) GO Terms (10) Nucleotides (132) Proteins (52) Interactants (0) Wiki
XB-GENEPAGE-1014909

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for afg3l1 - All

RefSeq mRNAs(2)
Models - Gene (24)
Models - mRNA (35)
mRNAs (14)
ESTs (33)

RefSeq mRNAs (2)

Accession Version name Length Protein Species
NM_001015906 AFG3-like AAA ATPase 1 4234 bp NP_001015906 X. tropicalis
XM_041561156 XP_041417090.1 AFG3-like protein 1 isoform X4 3181 bp XP_041417090 X. laevis.S

Models - Gene (24)

Source Version Model Species
NCBI 10.0 XBXT10g004511 X. tropicalis
NCBI 10.1 XBXL10_1g21275 X. laevis.S
ENSEMBL 10.0 afg3l1p X. tropicalis
Xenbase 9.1 gene27103 X. tropicalis
Xenbase 9.2 gene11720 X. laevis.S
ENSEMBL 9.1 afg3l1p X. tropicalis
JGI 8.0 Xetrov14018628m.g X. tropicalis
JGI 7.1 Xetro.D00770 X. tropicalis
JGI 7.2 Xelaev16051206m.g X. laevis.S
JGI 6.0 XeXenL6RMv10009618m.g X. laevis.S
JGI 6.0 XeXenL6RMv10024212m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000019846 X. tropicalis
JGI 4.1 e_gw1.66.4.1 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_66000009 X. tropicalis
JGI 4.1 e_gw1.66.197.1 X. tropicalis
JGI 4.1 e_gw1.66.198.1 X. tropicalis
JGI 4.1 gw1.66.197.1 X. tropicalis
JGI 4.1 gw1.66.198.1 X. tropicalis
JGI 4.1 gw1.66.4.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_660004 X. tropicalis
JGI 4.1 estExt_Genewise1.C_660197 X. tropicalis
JGI 4.1 estExt_Genewise1.C_660198 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_660062 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_66000063 X. tropicalis

mRNAs based on gene models(35)

Source Version Model Species
NCBI 10.0 mRNA022428 X. tropicalis
NCBI 10.1 XBmRNA39368 X. laevis.S
ENSEMBL 10.0 ENSXETT00000082052 X. tropicalis
ENSEMBL 10.0 ENSXETT00000069558 X. tropicalis
ENSEMBL 10.0 ENSXETT00000082716 X. tropicalis
Xenbase 9.1 rna52888 X. tropicalis
Xenbase 9.2 rna34052 X. laevis.S
ENSEMBL 9.1 ENSXETT00000074583 X. tropicalis
ENSEMBL 9.1 ENSXETT00000042951 X. tropicalis
ENSEMBL 9.1 ENSXETT00000082052 X. tropicalis
ENSEMBL 9.1 ENSXETT00000069558 X. tropicalis
ENSEMBL 9.1 ENSXETT00000093211 X. tropicalis
ENSEMBL 9.1 ENSXETT00000082716 X. tropicalis
ENSEMBL 9.1 ENSXETT00000091726 X. tropicalis
ENSEMBL 9.1 ENSXETT00000087185 X. tropicalis
ENSEMBL 9.1 ENSXETT00000075321 X. tropicalis
ENSEMBL 9.1 ENSXETT00000102128 X. tropicalis
JGI 8.0 Xetrov14018628m X. tropicalis
JGI 7.1 Xetro.D00770.1 X. tropicalis
JGI 7.2 Xelaev16051206m X. laevis.S
JGI 6.0 XeXenL6RMv10009618m X. laevis.S
JGI 6.0 XeXenL6RMv10024212m X. laevis.S
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_66000009 X. tropicalis
ENSEMBL 4.1 ENSXETT00000042951 X. tropicalis
JGI 4.1 e_gw1.66.197.1 X. tropicalis
JGI 4.1 e_gw1.66.198.1 X. tropicalis
JGI 4.1 e_gw1.66.4.1 X. tropicalis
JGI 4.1 gw1.66.197.1 X. tropicalis
JGI 4.1 gw1.66.198.1 X. tropicalis
JGI 4.1 gw1.66.4.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_660004 X. tropicalis
JGI 4.1 estExt_Genewise1.C_660197 X. tropicalis
JGI 4.1 estExt_Genewise1.C_660198 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_660062 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_66000063 X. tropicalis

mRNAs from cDNA libraries (14)

Clone Accession Species Library Anatomy Stage
NM_001015906 X. tropicalis
TTpA010o23 CR926435 X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:9040046 BC170788 X. tropicalis
IMAGE:9040386 BC171124 X. tropicalis
DR868219 X. tropicalis
DN003098 X. tropicalis
CX936013 X. tropicalis
CX385067 X. tropicalis
CX323058 X. tropicalis
IMAGE:4033185 BC071038 X. laevis.S
XM_018260534 X. laevis.S
XM_018260533 X. laevis.S
XM_018260532 X. laevis.S
XM_041561156 X. laevis.S

ESTs (33)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7789877 CX323059 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7639411 CX385067 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7593881 CX330723 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
CAAO4692 CX936014 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7556149 CX503369 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7762204 DR884130 5' X. tropicalis NIH_XGC_tropTe6 testis frog
IMAGE:7689413 CX912640 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7688152 CX910758 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7688183 CX910640 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7523438 CX473353 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7586609 CX312522 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTbA024p12 CR420810 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA011f18 CR412658 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTpA010o23 BX704438 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7586609 CX312521 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
CAAO4692 CX936013 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7523438 CX473352 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7688152 CX910757 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7639411 DR903795 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7762204 DR884129 3' X. tropicalis NIH_XGC_tropTe6 testis frog
IMAGE:7689413 CX912639 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7688183 CX910639 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7556149 CX503368 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7593881 CX330722 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7789877 CX323058 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTbA024p12 CR420811 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA011f18 CR412659 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTpA010o23 BX704439 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7299697 CO383474 5' X. laevis.S Blumberg_Cho dorsal blastopore lip upper blastopore lip NF stage 7 to NF stage 9
XL150m14 BJ095578 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:6880756 CB208037 5' X. laevis.S NICHD_XGC_Tad1 whole organism NF stage 54 to prometamorphosis stage
IMAGE:4960194 BM192038 5' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:6880756 CB561998 3' X. laevis.S NICHD_XGC_Tad1 whole organism NF stage 54 to prometamorphosis stage