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Summary Expression Phenotypes Gene Literature (1) GO Terms (6) Nucleotides (98) Proteins (52) Interactants (41) Wiki
XB-GENEPAGE-1013641

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for smpd3 - All

RefSeq mRNAs(10)
Models - Gene (24)
Models - mRNA (33)
mRNAs (11)
ESTs (13)

RefSeq mRNAs (10)

Accession Version Protein Name Length Protein Species
XM_004913485 XM_004913485.4 sphingomyelin phosphodiesterase 3 3473 bp XP_004913542 X. tropicalis
XM_004913486 XM_004913486.4 sphingomyelin phosphodiesterase 3 3477 bp XP_004913543 X. tropicalis
XM_002939876 XM_002939876.5 sphingomyelin phosphodiesterase 3 3426 bp XP_002939922 X. tropicalis
XM_041589427 XM_041589427.1 XP_041445361.1 sphingomyelin phosphodiesterase 3 L homeolog isoform X1 3326 bp XP_041445361 X. laevis.L
XM_041589428 XM_041589428.1 XP_041445362.1 sphingomyelin phosphodiesterase 3 L homeolog isoform X1 3039 bp XP_041445362 X. laevis.L
XM_041589429 XM_041589429.1 XP_041445363.1 sphingomyelin phosphodiesterase 3 L homeolog isoform X1 3241 bp XP_041445363 X. laevis.L
XM_041561112 XM_041561112.1 XP_041417046.1 sphingomyelin phosphodiesterase 3 3151 bp XP_041417046 X. laevis.S
XM_041561113 XM_041561113.1 XP_041417047.1 sphingomyelin phosphodiesterase 3 3484 bp XP_041417047 X. laevis.S
XM_041561114 XM_041561114.1 XP_041417048.1 sphingomyelin phosphodiesterase 3 3480 bp XP_041417048 X. laevis.S
NM_001096194 NM_001096194.1 sphingomyelin phosphodiesterase 3 L homeolog 2701 bp NP_001089663 X. laevis.L

Models - Gene (24)

Source Version Model Species
NCBI 10.0 XBXT10g003518 X. tropicalis
NCBI 10.1 XBXL10_1g18546 X. laevis.L
NCBI 10.1 XBXL10_1g21145 X. laevis.S
ENSEMBL 10.0 smpd3 X. tropicalis
JGI 9.1 Xelaev18022478m.g X. laevis.L
JGI 9.1 Xelaev18024739m.g X. laevis.S
Xenbase 9.1 gene1609 X. tropicalis
Xenbase 9.2 gene3217 X. laevis.L
Xenbase 9.2 gene14034 X. laevis.S
ENSEMBL 9.1 smpd3 X. tropicalis
JGI 8.0 Xetrov14018278m.g X. tropicalis
JGI 7.1 Xetro.D00508 X. tropicalis
JGI 7.2 Xelaev16044676m.g X. laevis.L
JGI 6.0 XeXenL6RMv10035405m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000006675 X. tropicalis
JGI 4.1 C_scaffold_534000008 X. tropicalis
JGI 4.1 e_gw1.534.15.1 X. tropicalis
JGI 4.1 e_gw1.534.2.1 X. tropicalis
JGI 4.1 e_gw1.534.3.1 X. tropicalis
JGI 4.1 gw1.534.15.1 X. tropicalis
JGI 4.1 gw1.534.2.1 X. tropicalis
JGI 4.1 gw1.534.3.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_534000008 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_534000001 X. tropicalis

mRNAs based on gene models(33)

Source Version Model Species
NCBI 10.0 mRNA017870 X. tropicalis
NCBI 10.1 XBmRNA34141 X. laevis.L
NCBI 10.1 XBmRNA39169 X. laevis.S
ENSEMBL 10.0 ENSXETT00000069378 X. tropicalis
ENSEMBL 10.0 ENSXETT00000110747 X. tropicalis
ENSEMBL 10.0 ENSXETT00000014622 X. tropicalis
ENSEMBL 10.0 ENSXETT00000124554 X. tropicalis
ENSEMBL 10.0 ENSXETT00000063501 X. tropicalis
ENSEMBL 10.0 ENSXETT00000105877 X. tropicalis
ENSEMBL 10.0 ENSXETT00000110976 X. tropicalis
ENSEMBL 10.0 ENSXETT00000083837 X. tropicalis
ENSEMBL 10.0 ENSXETT00000014618 X. tropicalis
JGI 9.1 Xelaev18022478m X. laevis.L
JGI 9.1 Xelaev18024739m X. laevis.S
Xenbase 9.1 rna5271 X. tropicalis
Xenbase 9.2 rna9322 X. laevis.L
Xenbase 9.2 rna40888 X. laevis.S
ENSEMBL 9.1 ENSXETT00000014618 X. tropicalis
ENSEMBL 9.1 ENSXETT00000083837 X. tropicalis
JGI 8.0 Xetrov14018278m X. tropicalis
JGI 7.1 Xetro.D00508.1 X. tropicalis
JGI 7.2 Xelaev16044676m X. laevis.L
JGI 6.0 XeXenL6RMv10035405m X. laevis.L
JGI 4.1 C_scaffold_534000008 X. tropicalis
ENSEMBL 4.1 ENSXETT00000014618 X. tropicalis
JGI 4.1 e_gw1.534.15.1 X. tropicalis
JGI 4.1 e_gw1.534.2.1 X. tropicalis
JGI 4.1 e_gw1.534.3.1 X. tropicalis
JGI 4.1 gw1.534.15.1 X. tropicalis
JGI 4.1 gw1.534.2.1 X. tropicalis
JGI 4.1 gw1.534.3.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_534000008 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_534000001 X. tropicalis

mRNAs from cDNA libraries (11)

Clone Accession Species Library Anatomy Stage
XM_002939876 X. tropicalis
XM_004913486 X. tropicalis
XM_004913485 X. tropicalis
IMAGE:6325817 BC100234 X. laevis.L Wellcome CRC pSK egg egg unfertilized egg stage
NM_001096194 X. laevis.L
XM_041561114 X. laevis.S
XM_041561113 X. laevis.S
XM_041561112 X. laevis.S
XM_041589429 X. laevis.L
XM_041589428 X. laevis.L
XM_041589427 X. laevis.L

ESTs (13)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7657346 CX829518 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7668623 CX855932 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7711774 CX969097 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7786948 CX328920 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
XZT4648 CX400755 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTbA049h17 CR428203 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7786948 CX328919 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7711774 CX969096 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7657346 CX829517 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7668623 CX855931 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
TTbA049h17 CR428204 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:3399001 BE576667 5' X. laevis.L NICHD_XGC_Emb3 whole organism NF stage 24 to NF stage 25
IMAGE:6325817 CA973554 5' X. laevis.L Wellcome CRC pSK egg egg unfertilized egg stage