Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Phenotypes Gene Literature (0) GO Terms (10) Nucleotides (225) Proteins (89) Interactants (37) Wiki
XB-GENEPAGE-1013305

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for uso1 - Xenopus tropicalis

RefSeq mRNAs(4)
Models - Gene (25)
Models - mRNA (41)
mRNAs (4)
ESTs (40)

RefSeq mRNAs (4)

Accession Version name Length Protein Species
XM_002938625 XM_002938625.5 general vesicular transport factor p115 isoform X2 4431 bp XP_002938671 X. tropicalis
XM_004911078 XM_004911078.4 general vesicular transport factor p115 isoform X1 4443 bp XP_004911135 X. tropicalis
XM_004911079 XM_004911079.4 general vesicular transport factor p115 isoform X3 4421 bp XP_004911136 X. tropicalis
XM_004911080 XM_004911080.4 general vesicular transport factor p115 isoform X4 4409 bp XP_004911137 X. tropicalis

Models - Gene (25)

Source Version Model Species
NCBI 10.0 XBXT10g008898 X. tropicalis
ENSEMBL 10.0 uso1 X. tropicalis
Xenbase 9.1 gene6719 X. tropicalis
ENSEMBL 9.1 uso1 X. tropicalis
JGI 8.0 Xetrov14004079m.g X. tropicalis
JGI 7.1 Xetro.A02558 X. tropicalis
ENSEMBL 4.1 ENSXETG00000000333 X. tropicalis
JGI 4.1 C_scaffold_392000005 X. tropicalis
JGI 4.1 e_gw1.392.42.1 X. tropicalis
JGI 4.1 e_gw1.392.59.1 X. tropicalis
JGI 4.1 e_gw1.392.69.1 X. tropicalis
JGI 4.1 gw1.392.42.1 X. tropicalis
JGI 4.1 gw1.392.59.1 X. tropicalis
JGI 4.1 gw1.392.69.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3920042 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3920059 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3920069 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_3920003 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3920009 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3920010 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_3920003 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_392000003 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_392000009 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_392000010 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_392000003 X. tropicalis

mRNAs based on gene models(41)

Source Version Model Species
NCBI 10.0 mRNA044126 X. tropicalis
ENSEMBL 10.0 ENSXETT00000068473 X. tropicalis
ENSEMBL 10.0 ENSXETT00000081759 X. tropicalis
ENSEMBL 10.0 ENSXETT00000102036 X. tropicalis
ENSEMBL 10.0 ENSXETT00000087358 X. tropicalis
Xenbase 9.1 rna21703 X. tropicalis
ENSEMBL 9.1 ENSXETT00000102036 X. tropicalis
ENSEMBL 9.1 ENSXETT00000087358 X. tropicalis
ENSEMBL 9.1 ENSXETT00000081759 X. tropicalis
ENSEMBL 9.1 ENSXETT00000078783 X. tropicalis
ENSEMBL 9.1 ENSXETT00000094740 X. tropicalis
ENSEMBL 9.1 ENSXETT00000000699 X. tropicalis
ENSEMBL 9.1 ENSXETT00000084476 X. tropicalis
ENSEMBL 9.1 ENSXETT00000102735 X. tropicalis
ENSEMBL 9.1 ENSXETT00000094038 X. tropicalis
ENSEMBL 9.1 ENSXETT00000068473 X. tropicalis
JGI 8.0 Xetrov14004079m X. tropicalis
JGI 7.1 Xetro.A02558.4 X. tropicalis
JGI 7.1 Xetro.A02558.3 X. tropicalis
JGI 7.1 Xetro.A02558.2 X. tropicalis
JGI 7.1 Xetro.A02558.1 X. tropicalis
JGI 4.1 C_scaffold_392000005 X. tropicalis
ENSEMBL 4.1 ENSXETT00000000699 X. tropicalis
ENSEMBL 4.1 ENSXETT00000000702 X. tropicalis
JGI 4.1 e_gw1.392.42.1 X. tropicalis
JGI 4.1 e_gw1.392.59.1 X. tropicalis
JGI 4.1 e_gw1.392.69.1 X. tropicalis
JGI 4.1 gw1.392.42.1 X. tropicalis
JGI 4.1 gw1.392.59.1 X. tropicalis
JGI 4.1 gw1.392.69.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3920042 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3920059 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3920069 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_3920003 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3920009 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3920010 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_3920003 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_392000003 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_392000009 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_392000010 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_392000003 X. tropicalis

mRNAs from cDNA libraries (4)

Clone Accession Species Library Anatomy Stage
XM_002938625 X. tropicalis
XM_004911080 X. tropicalis
XM_004911079 X. tropicalis
XM_004911078 X. tropicalis

ESTs (40)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:9015031 EL861473 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8920513 EL834640 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8913452 EL825326 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8963438 EL656102 5' X. tropicalis NICHD_XGC_tropInt_66 intestine unspecified stage
IMAGE:7787872 CX333281 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7639408 CX385311 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7624643 CX402028 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7593985 CX330769 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7607294 CX367762 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
CAAN11345 CX927114 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7573705 CX437469 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7569928 CX453990 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7563227 CX467957 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7556047 CX503330 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7708674 CX962310 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7703343 CX939597 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7695775 CX924620 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7690971 CX915306 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7688015 CX910450 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7671110 CX879125 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7662425 CX844395 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7652671 CX820429 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7526978 CX444261 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TTbA080j23 CR442774 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA078o11 CR441615 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA075a18 CR424583 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA002m10 CR410364 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TNeu133g18 AL789722 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu016f24 AL643035 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7017498 CF524273 5' X. tropicalis NICHD_XGC_Swb1 whole organism frog
IMAGE:5383052 BQ394528 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:9015031 EL861474 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
CAAN11345 CX927113 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7688015 CX910449 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7652671 CX820428 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7799903 DN061296 3' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7690971 CX915305 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7563227 CX467956 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TTbA080j23 CR442775 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA075a18 CR424584 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30