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Summary Expression Phenotypes Gene Literature (0) GO Terms (2) Nucleotides (227) Proteins (110) Interactants (11) Wiki
XB-GENEPAGE-1013067

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for ppfibp2 - All

RefSeq mRNAs(25)
Models - Gene (28)
Models - mRNA (46)
mRNAs (27)
ESTs (43)

RefSeq mRNAs (25)

Accession Version Protein Name Length Protein Species
XM_031900509 XM_031900509.1 XP_031756369.1 liprin-beta-2 isoform X6 3715 bp XP_031756369 X. tropicalis
XM_031900510 XM_031900510.1 XP_031756370.1 liprin-beta-2 isoform X7 3681 bp XP_031756370 X. tropicalis
XM_031900511 XM_031900511.1 XP_031756371.1 liprin-beta-2 isoform X8 3700 bp XP_031756371 X. tropicalis
XM_031900512 XM_031900512.1 XP_031756372.1 liprin-beta-2 isoform X9 3502 bp XP_031756372 X. tropicalis
XM_031900513 XM_031900513.1 XP_031756373.1 liprin-beta-2 isoform X10 3482 bp XP_031756373 X. tropicalis
XM_031900514 XM_031900514.1 XP_031756374.1 liprin-beta-2 isoform X11 3244 bp XP_031756374 X. tropicalis
XM_031900515 XM_031900515.1 XP_031756375.1 liprin-beta-2 isoform X12 3254 bp XP_031756375 X. tropicalis
XM_012962176 XM_012962176.3 liprin-beta-2 isoform X2 3875 bp XP_012817630 X. tropicalis
XM_031900504 XM_031900504.1 XP_031756364.1 liprin-beta-2 isoform X1 3910 bp XP_031756364 X. tropicalis
XM_031900505 XM_031900505.1 XP_031756365.1 liprin-beta-2 isoform X1 3823 bp XP_031756365 X. tropicalis
XM_031900506 XM_031900506.1 XP_031756366.1 liprin-beta-2 isoform X3 3876 bp XP_031756366 X. tropicalis
XM_031900507 XM_031900507.1 XP_031756367.1 liprin-beta-2 isoform X4 3869 bp XP_031756367 X. tropicalis
XM_031900508 XM_031900508.1 XP_031756368.1 liprin-beta-2 isoform X5 3843 bp XP_031756368 X. tropicalis
XM_041560912 XM_041560912.1 XP_041416846.1 liprin-beta-2 isoform X7 3696 bp XP_041416846 X. laevis.S
NM_001093649 NM_001093649.1 PTPRF interacting protein, binding protein 2 (liprin beta 2) L homeolog 4779 bp NP_001087118 X. laevis.L
XM_041560913 XM_041560913.1 XP_041416847.1 liprin-beta-2 isoform X8 3603 bp XP_041416847 X. laevis.S
XM_041560914 XM_041560914.1 XP_041416848.1 liprin-beta-2 isoform X9 3454 bp XP_041416848 X. laevis.S
XM_041560915 XM_041560915.1 XP_041416849.1 liprin-beta-2 isoform X10 3656 bp XP_041416849 X. laevis.S
XM_041560916 XM_041560916.1 XP_041416850.1 liprin-beta-2 isoform X11 3361 bp XP_041416850 X. laevis.S
XM_041560906 XM_041560906.1 XP_041416840.1 liprin-beta-2 isoform X1 3926 bp XP_041416840 X. laevis.S
XM_041560907 XM_041560907.1 XP_041416841.1 liprin-beta-2 isoform X2 3890 bp XP_041416841 X. laevis.S
XM_041560908 XM_041560908.1 XP_041416842.1 liprin-beta-2 isoform X3 3892 bp XP_041416842 X. laevis.S
XM_041560909 XM_041560909.1 XP_041416843.1 liprin-beta-2 isoform X4 3886 bp XP_041416843 X. laevis.S
XM_041560910 XM_041560910.1 XP_041416844.1 liprin-beta-2 isoform X5 3730 bp XP_041416844 X. laevis.S
XM_041560911 XM_041560911.1 XP_041416845.1 liprin-beta-2 isoform X6 3835 bp XP_041416845 X. laevis.S

Models - Gene (28)

Source Version Model Species
NCBI 10.0 XBXT10g010875 X. tropicalis
NCBI 10.1 XBXL10_1g11378 X. laevis.L
NCBI 10.1 XBXL10_1g20845 X. laevis.S
ENSEMBL 10.0 ppfibp2 X. tropicalis
Xenbase 9.1 gene5808 X. tropicalis
Xenbase 9.2 gene45717 X. laevis.L
ENSEMBL 9.1 ppfibp2 X. tropicalis
JGI 7.1 Xetro.D00363 X. tropicalis
JGI 7.2 Xelaev16052458m.g X. laevis.L
JGI 6.0 XeXenL6RMv10003069m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000009056 X. tropicalis
JGI 4.1 C_scaffold_335000005 X. tropicalis
JGI 4.1 e_gw1.335.1.1 X. tropicalis
JGI 4.1 e_gw1.335.22.1 X. tropicalis
JGI 4.1 e_gw1.335.55.1 X. tropicalis
JGI 4.1 e_gw1.335.6.1 X. tropicalis
JGI 4.1 gw1.335.1.1 X. tropicalis
JGI 4.1 gw1.335.55.1 X. tropicalis
JGI 4.1 gw1.335.6.1 X. tropicalis
JGI 4.1 gw1.335.22.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_3350009 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3350001 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3350022 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3350055 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3350013 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_335000002 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_335000003 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_335000013 X. tropicalis

mRNAs based on gene models(46)

Source Version Model Species
NCBI 10.0 mRNA053883 X. tropicalis
NCBI 10.1 XBmRNA21380 X. laevis.L
NCBI 10.1 XBmRNA38404 X. laevis.S
ENSEMBL 10.0 ENSXETT00000019847 X. tropicalis
ENSEMBL 10.0 ENSXETT00000095029 X. tropicalis
ENSEMBL 10.0 ENSXETT00000064143 X. tropicalis
ENSEMBL 10.0 ENSXETT00000076623 X. tropicalis
ENSEMBL 10.0 ENSXETT00000093193 X. tropicalis
ENSEMBL 10.0 ENSXETT00000089567 X. tropicalis
ENSEMBL 10.0 ENSXETT00000089547 X. tropicalis
ENSEMBL 10.0 ENSXETT00000099122 X. tropicalis
ENSEMBL 10.0 ENSXETT00000089842 X. tropicalis
ENSEMBL 10.0 ENSXETT00000069042 X. tropicalis
Xenbase 9.1 rna18796 X. tropicalis
Xenbase 9.2 rna90220 X. laevis.L
ENSEMBL 9.1 ENSXETT00000064143 X. tropicalis
ENSEMBL 9.1 ENSXETT00000019847 X. tropicalis
ENSEMBL 9.1 ENSXETT00000076623 X. tropicalis
ENSEMBL 9.1 ENSXETT00000093193 X. tropicalis
ENSEMBL 9.1 ENSXETT00000089567 X. tropicalis
ENSEMBL 9.1 ENSXETT00000095029 X. tropicalis
ENSEMBL 9.1 ENSXETT00000089842 X. tropicalis
ENSEMBL 9.1 ENSXETT00000099122 X. tropicalis
ENSEMBL 9.1 ENSXETT00000089547 X. tropicalis
ENSEMBL 9.1 ENSXETT00000069042 X. tropicalis
JGI 7.1 Xetro.D00363.1 X. tropicalis
JGI 7.2 Xelaev16052458m X. laevis.L
JGI 6.0 XeXenL6RMv10003069m X. laevis.L
JGI 4.1 C_scaffold_335000005 X. tropicalis
ENSEMBL 4.1 ENSXETT00000019847 X. tropicalis
JGI 4.1 e_gw1.335.1.1 X. tropicalis
JGI 4.1 e_gw1.335.22.1 X. tropicalis
JGI 4.1 e_gw1.335.55.1 X. tropicalis
JGI 4.1 e_gw1.335.6.1 X. tropicalis
JGI 4.1 gw1.335.1.1 X. tropicalis
JGI 4.1 gw1.335.55.1 X. tropicalis
JGI 4.1 gw1.335.6.1 X. tropicalis
JGI 4.1 gw1.335.22.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_3350009 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3350001 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3350022 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3350055 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3350013 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_335000002 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_335000003 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_335000013 X. tropicalis

mRNAs from cDNA libraries (27)

Clone Accession Species Library Anatomy Stage
TGas021d03 CR926392 X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
XM_012962176 X. tropicalis
XM_031900515 X. tropicalis
XM_031900514 X. tropicalis
XM_031900513 X. tropicalis
XM_031900512 X. tropicalis
XM_031900511 X. tropicalis
XM_031900510 X. tropicalis
XM_031900509 X. tropicalis
XM_031900508 X. tropicalis
XM_031900507 X. tropicalis
XM_031900506 X. tropicalis
XM_031900505 X. tropicalis
XM_031900504 X. tropicalis
IMAGE:4963336 BC078009 X. laevis.L
NM_001093649 X. laevis.L
XM_041560916 X. laevis.S
XM_041560915 X. laevis.S
XM_041560914 X. laevis.S
XM_041560913 X. laevis.S
XM_041560912 X. laevis.S
XM_041560911 X. laevis.S
XM_041560910 X. laevis.S
XM_041560909 X. laevis.S
XM_041560908 X. laevis.S
XM_041560907 X. laevis.S
XM_041560906 X. laevis.S

ESTs (43)

Clone Accession 5'/3' Species Library Anatomy Stage
TGas021d03 AL632748 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:8885040 EL841248 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:7741029 DN031794 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7556840 CX505137 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7555988 CX503885 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:8955061 EL655893 5' X. tropicalis NICHD_XGC_tropInt_62 intestine frog
IMAGE:8955062 EL658129 5' X. tropicalis NICHD_XGC_tropInt_62 intestine frog
IMAGE:8956069 EL660632 5' X. tropicalis NICHD_XGC_tropInt_62 intestine frog
IMAGE:8956902 EL662877 5' X. tropicalis NICHD_XGC_tropInt_62 intestine frog
IMAGE:8852827 EL825330 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
xthr39K11 CN112728 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TTbA003j09 CR408281 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA057c23 CR446455 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7529345 CX426011 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TTpA056l13 BX726335 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA078m08 BX736104 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:8885040 EL841249 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:7741029 DN031793 3' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:8852827 EL825331 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
TGas135g21 BX763190 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
xthr39K11 CN112727 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TTbA003j09 CR408282 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7555988 CX503884 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7556840 CX505136 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7738305 DN026540 3' X. tropicalis NIH_XGC_tropLiv1 liver frog
TTpA056l13 BX726336 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA078m08 BX736105 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
XL181i09 BJ617621 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL201k13 BJ622624 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL218i07 BJ627561 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:8322143 DY546830 5' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
xlk128e08ex DC044686 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xl226o14 DC101730 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
BE025813 BE025813 5' X. laevis.L Xenopus laevis oocyte oocyte NF stage 5 (16-cell) to NF stage 6 (32-cell)
IMAGE:4957568 BI313375 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:6930965 CB942287 5' X. laevis.L NICHD_XGC_Tad2 whole organism NF stage 62
IMAGE:6935961 CB984171 5' X. laevis.L NICHD_XGC_Tad2 whole organism NF stage 62
IMAGE:6935961 CD811385 5' X. laevis.L NICHD_XGC_Tad2 whole organism NF stage 62
XL084b02 BJ065760 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL084b02 BJ083089 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL181i09 BJ634113 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL218i07 BJ643860 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
BE026585 BE026585 3' X. laevis.L Xenopus laevis oocyte oocyte NF stage 5 (16-cell) to NF stage 6 (32-cell)