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Summary Expression Phenotypes Gene Literature (0) GO Terms (76) Nucleotides (150) Proteins (56) Interactants (95) Wiki
XB-GENEPAGE-1012764

Show:     All X. tropicalis X. laevis

Nucleotide sequences for atg5 - All

RefSeq mRNAs(9)
Models - Gene (25)
Models - mRNA (31)
mRNAs (14)
ESTs (39)

RefSeq mRNAs (9)

Accession Version Protein Name Length Protein Species
NM_001016445 NM_001016445.2 autophagy protein 5 1448 bp NP_001016445 X. tropicalis
XM_012962998 XM_012962998.3 autophagy protein 5 isoform X1 1383 bp XP_012818452 X. tropicalis
XM_012962999 XM_012962999.3 autophagy protein 5 isoform X1 1379 bp XP_012818453 X. tropicalis
XM_012963001 XM_012963001.3 autophagy protein 5 isoform X1 1382 bp XP_012818455 X. tropicalis
XM_012963004 XM_012963004.3 autophagy protein 5 isoform X2 2623 bp XP_012818458 X. tropicalis
XM_012963005 XM_012963005.3 autophagy protein 5 isoform X3 1536 bp XP_012818459 X. tropicalis
XM_031901703 XM_031901703.1 XP_031757563.1 autophagy protein 5 isoform X4 889 bp XP_031757563 X. tropicalis
XM_031901704 XM_031901704.1 XP_031757564.1 autophagy protein 5 isoform X5 1458 bp XP_031757564 X. tropicalis
NM_001091862 NM_001091862.1 autophagy related 5 L homeolog 1557 bp NP_001085331 X. laevis.L

Models - Gene (25)

Source Version Model Species
NCBI 10.1 XBXL10_1g23512 X. laevis.L
NCBI 10.0 XBXT10g014978 X. tropicalis
ENSEMBL 10.0 atg5 X. tropicalis
Xenbase 9.2 gene9664 X. laevis.L
JGI 9.1 Xelaev18027227m.g X. laevis.L
Xenbase 9.1 gene427 X. tropicalis
ENSEMBL 9.1 atg5 X. tropicalis
JGI 7.2 Xelaev16076445m.g X. laevis.L
JGI 7.1 Xetro.E00633 X. tropicalis
JGI 6.0 XeXenL6RMv10050236m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000008672 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_269000001 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_269000001 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_269000008 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_269000009 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_269000002 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2690009 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_2690001 X. tropicalis
JGI 4.1 gw1.269.8.1 X. tropicalis
JGI 4.1 gw1.269.69.1 X. tropicalis
JGI 4.1 gw1.269.55.1 X. tropicalis
JGI 4.1 e_gw1.269.8.1 X. tropicalis
JGI 4.1 e_gw1.269.69.1 X. tropicalis
JGI 4.1 e_gw1.269.55.1 X. tropicalis
JGI 4.1 C_scaffold_269000004 X. tropicalis

mRNAs based on gene models(31)

Source Version Model Species
NCBI 10.1 XBmRNA43892 X. laevis.L
ENSEMBL 10.0 ENSXETT00000116266 X. tropicalis
ENSEMBL 10.0 ENSXETT00000110018 X. tropicalis
ENSEMBL 10.0 ENSXETT00000018985 X. tropicalis
ENSEMBL 10.0 ENSXETT00000110360 X. tropicalis
ENSEMBL 10.0 ENSXETT00000065030 X. tropicalis
NCBI 10.0 mRNA074091 X. tropicalis
Xenbase 9.2 rna28117 X. laevis.L
ENSEMBL 9.1 ENSXETT00000065030 X. tropicalis
ENSEMBL 9.1 ENSXETT00000018985 X. tropicalis
Xenbase 9.1 rna1334 X. tropicalis
JGI 9.1 Xelaev18027227m X. laevis.L
JGI 7.2 Xelaev16076445m X. laevis.L
JGI 7.1 Xetro.E00633.1 X. tropicalis
JGI 7.1 Xetro.E00633.2 X. tropicalis
JGI 6.0 XeXenL6RMv10050236m X. laevis.L
JGI 4.1 fgenesh1_pg.C_scaffold_269000008 X. tropicalis
JGI 4.1 e_gw1.269.55.1 X. tropicalis
JGI 4.1 e_gw1.269.69.1 X. tropicalis
JGI 4.1 e_gw1.269.8.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000018985 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_2690001 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2690009 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_269000001 X. tropicalis
JGI 4.1 C_scaffold_269000004 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_269000009 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_269000002 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_269000001 X. tropicalis
JGI 4.1 gw1.269.55.1 X. tropicalis
JGI 4.1 gw1.269.69.1 X. tropicalis
JGI 4.1 gw1.269.8.1 X. tropicalis

mRNAs from cDNA libraries (14)

Clone Accession Species Library Anatomy Stage
IMAGE:7809748 BC161566 X. tropicalis
TEgg056l08 CR761013 X. tropicalis
TTbA029c16 CU075372 X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
NM_001016445 X. tropicalis
XM_012962998 X. tropicalis
XM_012962999 X. tropicalis
XM_012963001 X. tropicalis
XM_012963004 X. tropicalis
XM_012963005 X. tropicalis
XM_031901703 X. tropicalis
XM_031901704 X. tropicalis
AM087016 X. laevis.L
IMAGE:6317143 BC071093 X. laevis.L
NM_001091862 X. laevis.L

ESTs (39)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7628638 CX382816 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7615993 CX392554 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TGas047g04 AL646136 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas049h21 AL649492 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas030p20 AL650018 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
st74n09 DC185170 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
xthr37L14 CN111972 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGE:7666098 CX852410 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7543420 CX458912 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TTbA029c16 CR412265 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
THdA031b24 CR574125 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA041f04 CR583434 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7645664 CX802529 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7646630 CX804621 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7805708 DR842088 5' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7645664 CX802528 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7543420 CX458911 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7646630 CX804620 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
THdA041f04 CR583435 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7666098 CX852409 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
rst74n09 DC155027 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
xthr37L14 CN111971 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGE:7628638 CX382815 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7805708 DR842087 3' X. tropicalis NIH_XGC_tropFat1 fat body frog
TTbA029c16 CR412266 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:8643721 EB729856 5' X. laevis.L NICHD_XGC_skin_m skin unspecified stage
IMAGE:4678164 BI477654 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:5156694 CA790344 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
XL018o19 BJ036249 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL046g18 BJ040419 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL166c12 BJ614002 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL168l10 BJ614598 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:6871817 CB196963 5' X. laevis.L NICHD_XGC_Tad2 whole organism NF stage 62
XL166c12 BJ630655 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL046g18 BJ054797 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL018o19 BJ048174 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:4678164 BI445674 3' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:6871817 CB564494 3' X. laevis.L NICHD_XGC_Tad2 whole organism NF stage 62
XL168l10 BJ631293 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5