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Summary Expression Phenotypes Gene Literature (0) GO Terms (14) Nucleotides (106) Proteins (41) Interactants (38) Wiki
XB-GENEPAGE-1012274

Show:     All X. tropicalis X. laevis

Nucleotide sequences for gtf3c5 - All

RefSeq mRNAs(3)
Models - Gene (27)
Models - mRNA (33)
mRNAs (4)
ESTs (15)

RefSeq mRNAs (3)

Accession Version Protein Name Length Protein Species
XM_002936193 XM_002936193.5 general transcription factor 3C polypeptide 5 isoform X1 1666 bp XP_002936239 X. tropicalis
XM_012968929 XM_012968929.3 general transcription factor 3C polypeptide 5 isoform X2 1646 bp XP_012824383 X. tropicalis
XM_018232629 XM_018232629.2 general transcription factor 3C polypeptide 5 2202 bp XP_018088118 X. laevis.S

Models - Gene (27)

Source Version Model Species
NCBI 10.1 XBXL10_1g37603 X. laevis.S
NCBI 10.0 XBXT10g008203 X. tropicalis
ENSEMBL 10.0 gtf3c5 X. tropicalis
Xenbase 9.2 gene8773 X. laevis.S
JGI 9.1 Xelaev18041600m.g X. laevis.S
Xenbase 9.1 gene24411 X. tropicalis
ENSEMBL 9.1 gtf3c5 X. tropicalis
JGI 8.0 Xetrov14032403m.g X. tropicalis
JGI 7.2 Xelaev16074441m.g X. laevis.S
JGI 7.1 Xetro.H00114 X. tropicalis
JGI 6.0 XeXenL6RMv10008803m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000006264 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1910247 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1910005 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1910002 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_191000005 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_191000002 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1910214 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1910152 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1910004 X. tropicalis
JGI 4.1 gw1.191.248.1 X. tropicalis
JGI 4.1 gw1.191.215.1 X. tropicalis
JGI 4.1 gw1.191.153.1 X. tropicalis
JGI 4.1 e_gw1.191.248.1 X. tropicalis
JGI 4.1 e_gw1.191.215.1 X. tropicalis
JGI 4.1 e_gw1.191.153.1 X. tropicalis
JGI 4.1 C_scaffold_191000004 X. tropicalis

mRNAs based on gene models(33)

Source Version Model Species
NCBI 10.1 XBmRNA70997 X. laevis.S
NCBI 10.0 mRNA040771 X. tropicalis
ENSEMBL 10.0 ENSXETT00000092466 X. tropicalis
ENSEMBL 10.0 ENSXETT00000092929 X. tropicalis
Xenbase 9.2 rna25541 X. laevis.S
Xenbase 9.1 rna48609 X. tropicalis
ENSEMBL 9.1 ENSXETT00000092929 X. tropicalis
ENSEMBL 9.1 ENSXETT00000100662 X. tropicalis
ENSEMBL 9.1 ENSXETT00000013729 X. tropicalis
ENSEMBL 9.1 ENSXETT00000070616 X. tropicalis
ENSEMBL 9.1 ENSXETT00000092466 X. tropicalis
JGI 9.1 Xelaev18041600m X. laevis.S
JGI 8.0 Xetrov14032403m X. tropicalis
JGI 7.2 Xelaev16074441m X. laevis.S
JGI 7.1 Xetro.H00114.2 X. tropicalis
JGI 7.1 Xetro.H00114.1 X. tropicalis
JGI 6.0 XeXenL6RMv10008803m X. laevis.S
JGI 4.1 estExt_Genewise1.C_1910214 X. tropicalis
JGI 4.1 e_gw1.191.153.1 X. tropicalis
JGI 4.1 e_gw1.191.215.1 X. tropicalis
JGI 4.1 e_gw1.191.248.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000013729 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1910005 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1910002 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1910004 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1910152 X. tropicalis
JGI 4.1 C_scaffold_191000004 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1910247 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_191000005 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_191000002 X. tropicalis
JGI 4.1 gw1.191.153.1 X. tropicalis
JGI 4.1 gw1.191.215.1 X. tropicalis
JGI 4.1 gw1.191.248.1 X. tropicalis

mRNAs from cDNA libraries (4)

Clone Accession Species Library Anatomy Stage
XM_002936193 X. tropicalis
XM_012968929 X. tropicalis
XM_018232629 X. laevis.S
XR_001932899 X. laevis.S

ESTs (15)

Clone Accession 5'/3' Species Library Anatomy Stage
TTpA062d06 BX739142 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
THdA040e17 CR580056 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7804555 DR839710 5' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:8954478 EL652478 5' X. tropicalis NICHD_XGC_tropInt_62 intestine frog
IMAGE:7804555 DR839709 3' X. tropicalis NIH_XGC_tropFat1 fat body frog
THdA040e17 CR580057 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTpA062d06 BX739143 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:3379436 BF048345 5' X. laevis.S Wellcome CRC pSK egg egg unfertilized egg stage
IMAGE:4783795 BM262542 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:8318947 DY559991 5' X. laevis.S NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:8320584 DY567320 5' X. laevis.S NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
rxl304g06 DC089456 3' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
IMAGE:5278991 BQ398773 3' X. laevis.S Soares NXEG egg unfertilized egg stage
IMAGE:4783795 BM262194 3' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:3379436 BF049451 3' X. laevis.S Wellcome CRC pSK egg egg unfertilized egg stage