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Summary Expression Phenotypes Gene Literature (0) GO Terms (2) Nucleotides (153) Proteins (54) Interactants (11) Wiki
XB-GENEPAGE-1010397

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for cachd1 - All

RefSeq mRNAs(1)
Models - Gene (33)
Models - mRNA (38)
mRNAs (4)
ESTs (63)

RefSeq mRNAs (1)

Accession Version name Length Protein Species
XM_041561363 XM_041561363.1 XP_041417297.1 VWFA and cache domain-containing protein 1 isoform X2 4855 bp XP_041417297 X. laevis.S

Models - Gene (33)

Source Version Model Species
NCBI 10.0 XBXT10g008248 X. tropicalis
NCBI 10.1 XBXL10_1g21569 X. laevis.S
NCBI 10.1 XBXL10_1g19069 X. laevis.L
ENSEMBL 10.0 cachd1 X. tropicalis
JGI 9.1 Xelaev18025125m.g X. laevis.S
JGI 9.1 Xelaev18022990m.g X. laevis.L
Xenbase 9.1 gene97 X. tropicalis
Xenbase 9.2 gene34379 X. laevis.S
Xenbase 9.2 gene50739 X. laevis.L
ENSEMBL 9.1 cachd1 X. tropicalis
JGI 7.1 Xetro.D01816 X. tropicalis
JGI 6.0 XeXenL6RMv10047984m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000020410 X. tropicalis
JGI 4.1 C_scaffold_4000037 X. tropicalis
JGI 4.1 e_gw1.4.17.1 X. tropicalis
JGI 4.1 e_gw1.4.196.1 X. tropicalis
JGI 4.1 e_gw1.4.296.1 X. tropicalis
JGI 4.1 e_gw1.4.305.1 X. tropicalis
JGI 4.1 e_gw1.4.95.1 X. tropicalis
JGI 4.1 gw1.4.17.1 X. tropicalis
JGI 4.1 gw1.4.196.1 X. tropicalis
JGI 4.1 gw1.4.296.1 X. tropicalis
JGI 4.1 gw1.4.305.1 X. tropicalis
JGI 4.1 gw1.4.95.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_40072 X. tropicalis
JGI 4.1 estExt_Genewise1.C_40095 X. tropicalis
JGI 4.1 estExt_Genewise1.C_40296 X. tropicalis
JGI 4.1 estExt_Genewise1.C_40305 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_40147 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_40042 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_4000148 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_4000149 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_4000043 X. tropicalis

mRNAs based on gene models(38)

Source Version Model Species
NCBI 10.0 mRNA040995 X. tropicalis
NCBI 10.1 XBmRNA35201 X. laevis.L
NCBI 10.1 XBmRNA39973 X. laevis.S
ENSEMBL 10.0 ENSXETT00000072521 X. tropicalis
ENSEMBL 10.0 ENSXETT00000071574 X. tropicalis
ENSEMBL 10.0 ENSXETT00000044037 X. tropicalis
JGI 9.1 Xelaev18022990m X. laevis.L
JGI 9.1 Xelaev18025125m X. laevis.S
Xenbase 9.1 rna288 X. tropicalis
Xenbase 9.2 rna97372 X. laevis.L
Xenbase 9.2 rna73915 X. laevis.S
ENSEMBL 9.1 ENSXETT00000071574 X. tropicalis
ENSEMBL 9.1 ENSXETT00000072521 X. tropicalis
ENSEMBL 9.1 ENSXETT00000044037 X. tropicalis
JGI 7.1 Xetro.D01816.1 X. tropicalis
JGI 7.1 Xetro.D01816.2 X. tropicalis
JGI 6.0 XeXenL6RMv10047984m X. laevis.S
JGI 4.1 C_scaffold_4000037 X. tropicalis
ENSEMBL 4.1 ENSXETT00000044037 X. tropicalis
JGI 4.1 e_gw1.4.17.1 X. tropicalis
JGI 4.1 e_gw1.4.196.1 X. tropicalis
JGI 4.1 e_gw1.4.296.1 X. tropicalis
JGI 4.1 e_gw1.4.305.1 X. tropicalis
JGI 4.1 e_gw1.4.95.1 X. tropicalis
JGI 4.1 gw1.4.17.1 X. tropicalis
JGI 4.1 gw1.4.196.1 X. tropicalis
JGI 4.1 gw1.4.296.1 X. tropicalis
JGI 4.1 gw1.4.305.1 X. tropicalis
JGI 4.1 gw1.4.95.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_40072 X. tropicalis
JGI 4.1 estExt_Genewise1.C_40095 X. tropicalis
JGI 4.1 estExt_Genewise1.C_40296 X. tropicalis
JGI 4.1 estExt_Genewise1.C_40305 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_40147 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_40042 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_4000148 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_4000149 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_4000043 X. tropicalis

mRNAs from cDNA libraries (4)

Clone Accession Species Library Anatomy Stage
XM_002931614 X. tropicalis
XM_018260763 X. laevis.S
XM_018258236 X. laevis.L
XM_041561363 X. laevis.S

ESTs (63)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8889969 EL848939 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8940082 EL644291 5' X. tropicalis NICHD_XGC_tropBone1 bone tissue frog
XZT13918 CX322537 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7576632 CX422448 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7610830 CX377825 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7609402 CX410880 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7531824 CX432407 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7750656 DN050032 5' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
IMAGE:7550694 CX509733 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7688147 CX910364 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7584960 CX416013 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7585669 CX318279 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
THdA026e13 CR573599 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TNeu108n01 AL790450 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu078l20 AL779922 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu078l18 AL779921 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:5384341 BQ397149 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:8889969 EL848940 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:7585669 CX318278 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7610830 CX377824 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7688147 CX910363 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7750656 DN050031 3' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
IMAGE:7550694 CX509732 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7531824 CX432406 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7575881 CX430919 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7584960 CX416012 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7609402 CX410879 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTbA053l07 CR443752 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA077l06 CR443514 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TNeu054d07 BX700085 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu108n01 BX693490 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu078l20 BX686930 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu078l18 BX686928 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:5384341 BQ397148 3' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
XL517p19ex BP706505 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL219f07 BJ627776 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL168g04 BJ614507 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL091l17 BJ070795 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL052n04 BJ069409 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL059e10 BJ058417 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL058c13 BJ058052 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL019o19 BJ033149 5' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:6933781 CB944115 5' X. laevis.S NICHD_XGC_Tad2 whole organism NF stage 62
IMAGE:6878460 CB206631 5' X. laevis.S NICHD_XGC_Tad1 whole organism NF stage 54 to prometamorphosis stage
IMAGE:3747590 BE680994 5' X. laevis.S Xenopus laevis gastrula non normalized whole organism NF stage 10.5 to NF stage 11.5
IMAGE:3745220 BE680179 5' X. laevis.S Xenopus laevis oocyte non normalized oocyte NF stage 5 (16-cell) to NF stage 6 (32-cell)
IMAGE:3745198 BE680170 5' X. laevis.S Xenopus laevis oocyte non normalized oocyte NF stage 5 (16-cell) to NF stage 6 (32-cell)
IMAGE:3745126 BE680141 5' X. laevis.S Xenopus laevis oocyte non normalized oocyte NF stage 5 (16-cell) to NF stage 6 (32-cell)
IMAGE:3745102 BE680133 5' X. laevis.S Xenopus laevis oocyte non normalized oocyte NF stage 5 (16-cell) to NF stage 6 (32-cell)
IMAGE:3301415 BE132328 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
PBX0114D09 AW642144 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
PBX0021C03 AW634478 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
XL517p19ex BP738898 3' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL219f07 BJ644066 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL168g04 BJ631197 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL091l17 BJ088069 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL052n04 BJ086354 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL059e10 BJ076922 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL058c13 BJ076597 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL019o19 BJ048457 3' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:6878460 CB560986 3' X. laevis.S NICHD_XGC_Tad1 whole organism NF stage 54 to prometamorphosis stage
IMAGE:3747590 BF025335 3' X. laevis.S Xenopus laevis gastrula non normalized whole organism NF stage 10.5 to NF stage 11.5
IMAGE:3745222 BE678742 3' X. laevis.S Xenopus laevis oocyte non normalized oocyte NF stage 5 (16-cell) to NF stage 6 (32-cell)