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Summary Expression Phenotypes Gene Literature (2) GO Terms (6) Nucleotides (152) Proteins (52) Interactants (23) Wiki
XB-GENEPAGE-1010028

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for ppox - Xenopus tropicalis

RefSeq mRNAs(4)
Models - Gene (24)
Models - mRNA (33)
mRNAs (6)
ESTs (37)

RefSeq mRNAs (4)

Accession Version name Length Protein Species
XM_002942432 XM_002942432.4 protoporphyrinogen oxidase isoform X1 1858 bp XP_002942478 X. tropicalis
NM_001428236 NM_001428236.1 NP_001415165.1 protoporphyrinogen oxidase 1799 bp NP_001415165 X. tropicalis
XM_031891593 XM_031891593.1 XP_031747453.1 protoporphyrinogen oxidase isoform X2 1482 bp XP_031747453 X. tropicalis
XM_031891594 XM_031891594.1 XP_031747454.1 protoporphyrinogen oxidase isoform X3 1468 bp XP_031747454 X. tropicalis

Models - Gene (24)

Source Version Model Species
NCBI 10.0 XBXT10g003739 X. tropicalis
ENSEMBL 10.0 ppox X. tropicalis
Xenbase 9.1 gene7422 X. tropicalis
ENSEMBL 9.1 ppox X. tropicalis
JGI 8.0 Xetrov14036649m.g X. tropicalis
JGI 7.1 Xetro.K02150 X. tropicalis
ENSEMBL 4.1 ENSXETG00000017673 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_9890007 X. tropicalis
JGI 4.1 e_gw1.989.43.1 X. tropicalis
JGI 4.1 e_gw1.989.64.1 X. tropicalis
JGI 4.1 e_gw1.989.73.1 X. tropicalis
JGI 4.1 gw1.989.43.1 X. tropicalis
JGI 4.1 gw1.989.64.1 X. tropicalis
JGI 4.1 gw1.989.73.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_9890005 X. tropicalis
JGI 4.1 estExt_Genewise1.C_9890043 X. tropicalis
JGI 4.1 estExt_Genewise1.C_9890064 X. tropicalis
JGI 4.1 estExt_Genewise1.C_9890073 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_9890002 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_9890006 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_9890003 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_989000002 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_989000006 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_989000007 X. tropicalis

mRNAs based on gene models(33)

Source Version Model Species
NCBI 10.0 mRNA018860 X. tropicalis
ENSEMBL 10.0 ENSXETT00000103440 X. tropicalis
ENSEMBL 10.0 ENSXETT00000038355 X. tropicalis
ENSEMBL 10.0 ENSXETT00000078374 X. tropicalis
ENSEMBL 10.0 ENSXETT00000087989 X. tropicalis
Xenbase 9.1 rna23946 X. tropicalis
ENSEMBL 9.1 ENSXETT00000038355 X. tropicalis
ENSEMBL 9.1 ENSXETT00000078374 X. tropicalis
ENSEMBL 9.1 ENSXETT00000087989 X. tropicalis
ENSEMBL 9.1 ENSXETT00000103440 X. tropicalis
ENSEMBL 9.1 ENSXETT00000081282 X. tropicalis
JGI 8.0 Xetrov14036649m X. tropicalis
JGI 7.1 Xetro.K02150.2 X. tropicalis
JGI 7.1 Xetro.K02150.3 X. tropicalis
JGI 7.1 Xetro.K02150.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_9890007 X. tropicalis
ENSEMBL 4.1 ENSXETT00000038355 X. tropicalis
JGI 4.1 e_gw1.989.43.1 X. tropicalis
JGI 4.1 e_gw1.989.64.1 X. tropicalis
JGI 4.1 e_gw1.989.73.1 X. tropicalis
JGI 4.1 gw1.989.43.1 X. tropicalis
JGI 4.1 gw1.989.64.1 X. tropicalis
JGI 4.1 gw1.989.73.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_9890005 X. tropicalis
JGI 4.1 estExt_Genewise1.C_9890043 X. tropicalis
JGI 4.1 estExt_Genewise1.C_9890064 X. tropicalis
JGI 4.1 estExt_Genewise1.C_9890073 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_9890002 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_9890006 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_9890003 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_989000002 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_989000006 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_989000007 X. tropicalis

mRNAs from cDNA libraries (6)

Clone Accession Species Library Anatomy Stage
TGas054b12 CR761803 X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas029d10 CT485724 X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
XM_002942432 X. tropicalis
XM_031891594 X. tropicalis
XM_031891593 X. tropicalis
NM_001428236 X. tropicalis

ESTs (37)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8856117 EL818748 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8907825 EL801372 5' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
IMAGE:8867188 EL706149 5' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
st77i13 DC185876 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7594620 CX331706 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7575802 CX430709 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
CAAN11733 CX927830 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7608558 DR894760 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7717861 CX979153 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7703560 CX939778 5' X. tropicalis NIH_XGC_tropTe5 testis frog
TGas088l12 AL960283 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas029d10 AL652592 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas010j24 AL630608 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTpA055o15 BX740895 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TGas034h07 AL649239 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas054b12 AL672583 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:6986750 CF221920 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:6982412 CF151188 5' X. tropicalis NICHD_XGC_Emb8 whole organism NF stage 40 to NF stage 45
IMAGE:6982533 CF150368 5' X. tropicalis NICHD_XGC_Emb8 whole organism NF stage 40 to NF stage 45
IMAGE:8856117 EL818749 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8907825 EL801373 3' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
IMAGE:8867188 EL706148 3' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
rst111f12 DC164086 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst77i13 DC155768 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst6d01 DC144450 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst5d01 DC144147 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst21n16 DC139167 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
CAAN11733 CX927829 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7608558 DR894759 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7717861 CX979152 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7703560 CX939777 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7515673 CX746506 3' X. tropicalis NIH_XGC_tropGas6 whole organism NF stage 10 to NF stage 13
IMAGE:7575802 CX430708 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7594620 CX331705 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TGas088l12 BX752480 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas054p14 BX745739 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTpA055o15 BX740896 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40