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Summary Expression Phenotypes Gene Literature (0) GO Terms (2) Nucleotides (176) Proteins (100) Interactants (0) Wiki
XB-GENEPAGE-1009946

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for scube1 - All

RefSeq mRNAs(15)
Models - Gene (48)
Models - mRNA (73)
mRNAs (15)
ESTs (17)

RefSeq mRNAs (15)

Accession Version Protein Name Length Protein Species
XM_031898495 XM_031898495.1 XP_031754355.1 signal peptide, CUB and EGF-like domain-containing protein 1 isoform X1 4205 bp XP_031754355 X. tropicalis
XM_031898496 XM_031898496.1 XP_031754356.1 signal peptide, CUB and EGF-like domain-containing protein 1 isoform X2 4154 bp XP_031754356 X. tropicalis
XM_031898497 XM_031898497.1 XP_031754357.1 signal peptide, CUB and EGF-like domain-containing protein 1 isoform X3 4114 bp XP_031754357 X. tropicalis
XM_031898498 XM_031898498.1 XP_031754358.1 signal peptide, CUB and EGF-like domain-containing protein 1 isoform X4 4115 bp XP_031754358 X. tropicalis
XM_031898499 XM_031898499.1 XP_031754359.1 signal peptide, CUB and EGF-like domain-containing protein 1 isoform X5 4063 bp XP_031754359 X. tropicalis
XM_031898500 XM_031898500.1 XP_031754360.1 signal peptide, CUB and EGF-like domain-containing protein 1 isoform X6 4024 bp XP_031754360 X. tropicalis
XM_041587862 XM_041587862.1 XP_041443796.1 signal peptide, CUB and EGF-like domain-containing protein 1 isoform X4 4204 bp XP_041443796 X. laevis.S
XM_041587863 XM_041587863.1 XP_041443797.1 signal peptide, CUB and EGF-like domain-containing protein 1 isoform X5 4153 bp XP_041443797 X. laevis.S
XM_041587864 XM_041587864.1 XP_041443798.1 signal peptide, CUB and EGF-like domain-containing protein 1 isoform X6 4113 bp XP_041443798 X. laevis.S
XM_041585840 XM_041585840.1 XP_041441774.1 signal peptide, CUB and EGF-like domain-containing protein 1 isoform X1 5361 bp XP_041441774 X. laevis.L
XM_041585841 XM_041585841.1 XP_041441775.1 signal peptide, CUB and EGF-like domain-containing protein 1 isoform X2 5354 bp XP_041441775 X. laevis.L
XM_041585842 XM_041585842.1 XP_041441776.1 signal peptide, CUB and EGF-like domain-containing protein 1 isoform X3 5262 bp XP_041441776 X. laevis.L
XM_041587859 XM_041587859.1 XP_041443793.1 signal peptide, CUB and EGF-like domain-containing protein 1 isoform X1 4300 bp XP_041443793 X. laevis.S
XM_041587860 XM_041587860.1 XP_041443794.1 signal peptide, CUB and EGF-like domain-containing protein 1 isoform X2 4243 bp XP_041443794 X. laevis.S
XM_041587861 XM_041587861.1 XP_041443795.1 signal peptide, CUB and EGF-like domain-containing protein 1 isoform X3 4210 bp XP_041443795 X. laevis.S

Models - Gene (48)

Source Version Model Species
NCBI 10.0 XBXT10g009946 X. tropicalis
NCBI 10.1 XBXL10_1g11439 X. laevis.L
NCBI 10.1 XBXL10_1g14992 X. laevis.S
ENSEMBL 10.0 scube1 X. tropicalis
JGI 9.1 Xelaev18016687m.g X. laevis.L
JGI 9.1 Xelaev18019759m.g X. laevis.S
Xenbase 9.1 gene23712 X. tropicalis
Xenbase 9.2 gene37151 X. laevis.L
Xenbase 9.2 gene42722 X. laevis.S
ENSEMBL 9.1 scube1 X. tropicalis
JGI 7.1 Xetro.B02601 X. tropicalis
JGI 6.0 XeXenL6RMv10003980m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000012277 X. tropicalis
JGI 4.1 e_gw1.956.14.1 X. tropicalis
JGI 4.1 e_gw1.956.19.1 X. tropicalis
JGI 4.1 e_gw1.956.23.1 X. tropicalis
JGI 4.1 e_gw1.956.24.1 X. tropicalis
JGI 4.1 e_gw1.956.28.1 X. tropicalis
JGI 4.1 e_gw1.956.29.1 X. tropicalis
JGI 4.1 e_gw1.956.30.1 X. tropicalis
JGI 4.1 e_gw1.956.41.1 X. tropicalis
JGI 4.1 e_gw1.956.43.1 X. tropicalis
JGI 4.1 e_gw1.956.46.1 X. tropicalis
JGI 4.1 e_gw1.956.47.1 X. tropicalis
JGI 4.1 e_gw1.956.56.1 X. tropicalis
JGI 4.1 e_gw1.956.48.1 X. tropicalis
JGI 4.1 e_gw1.956.58.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_9560001 X. tropicalis
JGI 4.1 gw1.956.14.1 X. tropicalis
JGI 4.1 gw1.956.19.1 X. tropicalis
JGI 4.1 gw1.956.23.1 X. tropicalis
JGI 4.1 gw1.956.24.1 X. tropicalis
JGI 4.1 gw1.956.41.1 X. tropicalis
JGI 4.1 gw1.956.43.1 X. tropicalis
JGI 4.1 gw1.956.46.1 X. tropicalis
JGI 4.1 gw1.956.47.1 X. tropicalis
JGI 4.1 gw1.956.48.1 X. tropicalis
JGI 4.1 gw1.956.56.1 X. tropicalis
JGI 4.1 gw1.956.58.1 X. tropicalis
JGI 4.1 gw1.956.28.1 X. tropicalis
JGI 4.1 gw1.956.29.1 X. tropicalis
JGI 4.1 gw1.956.30.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_9560001 X. tropicalis
JGI 4.1 estExt_Genewise1.C_9560014 X. tropicalis
JGI 4.1 estExt_Genewise1.C_9560043 X. tropicalis
JGI 4.1 estExt_Genewise1.C_9560056 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_9560001 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_956000001 X. tropicalis

mRNAs based on gene models(73)

Source Version Model Species
NCBI 10.0 mRNA049173 X. tropicalis
NCBI 10.1 XBmRNA21463 X. laevis.L
NCBI 10.1 XBmRNA27903 X. laevis.S
ENSEMBL 10.0 ENSXETT00000102666 X. tropicalis
ENSEMBL 10.0 ENSXETT00000102619 X. tropicalis
ENSEMBL 10.0 ENSXETT00000075036 X. tropicalis
ENSEMBL 10.0 ENSXETT00000102267 X. tropicalis
ENSEMBL 10.0 ENSXETT00000090979 X. tropicalis
ENSEMBL 10.0 ENSXETT00000080831 X. tropicalis
ENSEMBL 10.0 ENSXETT00000072100 X. tropicalis
ENSEMBL 10.0 ENSXETT00000078511 X. tropicalis
ENSEMBL 10.0 ENSXETT00000026833 X. tropicalis
JGI 9.1 Xelaev18016687m X. laevis.L
JGI 9.1 Xelaev18019759m X. laevis.S
Xenbase 9.1 rna47435 X. tropicalis
Xenbase 9.2 rna77778 X. laevis.L
Xenbase 9.2 rna85763 X. laevis.S
ENSEMBL 9.1 ENSXETT00000102619 X. tropicalis
ENSEMBL 9.1 ENSXETT00000098947 X. tropicalis
ENSEMBL 9.1 ENSXETT00000078511 X. tropicalis
ENSEMBL 9.1 ENSXETT00000080831 X. tropicalis
ENSEMBL 9.1 ENSXETT00000026833 X. tropicalis
ENSEMBL 9.1 ENSXETT00000102666 X. tropicalis
ENSEMBL 9.1 ENSXETT00000090979 X. tropicalis
ENSEMBL 9.1 ENSXETT00000102267 X. tropicalis
ENSEMBL 9.1 ENSXETT00000072100 X. tropicalis
ENSEMBL 9.1 ENSXETT00000075036 X. tropicalis
JGI 7.1 Xetro.B02601.1 X. tropicalis
JGI 6.0 XeXenL6RMv10003980m X. laevis.L
JGI 4.1 estExt_fgenesh1_pg.C_9560001 X. tropicalis
ENSEMBL 4.1 ENSXETT00000053996 X. tropicalis
ENSEMBL 4.1 ENSXETT00000026833 X. tropicalis
ENSEMBL 4.1 ENSXETT00000026834 X. tropicalis
ENSEMBL 4.1 ENSXETT00000026838 X. tropicalis
ENSEMBL 4.1 ENSXETT00000026839 X. tropicalis
ENSEMBL 4.1 ENSXETT00000053993 X. tropicalis
ENSEMBL 4.1 ENSXETT00000053992 X. tropicalis
ENSEMBL 4.1 ENSXETT00000026841 X. tropicalis
ENSEMBL 4.1 ENSXETT00000053991 X. tropicalis
JGI 4.1 e_gw1.956.14.1 X. tropicalis
JGI 4.1 e_gw1.956.19.1 X. tropicalis
JGI 4.1 e_gw1.956.23.1 X. tropicalis
JGI 4.1 e_gw1.956.24.1 X. tropicalis
JGI 4.1 e_gw1.956.28.1 X. tropicalis
JGI 4.1 e_gw1.956.29.1 X. tropicalis
JGI 4.1 e_gw1.956.30.1 X. tropicalis
JGI 4.1 e_gw1.956.41.1 X. tropicalis
JGI 4.1 e_gw1.956.43.1 X. tropicalis
JGI 4.1 e_gw1.956.46.1 X. tropicalis
JGI 4.1 e_gw1.956.47.1 X. tropicalis
JGI 4.1 e_gw1.956.48.1 X. tropicalis
JGI 4.1 e_gw1.956.56.1 X. tropicalis
JGI 4.1 e_gw1.956.58.1 X. tropicalis
JGI 4.1 gw1.956.14.1 X. tropicalis
JGI 4.1 gw1.956.19.1 X. tropicalis
JGI 4.1 gw1.956.23.1 X. tropicalis
JGI 4.1 gw1.956.24.1 X. tropicalis
JGI 4.1 gw1.956.41.1 X. tropicalis
JGI 4.1 gw1.956.43.1 X. tropicalis
JGI 4.1 gw1.956.46.1 X. tropicalis
JGI 4.1 gw1.956.47.1 X. tropicalis
JGI 4.1 gw1.956.48.1 X. tropicalis
JGI 4.1 gw1.956.56.1 X. tropicalis
JGI 4.1 gw1.956.58.1 X. tropicalis
JGI 4.1 gw1.956.28.1 X. tropicalis
JGI 4.1 gw1.956.29.1 X. tropicalis
JGI 4.1 gw1.956.30.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_9560001 X. tropicalis
JGI 4.1 estExt_Genewise1.C_9560014 X. tropicalis
JGI 4.1 estExt_Genewise1.C_9560043 X. tropicalis
JGI 4.1 estExt_Genewise1.C_9560056 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_9560001 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_956000001 X. tropicalis

mRNAs from cDNA libraries (15)

Clone Accession Species Library Anatomy Stage
XM_031898500 X. tropicalis
XM_031898499 X. tropicalis
XM_031898498 X. tropicalis
XM_031898497 X. tropicalis
XM_031898496 X. tropicalis
XM_031898495 X. tropicalis
XM_041587864 X. laevis.S
XM_041587863 X. laevis.S
XM_041587862 X. laevis.S
XM_041587861 X. laevis.S
XM_041587860 X. laevis.S
XM_041587859 X. laevis.S
XM_041585842 X. laevis.L
XM_041585841 X. laevis.L
XM_041585840 X. laevis.L

ESTs (17)

Clone Accession 5'/3' Species Library Anatomy Stage
TNeu039k22 AL660716 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
xthr13M16 CN097712 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGE:7672407 CX880833 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7696281 CX925533 5' X. tropicalis NIH_XGC_tropTe4 testis frog
xthr13M16 CN097711 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGE:7672407 CX880832 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
XL024k10 BJ035907 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL074p19 BJ062092 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
xlk158o15ex DC063735 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk69l16ex DC057329 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk4l14ex DC054142 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL020n04 BJ033451 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL024k10 BJ050503 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL074p19 BJ080249 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
rxlk158o15ex DC030226 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxlk69l16ex DC023910 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL020n04 BJ048739 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15