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Summary Expression Phenotypes Gene Literature (0) GO Terms (9) Nucleotides (126) Proteins (50) Interactants (18) Wiki
XB-GENEPAGE-1009925

Show:     All X. tropicalis X. laevis

Nucleotide sequences for alkbh4 - All

RefSeq mRNAs(5)
Models - Gene (29)
Models - mRNA (33)
mRNAs (7)
ESTs (26)

RefSeq mRNAs (5)

Accession Version Protein Name Length Protein Species
XM_002942264 XM_002942264.5 alpha-ketoglutarate-dependent dioxygenase alkB homolog 4 isoform X1 3136 bp XP_002942310 X. tropicalis
XM_004911648 XM_004911648.4 alpha-ketoglutarate-dependent dioxygenase alkB homolog 4 isoform X2 3092 bp XP_004911705 X. tropicalis
XM_012957471 XM_012957471.3 alpha-ketoglutarate-dependent dioxygenase alkB homolog 4 isoform X3 4174 bp XP_012812925 X. tropicalis
XM_018091489 XM_018091489.2 alpha-ketoglutarate-dependent dioxygenase alkB homolog 4 isoform X4 3099 bp XP_017946978 X. tropicalis
XM_018244978 XM_018244978.2 alpha-ketoglutarate-dependent dioxygenase alkB homolog 4 3003 bp XP_018100467 X. laevis.L

Models - Gene (29)

Source Version Model Species
NCBI 10.1 XBXL10_1g6691 X. laevis.L
NCBI 10.0 XBXT10g000912 X. tropicalis
ENSEMBL 10.0 alkbh4 X. tropicalis
Xenbase 9.2 gene1786 X. laevis.L
JGI 9.1 Xelaev18011892m.g X. laevis.L
Xenbase 9.1 gene8283 X. tropicalis
ENSEMBL 9.1 cisd2 X. tropicalis
JGI 8.0 Xetrov14007005m.g X. tropicalis
JGI 7.2 Xelaev16003377m.g X. laevis.L
JGI 7.1 Xetro.B00426 X. tropicalis
JGI 6.0 XeXenL6RMv10040948m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000005474 X. tropicalis
JGI 4.1 e_gw1.949.14.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_9490002 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_949000001 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_949000004 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_949000005 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_9490004 X. tropicalis
JGI 4.1 e_gw1.949.12.1 X. tropicalis
JGI 4.1 e_gw1.949.3.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_9490003 X. tropicalis
JGI 4.1 gw1.949.12.1 X. tropicalis
JGI 4.1 gw1.949.14.1 X. tropicalis
JGI 4.1 gw1.949.3.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_9490003 X. tropicalis
JGI 4.1 estExt_Genewise1.C_9490003 X. tropicalis
JGI 4.1 estExt_Genewise1.C_9490012 X. tropicalis
JGI 4.1 estExt_Genewise1.C_9490014 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_9490001 X. tropicalis

mRNAs based on gene models(33)

Source Version Model Species
NCBI 10.1 XBmRNA12541 X. laevis.L
NCBI 10.0 mRNA004585 X. tropicalis
ENSEMBL 10.0 ENSXETT00000096089 X. tropicalis
Xenbase 9.2 rna5191 X. laevis.L
ENSEMBL 9.1 ENSXETT00000096089 X. tropicalis
JGI 9.1 Xelaev18011892m X. laevis.L
Xenbase 9.1 rna26767 X. tropicalis
JGI 8.0 Xetrov14007005m X. tropicalis
JGI 7.2 Xelaev16003377m X. laevis.L
JGI 7.1 Xetro.B00426.4 X. tropicalis
JGI 7.1 Xetro.B00426.1 X. tropicalis
JGI 7.1 Xetro.B00426.2 X. tropicalis
JGI 7.1 Xetro.B00426.3 X. tropicalis
JGI 7.1 Xetro.B00426.5 X. tropicalis
JGI 6.0 XeXenL6RMv10040948m X. laevis.L
JGI 4.1 gw1.949.12.1 X. tropicalis
JGI 4.1 gw1.949.14.1 X. tropicalis
JGI 4.1 gw1.949.3.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_949000005 X. tropicalis
JGI 4.1 e_gw1.949.14.1 X. tropicalis
JGI 4.1 e_gw1.949.3.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000012033 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_9490001 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_9490003 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_9490004 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_9490002 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_9490003 X. tropicalis
JGI 4.1 estExt_Genewise1.C_9490003 X. tropicalis
JGI 4.1 estExt_Genewise1.C_9490012 X. tropicalis
JGI 4.1 estExt_Genewise1.C_9490014 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_949000001 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_949000004 X. tropicalis
JGI 4.1 e_gw1.949.12.1 X. tropicalis

mRNAs from cDNA libraries (7)

Clone Accession Species Library Anatomy Stage
XM_002942264 X. tropicalis
XM_004911648 X. tropicalis
XM_012957471 X. tropicalis
XM_018091489 X. tropicalis
IMAGE:6642550 BC070778 X. laevis.L
NM_001091322 X. laevis.L
XM_018244978 X. laevis.L

ESTs (26)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7693399 CX920483 5' X. tropicalis NIH_XGC_tropTe4 testis frog
TGas033j02 AL648970 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7671790 CX879867 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7695433 CX924216 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7695433 CX924215 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7693399 CX920482 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7671790 CX879866 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
XL204d16 BJ623326 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
PBX0130C12 AW643575 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:3751240 BG348190 5' X. laevis.L Xenopus laevis gastrula non normalized whole organism NF stage 10.5 to NF stage 11.5
xlk148f18ex DC051211 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:5572593 BQ732372 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:8532881 EB483656 5' X. laevis.L NICHD_XGC_limb_m limb NF stage 54 to NF stage 61
IMAGE:3750619 BG038130 5' X. laevis.L Xenopus laevis gastrula non normalized whole organism NF stage 10.5 to NF stage 11.5
IMAGE:3378586 BE491384 5' X. laevis.L Wellcome CRC pSK egg egg unfertilized egg stage
IMAGE:6326962 CA974379 5' X. laevis.L Wellcome CRC pSK egg egg unfertilized egg stage
IMAGE:6632529 BU907378 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:6636898 BU910988 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGp998G1014213 BX851628 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:5156960 CA790570 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:8532881 EC275733 3' X. laevis.L NICHD_XGC_limb_m limb NF stage 54 to NF stage 61
rxlk148f18ex DC017870 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:3751240 BG023269 3' X. laevis.L Xenopus laevis gastrula non normalized whole organism NF stage 10.5 to NF stage 11.5
XL204d16 BJ639983 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:3302054 BF072101 3' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:3378586 BE491540 3' X. laevis.L Wellcome CRC pSK egg egg unfertilized egg stage