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Summary Expression Phenotypes Gene Literature (1) GO Terms (3) Nucleotides (112) Proteins (56) Interactants (67) Wiki
XB-GENEPAGE-1009681

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for atl3 - All

RefSeq mRNAs(3)
Models - Gene (26)
Models - mRNA (38)
mRNAs (9)
ESTs (21)

RefSeq mRNAs (3)

Accession Version name Length Protein Species
NM_001016595 atlastin-3 1832 bp NP_001016595 X. tropicalis
XM_018257633 atlastin-3 isoform X1 5184 bp XP_018113122 X. laevis.L
XM_018257634 atlastin-3 isoform X2 5157 bp XP_018113123 X. laevis.L

Models - Gene (26)

Source Version Model Species
NCBI 10.0 XBXT10g014948 X. tropicalis
NCBI 10.1 XBXL10_1g18224 X. laevis.L
ENSEMBL 10.0 atl3 X. tropicalis
Xenbase 9.1 gene4497 X. tropicalis
ENSEMBL 9.1 atl3 X. tropicalis
JGI 7.1 Xetro.K00898 X. tropicalis
JGI 6.0 XeXenL6RMv10027807m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000002686 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_8370002 X. tropicalis
JGI 4.1 e_gw1.837.1.1 X. tropicalis
JGI 4.1 e_gw1.837.17.1 X. tropicalis
JGI 4.1 e_gw1.837.40.1 X. tropicalis
JGI 4.1 gw1.837.1.1 X. tropicalis
JGI 4.1 gw1.837.17.1 X. tropicalis
JGI 4.1 gw1.837.40.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_8370001 X. tropicalis
JGI 4.1 estExt_Genewise1.C_8370001 X. tropicalis
JGI 4.1 estExt_Genewise1.C_8370017 X. tropicalis
JGI 4.1 estExt_Genewise1.C_8370040 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_8370001 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_8370001 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_8370001 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_837000001 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_837000001 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_837000001 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_837000002 X. tropicalis

mRNAs based on gene models(38)

Source Version Model Species
NCBI 10.0 mRNA073941 X. tropicalis
NCBI 10.1 XBmRNA33586 X. laevis.L
ENSEMBL 10.0 ENSXETT00000078236 X. tropicalis
ENSEMBL 10.0 ENSXETT00000099402 X. tropicalis
ENSEMBL 10.0 ENSXETT00000101822 X. tropicalis
ENSEMBL 10.0 ENSXETT00000005792 X. tropicalis
Xenbase 9.1 rna14641 X. tropicalis
ENSEMBL 9.1 ENSXETT00000101822 X. tropicalis
ENSEMBL 9.1 ENSXETT00000090203 X. tropicalis
ENSEMBL 9.1 ENSXETT00000099402 X. tropicalis
ENSEMBL 9.1 ENSXETT00000087048 X. tropicalis
ENSEMBL 9.1 ENSXETT00000084324 X. tropicalis
ENSEMBL 9.1 ENSXETT00000097811 X. tropicalis
ENSEMBL 9.1 ENSXETT00000005792 X. tropicalis
ENSEMBL 9.1 ENSXETT00000070402 X. tropicalis
ENSEMBL 9.1 ENSXETT00000078236 X. tropicalis
ENSEMBL 9.1 ENSXETT00000067396 X. tropicalis
JGI 7.1 Xetro.K00898.1 X. tropicalis
JGI 6.0 XeXenL6RMv10027807m X. laevis.L
JGI 4.1 estExt_fgenesh1_pg.C_8370002 X. tropicalis
ENSEMBL 4.1 ENSXETT00000005792 X. tropicalis
JGI 4.1 e_gw1.837.1.1 X. tropicalis
JGI 4.1 e_gw1.837.17.1 X. tropicalis
JGI 4.1 e_gw1.837.40.1 X. tropicalis
JGI 4.1 gw1.837.1.1 X. tropicalis
JGI 4.1 gw1.837.17.1 X. tropicalis
JGI 4.1 gw1.837.40.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_8370001 X. tropicalis
JGI 4.1 estExt_Genewise1.C_8370001 X. tropicalis
JGI 4.1 estExt_Genewise1.C_8370017 X. tropicalis
JGI 4.1 estExt_Genewise1.C_8370040 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_8370001 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_8370001 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_8370001 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_837000001 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_837000001 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_837000001 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_837000002 X. tropicalis

mRNAs from cDNA libraries (9)

Clone Accession Species Library Anatomy Stage
NM_001016595 X. tropicalis
TEgg024f16 CR760588 X. tropicalis
IMAGE:8961155 BC161727 X. tropicalis NICHD_XGC_tropInt_63 intestine unspecified stage
XM_031900090 X. tropicalis
XM_031900089 X. tropicalis
XM_031900088 X. tropicalis
XM_031900087 X. tropicalis
XM_018257634 X. laevis.L
XM_018257633 X. laevis.L

ESTs (21)

Clone Accession 5'/3' Species Library Anatomy Stage
TNeu069i07 BX683138 - X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:8888496 EL846831 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8918103 EL831814 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8928204 EL676650 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:8961155 EL662054 5' X. tropicalis NICHD_XGC_tropInt_63 intestine unspecified stage
TTbA033o15 CR431482 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TGas086l19 AL959594 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTpA023m20 BX715102 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA016l22 BX713487 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TGas006h20 AL674997 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:8888496 EL846832 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8925611 EL671585 3' X. tropicalis NICHD_XGC_tropThy1 thymus frog
CAAO4452 CX935575 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7805126 DR841346 3' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7752402 DN052802 3' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
IMAGE:7614559 CX390070 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7613814 CX389381 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7613627 CX389108 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TGas086l19 BX752726 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTpA016l22 BX713488 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:4202310 BG233484 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32