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Summary Expression Phenotypes Gene Literature (4) GO Terms (29) Nucleotides (195) Proteins (51) Interactants (405) Wiki
XB-GENEPAGE-1008122

Show:     All X. tropicalis X. laevis

Nucleotide sequences for lsm7 - All

RefSeq mRNAs(4)
Models - Gene (28)
Models - mRNA (34)
mRNAs (8)
ESTs (105)

RefSeq mRNAs (4)

Accession Version Protein Name Length Protein Species
NM_001171662 NM_001171662.1 U6 snRNA-associated Sm-like protein LSm7 551 bp NP_001165133 X. tropicalis
XM_018096377 XM_018096377.2 U6 snRNA-associated Sm-like protein LSm7 isoform X1 593 bp XP_017951866 X. tropicalis
NM_001092657 NM_001092657.1 LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated L homeolog 539 bp NP_001086126 X. laevis.L
XM_018243505 XM_018243505.2 U6 snRNA-associated Sm-like protein LSm7 662 bp XP_018098994 X. laevis.S

Models - Gene (28)

Source Version Model Species
NCBI 10.1 XBXL10_1g1416 X. laevis.L
NCBI 10.1 XBXL10_1g4283 X. laevis.S
NCBI 10.0 XBXT10g017260 X. tropicalis
ENSEMBL 10.0 lsm7 X. tropicalis
Xenbase 9.2 gene50000 X. laevis.L
JGI 9.1 Xelaev18009627m.g X. laevis.S
JGI 9.1 Xelaev18006068m.g X. laevis.L
Xenbase 9.1 gene5139 X. tropicalis
ENSEMBL 9.1 lsm7 X. tropicalis
JGI 8.0 Xetrov14003877m.g X. tropicalis
JGI 7.2 Xelaev16049199m.g X. laevis.L
JGI 7.1 Xetro.A02426 X. tropicalis
JGI 6.0 XeXenL6RMv10028009m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000022166 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_5550003 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_555000003 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_555000012 X. tropicalis
JGI 4.1 gw1.555.51.1 X. tropicalis
JGI 4.1 e_gw1.555.65.1 X. tropicalis
JGI 4.1 e_gw1.555.51.1 X. tropicalis
JGI 4.1 e_gw1.555.5.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_5550012 X. tropicalis
JGI 4.1 gw1.555.5.1 X. tropicalis
JGI 4.1 gw1.555.65.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_5550009 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5550005 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5550051 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5550065 X. tropicalis

mRNAs based on gene models(34)

Source Version Model Species
NCBI 10.1 XBmRNA7952 X. laevis.S
NCBI 10.1 XBmRNA2449 X. laevis.L
ENSEMBL 10.0 ENSXETT00000072777 X. tropicalis
NCBI 10.0 mRNA085393 X. tropicalis
ENSEMBL 10.0 ENSXETT00000116598 X. tropicalis
ENSEMBL 10.0 ENSXETT00000047968 X. tropicalis
ENSEMBL 10.0 ENSXETT00000076305 X. tropicalis
ENSEMBL 10.0 ENSXETT00000119126 X. tropicalis
Xenbase 9.2 rna96253 X. laevis.L
Xenbase 9.1 rna16724 X. tropicalis
JGI 9.1 Xelaev18006068m X. laevis.L
ENSEMBL 9.1 ENSXETT00000047968 X. tropicalis
JGI 9.1 Xelaev18009627m X. laevis.S
ENSEMBL 9.1 ENSXETT00000072777 X. tropicalis
ENSEMBL 9.1 ENSXETT00000076305 X. tropicalis
JGI 8.0 Xetrov14003877m X. tropicalis
JGI 7.2 Xelaev16049199m X. laevis.L
JGI 7.1 Xetro.A02426.1 X. tropicalis
JGI 6.0 XeXenL6RMv10028009m X. laevis.L
JGI 4.1 estExt_Genewise1.C_5550065 X. tropicalis
JGI 4.1 e_gw1.555.51.1 X. tropicalis
JGI 4.1 e_gw1.555.65.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000047968 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_5550003 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_5550012 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_5550009 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5550005 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5550051 X. tropicalis
JGI 4.1 e_gw1.555.5.1 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_555000003 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_555000012 X. tropicalis
JGI 4.1 gw1.555.5.1 X. tropicalis
JGI 4.1 gw1.555.51.1 X. tropicalis
JGI 4.1 gw1.555.65.1 X. tropicalis

mRNAs from cDNA libraries (8)

Clone Accession Species Library Anatomy Stage
IMAGE:7539296 BC155031 X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
CN098080 X. tropicalis
TGas077j20 CT025465 X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
NM_001171662 X. tropicalis
XM_018096377 X. tropicalis
IMAGE:7009067 BC074231 X. laevis.L
NM_001092657 X. laevis.L
XM_018243505 X. laevis.S

ESTs (105)

100 ESTs displayed. View all

Clone Accession 5'/3' Species Library Anatomy Stage
xthr01N24 CN119597 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr39E12 CN112825 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
THdA006f21 CR576029 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
xthr25F15 CN104259 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TTpA076c07 BX734143 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
xthr21N21 CN103756 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TTpA039c06 BX740550 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
xthr21O22 CN103606 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGE:7607133 CX367406 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
CN102228 CN102228 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGE:7622917 CX371694 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
xthr18I09 CN100675 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xtbs09L10 CN094524 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xthr14C23 CN098080 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TNeu029g21 AL646565 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
CN094974 CN094974 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xtbs26L19 CN086077 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
TGas077j20 AL775407 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas093j20 AL962344 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTbA039m09 CR441573 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TNeu085k23 AL787121 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7529939 CX426734 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7539296 CX451867 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
xtbs05H08 CN074885 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
TNeu097i16 AL790059 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
xtbs18E06 CN080645 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
TNeu098j14 AL791633 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
xtbs25I16 CN085284 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
TTpA012i24 BX706335 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:9016330 EL863341 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:7539296 CX451866 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7564351 CX474760 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7556757 CX504896 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
THdA013a19 CR563313 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
xtbs09L10 CN094523 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
TTpA012i24 BX706336 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7607133 DR894298 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TNeu097i16 BX692970 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:9016330 EL863342 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
xtbs05H08 CN074884 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs18E06 CN080644 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs25I16 CN085283 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs26L19 CN086076 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xthr39E12 CN112824 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr25F15 CN104258 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr21N21 CN103755 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr21O22 CN103605 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
CN102227 CN102227 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr18I09 CN100674 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr14C23 CN098079 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
CN094973 CN094973 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGE:7512178 CX740723 3' X. tropicalis NIH_XGC_tropGas5 whole organism NF stage 10 to NF stage 18
IMAGE:7529939 CX426733 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
xlk1n18ex DC053235 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:8642131 EB737266 5' X. laevis.L NICHD_XGC_skin_m skin unspecified stage
PBX0078B02 AW639064 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
PBX0097F04 AW640668 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:3402795 BG363947 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
XL041h23 BJ037763 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL154l02 BJ096659 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL401k06ex BP675691 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL424i05ex BP676987 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL432k12ex BP679700 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL445e06ex BP684203 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL448l16ex BP685299 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL404g01ex BP685787 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL451c07ex BP686398 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
xlk120o18ex DC042283 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk133m20ex DC046474 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk135a07ex DC046859 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk139d06ex DC048222 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk144h20ex DC049954 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
za49a01 AW158903 5' X. laevis.L Xenopus EST library brain NF stage 45 to NF stage 66
xlk70k24ex DC057958 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk77f20ex DC060110 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk7e20ex DC061053 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:4201817 BG234749 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:4959390 BM179921 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:5542451 BQ737479 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGp998I189547 BX850802 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:6940056 CB983522 5' X. laevis.L NICHD_XGC_Tad1 whole organism NF stage 54 to prometamorphosis stage
IMAGE:8734979 EE310064 5' X. laevis.L NICHD_XGC_panc pancreas frog
IMAGE:8544543 EB468673 5' X. laevis.L NICHD_XGC_tail_m tail NF stage 56 to NF stage 62
IMAGE:4959390 BM179028 3' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:4201817 BG023694 3' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
rxlk77f20ex DC026651 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxlk70k24ex DC024539 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxlk1n18ex DC019866 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxlk144h20ex DC016641 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxlk139d06ex DC014973 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxlk135a07ex DC013662 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxlk133m20ex DC013280 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxlk120o18ex DC009249 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL455l09ex BP723236 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL451c07ex BP722169 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL404g01ex BP721666 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL448l16ex BP721177 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL445e06ex BP720167 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL432n01ex BP716579 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5