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Summary Expression Phenotypes Gene Literature (4) GO Terms (6) Nucleotides (195) Proteins (51) Interactants (405) Wiki
XB-GENEPAGE-1008122

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for lsm7 - Xenopus tropicalis

RefSeq mRNAs(1)
Models - Gene (21)
Models - mRNA (27)
mRNAs (5)
ESTs (53)

RefSeq mRNAs (1)

Accession Version name Length Protein Species
NM_001171662 NM_001171662.1 U6 snRNA-associated Sm-like protein LSm7 551 bp NP_001165133 X. tropicalis

Models - Gene (21)

Source Version Model Species
NCBI 10.0 XBXT10g017260 X. tropicalis
ENSEMBL 10.0 lsm7 X. tropicalis
Xenbase 9.1 gene5139 X. tropicalis
ENSEMBL 9.1 lsm7 X. tropicalis
JGI 8.0 Xetrov14003877m.g X. tropicalis
JGI 7.1 Xetro.A02426 X. tropicalis
ENSEMBL 4.1 ENSXETG00000022166 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_5550012 X. tropicalis
JGI 4.1 e_gw1.555.5.1 X. tropicalis
JGI 4.1 e_gw1.555.51.1 X. tropicalis
JGI 4.1 e_gw1.555.65.1 X. tropicalis
JGI 4.1 gw1.555.5.1 X. tropicalis
JGI 4.1 gw1.555.51.1 X. tropicalis
JGI 4.1 gw1.555.65.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_5550009 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5550005 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5550051 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5550065 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_5550003 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_555000003 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_555000012 X. tropicalis

mRNAs based on gene models(27)

Source Version Model Species
NCBI 10.0 mRNA085393 X. tropicalis
ENSEMBL 10.0 ENSXETT00000119126 X. tropicalis
ENSEMBL 10.0 ENSXETT00000072777 X. tropicalis
ENSEMBL 10.0 ENSXETT00000116598 X. tropicalis
ENSEMBL 10.0 ENSXETT00000076305 X. tropicalis
ENSEMBL 10.0 ENSXETT00000047968 X. tropicalis
Xenbase 9.1 rna16724 X. tropicalis
ENSEMBL 9.1 ENSXETT00000072777 X. tropicalis
ENSEMBL 9.1 ENSXETT00000047968 X. tropicalis
ENSEMBL 9.1 ENSXETT00000076305 X. tropicalis
JGI 8.0 Xetrov14003877m X. tropicalis
JGI 7.1 Xetro.A02426.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_5550012 X. tropicalis
ENSEMBL 4.1 ENSXETT00000047968 X. tropicalis
JGI 4.1 e_gw1.555.5.1 X. tropicalis
JGI 4.1 e_gw1.555.51.1 X. tropicalis
JGI 4.1 e_gw1.555.65.1 X. tropicalis
JGI 4.1 gw1.555.5.1 X. tropicalis
JGI 4.1 gw1.555.51.1 X. tropicalis
JGI 4.1 gw1.555.65.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_5550009 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5550005 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5550051 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5550065 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_5550003 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_555000003 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_555000012 X. tropicalis

mRNAs from cDNA libraries (5)

Clone Accession Species Library Anatomy Stage
TGas077j20 CT025465 X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7539296 BC155031 X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
NM_001171662 X. tropicalis
XM_018096377 X. tropicalis
CN098080 X. tropicalis

ESTs (53)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:9016330 EL863341 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
xtbs09L10 CN094524 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs26L19 CN086077 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs25I16 CN085284 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs18E06 CN080645 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs05H08 CN074885 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7622917 CX371694 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7607133 CX367406 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7539296 CX451867 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7529939 CX426734 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
THdA006f21 CR576029 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTbA039m09 CR441573 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
xthr01N24 CN119597 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr39E12 CN112825 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr25F15 CN104259 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr21N21 CN103756 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr21O22 CN103606 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
CN102228 CN102228 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr18I09 CN100675 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr14C23 CN098080 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
CN094974 CN094974 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TGas093j20 AL962344 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas077j20 AL775407 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTpA039c06 BX740550 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA076c07 BX734143 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA012i24 BX706335 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TNeu098j14 AL791633 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu097i16 AL790059 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu085k23 AL787121 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu029g21 AL646565 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:9016330 EL863342 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
xtbs09L10 CN094523 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs26L19 CN086076 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs25I16 CN085283 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs18E06 CN080644 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs05H08 CN074884 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7539296 CX451866 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7607133 DR894298 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7512178 CX740723 3' X. tropicalis NIH_XGC_tropGas5 whole organism NF stage 10 to NF stage 18
IMAGE:7556757 CX504896 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7564351 CX474760 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7529939 CX426733 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
THdA013a19 CR563313 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
xthr39E12 CN112824 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr25F15 CN104258 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr21N21 CN103755 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr21O22 CN103605 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
CN102227 CN102227 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr18I09 CN100674 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr14C23 CN098079 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
CN094973 CN094973 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TTpA012i24 BX706336 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TNeu097i16 BX692970 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21