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Summary Expression Phenotypes Gene Literature (3) GO Terms (23) Nucleotides (152) Proteins (48) Interactants (190) Wiki
XB-GENEPAGE-1007895

Show:     All X. tropicalis X. laevis

Nucleotide sequences for rdh16 - All

RefSeq mRNAs(4)
Models - Gene (30)
Models - mRNA (32)
mRNAs (10)
ESTs (45)

RefSeq mRNAs (4)

Accession Version Protein Name Length Protein Species
NM_001113887 NM_001113887.1 retinol dehydrogenase 16 gene 1 1992 bp NP_001107359 X. tropicalis
XM_012956390 XM_012956390.3 retinol dehydrogenase 16 isoform X1 1891 bp XP_012811844 X. tropicalis
NM_001089887 NM_001089887.2 retinol dehydrogenase 16 gene 1 L homeolog 1205 bp NP_001083356 X. laevis.L
XM_041580920 XM_041580920.1 XP_041436854.1 retinol dehydrogenase 16 L homeolog isoform X1 2476 bp XP_041436854 X. laevis.L

Models - Gene (30)

Source Version Model Species
NCBI 10.1 XBXL10_1g8096 X. laevis.L
NCBI 10.0 XBXT10g010260 X. tropicalis
ENSEMBL 10.0 rdh16 X. tropicalis
Xenbase 9.2 gene18129 X. laevis.L
JGI 9.1 Xelaev18013407m.g X. laevis.L
Xenbase 9.1 gene1891 X. tropicalis
JGI 8.0 Xetrov14010077m.g X. tropicalis
JGI 7.2 Xelaev16014290m.g X. laevis.L
JGI 7.1 Xetro.B01360 X. tropicalis
JGI 6.0 XeXenL6RMv10009668m.g X. laevis.L
JGI 6.0 XeXenL6RMv10009670m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000025416 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5220054 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_5220005 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_5220009 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_5220003 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_522000005 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_522000009 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_522000010 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_522000003 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5220052 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5220051 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_5220007 X. tropicalis
JGI 4.1 gw1.522.54.1 X. tropicalis
JGI 4.1 gw1.522.52.1 X. tropicalis
JGI 4.1 gw1.522.51.1 X. tropicalis
JGI 4.1 e_gw1.522.54.1 X. tropicalis
JGI 4.1 e_gw1.522.52.1 X. tropicalis
JGI 4.1 e_gw1.522.51.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_5220010 X. tropicalis

mRNAs based on gene models(32)

Source Version Model Species
NCBI 10.1 XBmRNA15316 X. laevis.L
ENSEMBL 10.0 ENSXETT00000076954 X. tropicalis
NCBI 10.0 mRNA050736 X. tropicalis
ENSEMBL 10.0 ENSXETT00000009609 X. tropicalis
Xenbase 9.2 rna52980 X. laevis.L
Xenbase 9.1 rna6181 X. tropicalis
JGI 9.1 Xelaev18013407m X. laevis.L
JGI 8.0 Xetrov14010077m X. tropicalis
JGI 7.2 Xelaev16014290m X. laevis.L
JGI 7.1 Xetro.B01360.2 X. tropicalis
JGI 7.1 Xetro.B01360.1 X. tropicalis
JGI 6.0 XeXenL6RMv10009668m X. laevis.L
JGI 6.0 XeXenL6RMv10009670m X. laevis.L
JGI 4.1 fgenesh1_pg.C_scaffold_522000009 X. tropicalis
JGI 4.1 e_gw1.522.51.1 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_522000003 X. tropicalis
JGI 4.1 gw1.522.51.1 X. tropicalis
JGI 4.1 gw1.522.52.1 X. tropicalis
JGI 4.1 gw1.522.54.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_522000010 X. tropicalis
JGI 4.1 e_gw1.522.52.1 X. tropicalis
JGI 4.1 e_gw1.522.54.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000009609 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_5220005 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_5220009 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_5220010 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_5220003 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_5220007 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5220051 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5220052 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5220054 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_522000005 X. tropicalis

mRNAs from cDNA libraries (10)

Clone Accession Species Library Anatomy Stage
IMAGE:7718512 BC157206 X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7718593 BC160521 X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:8936904 BC161248 X. tropicalis NICHD_XGC_tropBone1 bone tissue frog
IMAGE:9040302 BC171042 X. tropicalis
IMAGE:9040304 BC171044 X. tropicalis
NM_001113887 X. tropicalis
XM_012956390 X. tropicalis
IMAGE:4633471 BC060497 X. laevis.L
NM_001089887 X. laevis.L
XM_041580920 X. laevis.L

ESTs (45)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7715371 CX975034 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7464033 CV811836 5' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
TTbA018p05 CR418133 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7717278 CX978723 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7648427 CX807865 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7718593 CX980633 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7565995 CX482789 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7718512 CX981074 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7672204 CX881091 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7747439 DN042783 5' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
IMAGE:7748873 DN045392 5' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
IMAGE:7519963 CX479850 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7749218 DN046443 5' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
IMAGE:7674191 CX884234 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7603440 CX394826 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7753564 DN054522 5' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
IMAGE:7755071 DN056927 5' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
IMAGE:7712037 CX968934 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7802398 DR836707 5' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7551782 CX493910 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:8936904 EL639312 5' X. tropicalis NICHD_XGC_tropBone1 bone tissue frog
IMAGE:7802398 DR836706 3' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:8936904 EL639311 3' X. tropicalis NICHD_XGC_tropBone1 bone tissue frog
IMAGE:7748770 DN045655 3' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
rst91i02 DC159230 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7519963 CX479849 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7565995 CX482788 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7551782 CX493909 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
THdA034l24 CR588627 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7603440 CX394825 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7447707 CV804414 3' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
IMAGE:7648427 CX807864 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7672204 CX881090 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7674191 CX884233 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7712037 CX968933 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7715371 CX975033 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7715330 CX975432 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7717278 CX978722 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7718593 CX980632 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7718512 CX981073 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7747439 DN042782 3' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
rst45c15 DC147638 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7750932 DN050590 3' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
IMAGE:7753138 DN053905 3' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
IMAGE:6935373 CB942827 5' X. laevis.L NICHD_XGC_Tad2 whole organism NF stage 62