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Summary Expression Phenotypes Gene Literature (0) GO Terms (12) Nucleotides (112) Proteins (52) Interactants (19) Wiki
XB-GENEPAGE-1007412

Show:     All X. tropicalis X. laevis

Nucleotide sequences for jmjd4 - All

RefSeq mRNAs(5)
Models - Gene (24)
Models - mRNA (36)
mRNAs (7)
ESTs (19)

RefSeq mRNAs (5)

Accession Version Protein Name Length Protein Species
XM_004915526 XM_004915526.4 2-oxoglutarate and iron-dependent oxygenase JMJD4 2575 bp XP_004915583 X. tropicalis
XM_031903788 XM_031903788.1 XP_031759648.1 2-oxoglutarate and iron-dependent oxygenase JMJD4 2536 bp XP_031759648 X. tropicalis
XM_018266159 XM_018266159.2 2-oxoglutarate and iron-dependent oxygenase JMJD4 isoform X1 2582 bp XP_018121648 X. laevis.L
XM_018266160 XM_018266160.2 2-oxoglutarate and iron-dependent oxygenase JMJD4 isoform X2 2651 bp XP_018121649 X. laevis.L
XM_018266161 XM_018266161.2 2-oxoglutarate and iron-dependent oxygenase JMJD4 isoform X3 3209 bp XP_018121650 X. laevis.L

Models - Gene (24)

Source Version Model Species
NCBI 10.1 XBXL10_1g26717 X. laevis.L
NCBI 10.0 XBXT10g005140 X. tropicalis
ENSEMBL 10.0 jmjd4 X. tropicalis
Xenbase 9.2 gene3326 X. laevis.L
JGI 9.1 Xelaev18030569m.g X. laevis.L
Xenbase 9.1 gene27766 X. tropicalis
ENSEMBL 9.1 jmjd4 X. tropicalis
JGI 8.0 Xetrov14028004m.g X. tropicalis
JGI 7.2 Xelaev16078169m.g X. laevis.L
JGI 7.1 Xetro.F01771 X. tropicalis
JGI 6.0 XeXenL6RMv10011924m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000003687 X. tropicalis
JGI 4.1 gw1.479.33.1 X. tropicalis
JGI 4.1 gw1.479.3.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_4790013 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4790003 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4790032 X. tropicalis
JGI 4.1 gw1.479.32.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_479000018 X. tropicalis
JGI 4.1 e_gw1.479.33.1 X. tropicalis
JGI 4.1 e_gw1.479.32.1 X. tropicalis
JGI 4.1 e_gw1.479.3.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_4790018 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4790033 X. tropicalis

mRNAs based on gene models(36)

Source Version Model Species
NCBI 10.1 XBmRNA49941 X. laevis.L
ENSEMBL 10.0 ENSXETT00000111610 X. tropicalis
ENSEMBL 10.0 ENSXETT00000114643 X. tropicalis
ENSEMBL 10.0 ENSXETT00000119421 X. tropicalis
ENSEMBL 10.0 ENSXETT00000108430 X. tropicalis
NCBI 10.0 mRNA025476 X. tropicalis
ENSEMBL 10.0 ENSXETT00000105965 X. tropicalis
ENSEMBL 10.0 ENSXETT00000082172 X. tropicalis
ENSEMBL 10.0 ENSXETT00000078813 X. tropicalis
ENSEMBL 10.0 ENSXETT00000107334 X. tropicalis
ENSEMBL 10.0 ENSXETT00000121301 X. tropicalis
ENSEMBL 10.0 ENSXETT00000007956 X. tropicalis
Xenbase 9.2 rna9649 X. laevis.L
ENSEMBL 9.1 ENSXETT00000078813 X. tropicalis
ENSEMBL 9.1 ENSXETT00000082172 X. tropicalis
Xenbase 9.1 rna53969 X. tropicalis
JGI 9.1 Xelaev18030569m X. laevis.L
ENSEMBL 9.1 ENSXETT00000007956 X. tropicalis
JGI 8.0 Xetrov14028004m X. tropicalis
JGI 7.2 Xelaev16078169m X. laevis.L
JGI 7.1 Xetro.F01771.1 X. tropicalis
JGI 6.0 XeXenL6RMv10011924m X. laevis.L
JGI 4.1 estExt_fgenesh1_pg.C_4790018 X. tropicalis
JGI 4.1 e_gw1.479.32.1 X. tropicalis
JGI 4.1 e_gw1.479.33.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000007956 X. tropicalis
ENSEMBL 4.1 ENSXETT00000007957 X. tropicalis
JGI 4.1 e_gw1.479.3.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_4790013 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4790003 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4790032 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4790033 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_479000018 X. tropicalis
JGI 4.1 gw1.479.3.1 X. tropicalis
JGI 4.1 gw1.479.32.1 X. tropicalis
JGI 4.1 gw1.479.33.1 X. tropicalis

mRNAs from cDNA libraries (7)

Clone Accession Species Library Anatomy Stage
XM_004915526 X. tropicalis
XM_031903788 X. tropicalis
IMAGE:5079669 BC157500 X. laevis.L
NM_001114815 X. laevis.L
XM_018266159 X. laevis.L
XM_018266160 X. laevis.L
XM_018266161 X. laevis.L

ESTs (19)

Clone Accession 5'/3' Species Library Anatomy Stage
CABC4550 DR833468 5' X. tropicalis NIH_XGC_tropFat1 fat body frog
st105b14 DC191767 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7694246 CX922147 5' X. tropicalis NIH_XGC_tropTe4 testis frog
TGas104k15 AL958688 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
CAAO4625 CX935890 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7737413 DN024551 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
TGas144e17 AL963513 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:8921500 EL835639 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8957367 EL656232 5' X. tropicalis NICHD_XGC_tropInt_63 intestine unspecified stage
IMAGE:8921500 EL835640 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
rst105b14 DC161791 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
TGas104k15 BX754767 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas144e17 BX761621 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7694246 CX922146 3' X. tropicalis NIH_XGC_tropTe4 testis frog
CAAO4625 CX935889 3' X. tropicalis NIH_XGC_tropTe5 testis frog
CABC4550 DR833467 3' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGp998P048088 BX850286 5' X. laevis.L Soares NXEG egg unfertilized egg stage
XL443i12ex BP719689 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGE:3302259 BF072246 3' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage