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Summary Expression Phenotypes Gene Literature (0) GO Terms (13) Nucleotides (154) Proteins (54) Interactants (1) Wiki
XB-GENEPAGE-1007152

Show:     All X. tropicalis X. laevis

Nucleotide sequences for zcchc4 - All

RefSeq mRNAs(4)
Models - Gene (30)
Models - mRNA (37)
mRNAs (6)
ESTs (46)

RefSeq mRNAs (4)

Accession Version Protein Name Length Protein Species
NM_001008133 NM_001008133.1 rRNA N6-adenosine-methyltransferase ZCCHC4 1943 bp NP_001008134 X. tropicalis
XM_012954603 XM_012954603.3 rRNA N6-adenosine-methyltransferase ZCCHC4 isoform X1 1895 bp XP_012810057 X. tropicalis
XM_018089589 XM_018089589.2 rRNA N6-adenosine-methyltransferase ZCCHC4 isoform X1 1895 bp XP_017945078 X. tropicalis
NM_001093698 NM_001093698.1 rRNA N6-adenosine-methyltransferase ZCCHC4 1995 bp NP_001087167 X. laevis.S

Models - Gene (30)

Source Version Model Species
NCBI 10.1 XBXL10_1g3735 X. laevis.S
NCBI 10.0 XBXT10g005739 X. tropicalis
ENSEMBL 10.0 zcchc4 X. tropicalis
Xenbase 9.2 gene20193 X. laevis.S
JGI 9.1 Xelaev18008972m.g X. laevis.S
Xenbase 9.1 gene3478 X. tropicalis
ENSEMBL 9.1 zcchc4 X. tropicalis
JGI 8.0 Xetrov14048807m.g X. tropicalis
JGI 7.2 Xelaev16056823m.g X. laevis.S
JGI 7.1 Xetro.K02596 X. tropicalis
JGI 6.0 XeXenL6RMv10049461m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000000960 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4450046 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_4450005 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_4450016 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_4450005 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_445000005 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_445000015 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_445000016 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_445000005 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4450038 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4450037 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_4450010 X. tropicalis
JGI 4.1 gw1.445.49.1 X. tropicalis
JGI 4.1 gw1.445.40.1 X. tropicalis
JGI 4.1 gw1.445.39.1 X. tropicalis
JGI 4.1 e_gw1.445.49.1 X. tropicalis
JGI 4.1 e_gw1.445.40.1 X. tropicalis
JGI 4.1 e_gw1.445.39.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_4450015 X. tropicalis

mRNAs based on gene models(37)

Source Version Model Species
NCBI 10.1 XBmRNA6799 X. laevis.S
ENSEMBL 10.0 ENSXETT00000063453 X. tropicalis
ENSEMBL 10.0 ENSXETT00000002081 X. tropicalis
NCBI 10.0 mRNA028427 X. tropicalis
ENSEMBL 10.0 ENSXETT00000073051 X. tropicalis
Xenbase 9.2 rna58938 X. laevis.S
ENSEMBL 9.1 ENSXETT00000102450 X. tropicalis
ENSEMBL 9.1 ENSXETT00000002081 X. tropicalis
ENSEMBL 9.1 ENSXETT00000063453 X. tropicalis
ENSEMBL 9.1 ENSXETT00000073051 X. tropicalis
ENSEMBL 9.1 ENSXETT00000082930 X. tropicalis
Xenbase 9.1 rna11425 X. tropicalis
JGI 9.1 Xelaev18008972m X. laevis.S
JGI 8.0 Xetrov14048807m X. tropicalis
JGI 7.2 Xelaev16056823m X. laevis.S
JGI 7.1 Xetro.K02596.2 X. tropicalis
JGI 7.1 Xetro.K02596.1 X. tropicalis
JGI 6.0 XeXenL6RMv10049461m X. laevis.S
JGI 4.1 gw1.445.49.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4450038 X. tropicalis
JGI 4.1 e_gw1.445.40.1 X. tropicalis
JGI 4.1 e_gw1.445.49.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000002081 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_4450005 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_4450015 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_4450016 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_4450005 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_4450010 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4450037 X. tropicalis
JGI 4.1 e_gw1.445.39.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4450046 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_445000005 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_445000015 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_445000016 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_445000005 X. tropicalis
JGI 4.1 gw1.445.39.1 X. tropicalis
JGI 4.1 gw1.445.40.1 X. tropicalis

mRNAs from cDNA libraries (6)

Clone Accession Species Library Anatomy Stage
IMAGE:6994507 BC081342 X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
NM_001008133 X. tropicalis
XM_012954603 X. tropicalis
XM_018089589 X. tropicalis
IMAGE:5083869 BC078110 X. laevis.S
NM_001093698 X. laevis.S

ESTs (46)

Clone Accession 5'/3' Species Library Anatomy Stage
TTbA002a12 CR448084 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7788427 CX333433 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:5380407 BQ524736 5' X. tropicalis NICHD_XGC_Emb8 whole organism NF stage 40 to NF stage 45
IMAGE:7657477 CX829075 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7667701 CX854522 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7720843 CX995378 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
TNeu006n24 AL635230 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:6994507 CF237435 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
TGas137a05 AL973021 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:8954199 EL662508 5' X. tropicalis NICHD_XGC_tropInt_62 intestine frog
IMAGE:7806077 DR842328 5' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7519260 CX479030 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7586092 CX319132 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7586092 CX319131 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTbA002a12 CR448085 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7788427 CX333432 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TNeu106f02 BX690296 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:5380407 BQ524735 3' X. tropicalis NICHD_XGC_Emb8 whole organism NF stage 40 to NF stage 45
IMAGE:7806077 DR842327 3' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7657477 CX829074 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:8856211 EL818739 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:7092317 CN325998 3' X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
IMAGE:7720843 CX995377 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7519260 CX479029 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
XL072c10 BJ061159 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:8538052 EB476568 5' X. laevis.S NICHD_XGC_olfb brain unspecified stage
PBX0077D08 AW639003 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
PBX0096E09 AW640567 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
PBX0098F02 AW640757 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:3744387 BF426234 5' X. laevis.S Xenopus laevis unfertilized egg cDNA library egg unfertilized egg stage
IMAGE:6324642 CA972747 5' X. laevis.S Wellcome CRC pSK egg egg unfertilized egg stage
IMAGE:6326347 CA973923 5' X. laevis.S Wellcome CRC pSK egg egg unfertilized egg stage
IMAGE:6868920 CA982503 5' X. laevis.S Wellcome CRC pSK egg egg unfertilized egg stage
IMAGE:6635815 BU910057 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:7982311 DR725590 5' X. laevis.S NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
xl276o04 DC116680 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
IMAGE:3437119 BF614383 5' X. laevis.S Wellcome CRC pRN3 oocyte oocyte unspecified stage
IMAGE:8542747 EB462078 5' X. laevis.S NICHD_XGC_tail_m tail NF stage 56 to NF stage 62
IMAGE:8531318 EB468451 5' X. laevis.S NICHD_XGC_int_m whole organism NF stage 56 to NF stage 62
IMAGE:3744387 BG161844 3' X. laevis.S Xenopus laevis unfertilized egg cDNA library egg unfertilized egg stage
IMAGE:8542747 EE297277 3' X. laevis.S NICHD_XGC_tail_m tail NF stage 56 to NF stage 62
XL072c10 BJ079354 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:8542747 EE297276 3' X. laevis.S NICHD_XGC_tail_m tail NF stage 56 to NF stage 62
rxl293o24 DC086588 3' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl276o04 DC081715 3' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl261n24 DC077557 3' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15