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Summary Expression Phenotypes Gene Literature (3) GO Terms (28) Nucleotides (209) Proteins (55) Interactants (442) Wiki
XB-GENEPAGE-1007007

Show:     All X. tropicalis X. laevis

Nucleotide sequences for lsm6 - All

RefSeq mRNAs(6)
Models - Gene (30)
Models - mRNA (35)
mRNAs (11)
ESTs (107)

RefSeq mRNAs (6)

Accession Version Protein Name Length Protein Species
NM_001171597 NM_001171597.1 U6 snRNA-associated Sm-like protein LSm6 592 bp NP_001165068 X. tropicalis
XM_012965009 XM_012965009.3 U6 snRNA-associated Sm-like protein LSm6 isoform X1 812 bp XP_012820463 X. tropicalis
XM_012965014 XM_012965014.3 U6 snRNA-associated Sm-like protein LSm6 isoform X1 677 bp XP_012820468 X. tropicalis
NM_001093849 NM_001093849.1 Sm protein F 654 bp NP_001087318 X. laevis.S
XM_041579555 XM_041579555.1 XP_041435489.1 sm protein F 631 bp XP_041435489 X. laevis.S
XM_018231526 XM_018231526.2 U6 snRNA-associated Sm-like protein LSm6 668 bp XP_018087015 X. laevis.L

Models - Gene (30)

Source Version Model Species
NCBI 10.1 XBXL10_1g1012 X. laevis.L
NCBI 10.1 XBXL10_1g3949 X. laevis.S
NCBI 10.0 XBXT10g015461 X. tropicalis
ENSEMBL 10.0 lsm6 X. tropicalis
Xenbase 9.2 gene15944 X. laevis.S
Xenbase 9.2 gene2562 X. laevis.L
JGI 9.1 Xelaev18009250m.g X. laevis.S
JGI 9.1 Xelaev18005517m.g X. laevis.L
Xenbase 9.1 gene1413 X. tropicalis
ENSEMBL 9.1 lsm6 X. tropicalis
JGI 8.0 Xetrov14004620m.g X. tropicalis
JGI 7.2 Xelaev16081079m.g X. laevis.S
JGI 7.1 Xetro.A02828 X. tropicalis
JGI 6.0 XeXenL6RMv10041495m.g X. laevis.S
JGI 6.0 XeXenL6RMv10038568m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000023683 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_424000005 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_424000021 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_4240005 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4240067 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4240039 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4240038 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_4240009 X. tropicalis
JGI 4.1 gw1.424.68.1 X. tropicalis
JGI 4.1 gw1.424.40.1 X. tropicalis
JGI 4.1 gw1.424.39.1 X. tropicalis
JGI 4.1 e_gw1.424.68.1 X. tropicalis
JGI 4.1 e_gw1.424.40.1 X. tropicalis
JGI 4.1 e_gw1.424.39.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_4240021 X. tropicalis

mRNAs based on gene models(35)

Source Version Model Species
NCBI 10.1 XBmRNA7219 X. laevis.S
NCBI 10.1 XBmRNA1571 X. laevis.L
ENSEMBL 10.0 ENSXETT00000084211 X. tropicalis
ENSEMBL 10.0 ENSXETT00000051104 X. tropicalis
NCBI 10.0 mRNA076484 X. tropicalis
Xenbase 9.2 rna7449 X. laevis.L
Xenbase 9.2 rna46615 X. laevis.S
Xenbase 9.1 rna4563 X. tropicalis
JGI 9.1 Xelaev18009250m X. laevis.S
JGI 9.1 Xelaev18005517m X. laevis.L
ENSEMBL 9.1 ENSXETT00000084211 X. tropicalis
ENSEMBL 9.1 ENSXETT00000051104 X. tropicalis
JGI 8.0 Xetrov14004620m X. tropicalis
JGI 7.2 Xelaev16081079m X. laevis.S
JGI 7.1 Xetro.A02828.1 X. tropicalis
JGI 7.1 Xetro.A02828.2 X. tropicalis
JGI 7.1 Xetro.A02828.4 X. tropicalis
JGI 7.1 Xetro.A02828.3 X. tropicalis
JGI 6.0 XeXenL6RMv10038568m X. laevis.S
JGI 6.0 XeXenL6RMv10041495m X. laevis.S
JGI 4.1 gw1.424.40.1 X. tropicalis
JGI 4.1 e_gw1.424.40.1 X. tropicalis
JGI 4.1 e_gw1.424.68.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000051104 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_4240021 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_4240005 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_4240009 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4240038 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4240039 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4240067 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_424000021 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_424000005 X. tropicalis
JGI 4.1 gw1.424.39.1 X. tropicalis
JGI 4.1 e_gw1.424.39.1 X. tropicalis
JGI 4.1 gw1.424.68.1 X. tropicalis

mRNAs from cDNA libraries (11)

Clone Accession Species Library Anatomy Stage
IMAGE:7826818 BC118889 X. tropicalis
IMAGE:7545603 BC157144 X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas070i08 CT025429 X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
NM_001171597 X. tropicalis
XM_012965009 X. tropicalis
XM_012965014 X. tropicalis
IMAGE:8332195 BC128975 X. laevis.S
NM_001093849 X. laevis.S
XM_041579555 X. laevis.S
IMAGE:6933188 BC078551 X. laevis.L NICHD_XGC_Tad2 whole organism NF stage 62
XM_018231526 X. laevis.L

ESTs (107)

100 ESTs displayed. View all

Clone Accession 5'/3' Species Library Anatomy Stage
L1G11c05 AL639013 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu035f15 AL657108 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu042i20 AL662611 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu091k13 AL778056 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu093i19 AL778905 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu089a23 AL781418 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu107o02 AL790543 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu128h19 AL798119 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu143b13 AL799070 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu100c21 AL805690 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7516184 CX747237 5' X. tropicalis NIH_XGC_tropNeu5 whole organism NF stage 14 to NF stage 18
TGas004b10 AL594117 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas001c05 AL594558 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas025n23 AL627790 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas031m09 AL647055 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas036f16 AL651727 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas070i08 AL680762 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas066g08 AL682482 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas136l02 AL972758 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7528391 CX425131 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7532071 CX432777 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7572671 CX435296 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7524786 CX439921 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7574831 CX441756 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7522101 CX471117 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7545603 CX488062 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TTbA067k06 CR423068 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA060c02 CR424285 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA051k05 CR432337 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7785845 CX316731 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7593088 CX326950 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7616125 CX392492 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7605477 DR893911 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7652226 CX814995 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
xtbs02E06 CN072738 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs11B17 CN076189 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs13I17 CN077264 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs13I23 CN077270 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs29O15 CN087836 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xthr25I19 CN104037 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr35G13 CN110258 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGE:8887599 EL845364 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:9010242 EL854446 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
xtbs13I17 CN077263 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xthr25I19 CN104036 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TTbA060c02 CR424286 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:8887599 EL845365 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:7574831 CX441755 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
xtbs29O15 CN087835 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7572671 CX435295 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7593088 DR890575 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7532071 CX432776 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7605477 CX412828 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
xtbs11B17 CN076188 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
TNeu089a23 BX693688 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu093i19 BX695755 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu091k13 BX695926 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu098i11 BX699191 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7516184 CX747236 3' X. tropicalis NIH_XGC_tropNeu5 whole organism NF stage 14 to NF stage 18
TTbA067k06 CR423069 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TGas136l02 BX759804 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas066g08 BX746734 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7616125 CX392491 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
xtbs13I23 CN077269 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xthr35G13 CN110257 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TTbA051k05 CR432338 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7652226 CX814994 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:9010242 EL854447 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8919945 EL833695 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:7545603 CX488061 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:3745342 BE679780 5' X. laevis.S Xenopus laevis oocyte non normalized oocyte NF stage 5 (16-cell) to NF stage 6 (32-cell)
XL416i01ex BP674348 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL424o02ex BP677113 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL446h01ex BP684611 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL404e02ex BP685744 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL463o01ex BP691213 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL477i21ex BP695460 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGE:3742860 BE679642 5' X. laevis.S Xenopus laevis unfertilized egg cDNA library egg unfertilized egg stage
IMAGE:3743507 BE679901 5' X. laevis.S Xenopus laevis unfertilized egg cDNA library egg unfertilized egg stage
IMAGE:3430548 BF611392 5' X. laevis.S Wellcome CRC pcDNAI egg egg unfertilized egg stage
IMAGE:3380251 BE506994 5' X. laevis.S Wellcome CRC pSK animal cap animal cap NF stage 7 to NF stage 9
xlk60c02ex DC035670 5' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk104f04ex DC037010 5' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk107f17ex DC037984 5' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk70c18ex DC057788 5' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk71a14ex DC058069 5' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk8o12ex DC062200 5' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:6933188 CB941314 5' X. laevis.S NICHD_XGC_Tad2 whole organism NF stage 62
xl316j03 DC127964 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
IMAGE:3380251 BE192289 3' X. laevis.S Wellcome CRC pSK animal cap animal cap NF stage 7 to NF stage 9
IMAGE:3743507 BE678944 3' X. laevis.S Xenopus laevis unfertilized egg cDNA library egg unfertilized egg stage
IMAGE:3742860 BE678490 3' X. laevis.S Xenopus laevis unfertilized egg cDNA library egg unfertilized egg stage
rxlk70c18ex DC024366 3' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxlk107f17ex DC005064 3' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxlk104f04ex DC004131 3' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL446h01ex BP720510 3' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
rxlk60c02ex DC002810 3' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL499g03ex BP741709 3' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
rxl272o14 DC080635 3' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15