Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Phenotypes Gene Literature (0) GO Terms (6) Nucleotides (109) Proteins (56) Interactants (22) Wiki
XB-GENEPAGE-1006467

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for tsr3 - Xenopus tropicalis

RefSeq mRNAs(3)
Models - Gene (25)
Models - mRNA (29)
mRNAs (6)
ESTs (8)

RefSeq mRNAs (3)

Accession Version name Length Protein Species
NM_001017135 NM_001017135.2 18S rRNA aminocarboxypropyltransferase 1627 bp NP_001017135 X. tropicalis
XM_031892676 XM_031892676.1 XP_031748536.1 ribosome biogenesis protein TSR3 homolog isoform X2 1507 bp XP_031748536 X. tropicalis
XM_012970449 XM_012970449.2 ribosome biogenesis protein TSR3 homolog isoform X1 1665 bp XP_012825903 X. tropicalis

Models - Gene (25)

Source Version Model Species
NCBI 10.0 XBXT10g005218 X. tropicalis
ENSEMBL 10.0 tsr3 X. tropicalis
Xenbase 9.1 gene4766 X. tropicalis
ENSEMBL 9.1 tsr3 X. tropicalis
JGI 7.1 Xetro.I01162 X. tropicalis
ENSEMBL 4.1 ENSXETG00000021589 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3710030 X. tropicalis
JGI 4.1 e_gw1.371.14.1 X. tropicalis
JGI 4.1 e_gw1.371.2.1 X. tropicalis
JGI 4.1 e_gw1.371.22.1 X. tropicalis
JGI 4.1 gw1.371.14.1 X. tropicalis
JGI 4.1 gw1.371.2.1 X. tropicalis
JGI 4.1 gw1.371.22.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_3710016 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3710002 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3710014 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3710022 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_3710006 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_3710007 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3710031 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_371000008 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_371000006 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_371000007 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_371000030 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_371000031 X. tropicalis

mRNAs based on gene models(29)

Source Version Model Species
NCBI 10.0 mRNA025904 X. tropicalis
ENSEMBL 10.0 ENSXETT00000046647 X. tropicalis
ENSEMBL 10.0 ENSXETT00000113911 X. tropicalis
Xenbase 9.1 rna15551 X. tropicalis
ENSEMBL 9.1 ENSXETT00000046647 X. tropicalis
JGI 7.1 Xetro.I01162.1 X. tropicalis
JGI 7.1 Xetro.I01162.3 X. tropicalis
JGI 7.1 Xetro.I01162.4 X. tropicalis
JGI 7.1 Xetro.I01162.2 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3710030 X. tropicalis
ENSEMBL 4.1 ENSXETT00000046647 X. tropicalis
JGI 4.1 e_gw1.371.14.1 X. tropicalis
JGI 4.1 e_gw1.371.2.1 X. tropicalis
JGI 4.1 e_gw1.371.22.1 X. tropicalis
JGI 4.1 gw1.371.14.1 X. tropicalis
JGI 4.1 gw1.371.2.1 X. tropicalis
JGI 4.1 gw1.371.22.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_3710016 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3710002 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3710014 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3710022 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_3710006 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_3710007 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3710031 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_371000008 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_371000006 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_371000007 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_371000030 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_371000031 X. tropicalis

mRNAs from cDNA libraries (6)

Clone Accession Species Library Anatomy Stage
NM_001017135 X. tropicalis
TEgg001m01 CR761043 X. tropicalis
IMAGE:8916277 BC153688 X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:7558792 BC167337 X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
XM_012970449 X. tropicalis
XM_031892676 X. tropicalis

ESTs (8)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8916277 EL829242 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8856099 EL818648 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8963835 EL661920 5' X. tropicalis NICHD_XGC_tropInt_66 intestine unspecified stage
IMAGE:7558792 CX498279 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:8916277 EL829243 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8856099 EL818649 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:7511726 CX740603 3' X. tropicalis NIH_XGC_tropGas5 whole organism NF stage 10 to NF stage 18
IMAGE:7558792 CX498278 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5