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Summary Expression Phenotypes Gene Literature (2) GO Terms (0) Nucleotides (139) Proteins (77) Interactants (88) Wiki
XB-GENEPAGE-1006199

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for otof - All

RefSeq mRNAs(18)
Models - Gene (37)
Models - mRNA (39)
mRNAs (26)
ESTs (8)

RefSeq mRNAs (18)

Accession Version name Length Protein Species
XM_041565140 XP_041421074.1 otoferlin isoform X2 6385 bp XP_041421074 X. laevis.S
XM_041565141 XP_041421075.1 otoferlin isoform X3 7602 bp XP_041421075 X. laevis.S
XM_041565142 XP_041421076.1 otoferlin isoform X4 6355 bp XP_041421076 X. laevis.S
XM_041565143 XP_041421077.1 otoferlin isoform X5 7570 bp XP_041421077 X. laevis.S
XM_041565144 XP_041421078.1 otoferlin isoform X6 6356 bp XP_041421078 X. laevis.S
XM_041565145 XP_041421079.1 otoferlin isoform X7 6326 bp XP_041421079 X. laevis.S
XM_041565146 XP_041421080.1 otoferlin isoform X8 6294 bp XP_041421080 X. laevis.S
XM_041565147 XP_041421081.1 otoferlin isoform X9 7509 bp XP_041421081 X. laevis.S
XM_041565148 XP_041421082.1 otoferlin isoform X10 5783 bp XP_041421082 X. laevis.S
XM_041565149 XP_041421083.1 otoferlin isoform X11 6326 bp XP_041421083 X. laevis.S
XM_041565150 XP_041421084.1 otoferlin isoform X12 7556 bp XP_041421084 X. laevis.S
XM_041563641 XP_041419575.1 otoferlin isoform X1 6348 bp XP_041419575 X. laevis.L
XM_041563642 XP_041419576.1 otoferlin isoform X2 6348 bp XP_041419576 X. laevis.L
XM_041563643 XP_041419577.1 otoferlin isoform X3 6555 bp XP_041419577 X. laevis.L
XM_041563644 XP_041419578.1 otoferlin isoform X4 6316 bp XP_041419578 X. laevis.L
XM_041563645 XP_041419579.1 otoferlin isoform X5 6524 bp XP_041419579 X. laevis.L
XM_041563646 XP_041419580.1 otoferlin isoform X6 6317 bp XP_041419580 X. laevis.L
XM_041565139 XP_041421073.1 otoferlin isoform X1 6386 bp XP_041421073 X. laevis.S

Models - Gene (37)

Source Version Model Species
NCBI 10.0 XBXT10g010783 X. tropicalis
NCBI 10.1 XBXL10_1g24655 X. laevis.L
NCBI 10.1 XBXL10_1g26348 X. laevis.S
JGI 9.1 Xelaev18028369m.g X. laevis.L
JGI 9.1 Xelaev18030281m.g X. laevis.S
Xenbase 9.1 gene16628 X. tropicalis
Xenbase 9.2 gene43012 X. laevis.L
Xenbase 9.2 gene37963 X. laevis.S
JGI 7.1 Xetro.I02037 X. tropicalis
JGI 6.0 XeXenL6RMv10006185m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000003330 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3470026 X. tropicalis
JGI 4.1 e_gw1.347.1.1 X. tropicalis
JGI 4.1 e_gw1.347.200.1 X. tropicalis
JGI 4.1 e_gw1.347.204.1 X. tropicalis
JGI 4.1 e_gw1.347.281.1 X. tropicalis
JGI 4.1 e_gw1.347.327.1 X. tropicalis
JGI 4.1 e_gw1.347.332.1 X. tropicalis
JGI 4.1 e_gw1.347.337.1 X. tropicalis
JGI 4.1 e_gw1.347.54.1 X. tropicalis
JGI 4.1 e_gw1.347.56.1 X. tropicalis
JGI 4.1 gw1.347.1.1 X. tropicalis
JGI 4.1 gw1.347.200.1 X. tropicalis
JGI 4.1 gw1.347.204.1 X. tropicalis
JGI 4.1 gw1.347.281.1 X. tropicalis
JGI 4.1 gw1.347.327.1 X. tropicalis
JGI 4.1 gw1.347.332.1 X. tropicalis
JGI 4.1 gw1.347.337.1 X. tropicalis
JGI 4.1 gw1.347.54.1 X. tropicalis
JGI 4.1 gw1.347.56.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_3470046 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3470001 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3470281 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3470327 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_3470004 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_347000026 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_347000004 X. tropicalis

mRNAs based on gene models(39)

Source Version Model Species
NCBI 10.0 mRNA053412 X. tropicalis
NCBI 10.1 XBmRNA46047 X. laevis.L
NCBI 10.1 XBmRNA49230 X. laevis.S
JGI 9.1 Xelaev18028369m X. laevis.L
JGI 9.1 Xelaev18030281m X. laevis.S
Xenbase 9.1 rna36369 X. tropicalis
Xenbase 9.2 rna86195 X. laevis.L
Xenbase 9.2 rna78919 X. laevis.S
JGI 7.1 Xetro.I02037.1 X. tropicalis
JGI 6.0 XeXenL6RMv10006185m X. laevis.L
JGI 4.1 estExt_fgenesh1_pg.C_3470026 X. tropicalis
ENSEMBL 4.1 ENSXETT00000007210 X. tropicalis
ENSEMBL 4.1 ENSXETT00000007214 X. tropicalis
ENSEMBL 4.1 ENSXETT00000007211 X. tropicalis
JGI 4.1 e_gw1.347.1.1 X. tropicalis
JGI 4.1 e_gw1.347.200.1 X. tropicalis
JGI 4.1 e_gw1.347.204.1 X. tropicalis
JGI 4.1 e_gw1.347.281.1 X. tropicalis
JGI 4.1 e_gw1.347.327.1 X. tropicalis
JGI 4.1 e_gw1.347.332.1 X. tropicalis
JGI 4.1 e_gw1.347.337.1 X. tropicalis
JGI 4.1 e_gw1.347.54.1 X. tropicalis
JGI 4.1 e_gw1.347.56.1 X. tropicalis
JGI 4.1 gw1.347.1.1 X. tropicalis
JGI 4.1 gw1.347.200.1 X. tropicalis
JGI 4.1 gw1.347.204.1 X. tropicalis
JGI 4.1 gw1.347.281.1 X. tropicalis
JGI 4.1 gw1.347.327.1 X. tropicalis
JGI 4.1 gw1.347.332.1 X. tropicalis
JGI 4.1 gw1.347.337.1 X. tropicalis
JGI 4.1 gw1.347.54.1 X. tropicalis
JGI 4.1 gw1.347.56.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_3470046 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3470001 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3470281 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3470327 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_3470004 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_347000026 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_347000004 X. tropicalis

mRNAs from cDNA libraries (26)

Clone Accession Species Library Anatomy Stage
IMAGE:7661075 BC136162 X. tropicalis NIH_XGC_tropBrn3 brain frog
XM_031901885 X. tropicalis
XM_031901884 X. tropicalis
XM_031901883 X. tropicalis
XM_031901882 X. tropicalis
XM_031901881 X. tropicalis
XM_031901880 X. tropicalis
XR_005961677 X. laevis.S
XM_041565150 X. laevis.S
XM_041565149 X. laevis.S
XM_041565148 X. laevis.S
XM_041565147 X. laevis.S
XM_041565146 X. laevis.S
XM_041565145 X. laevis.S
XM_041565144 X. laevis.S
XM_041565143 X. laevis.S
XM_041565142 X. laevis.S
XM_041565141 X. laevis.S
XM_041565140 X. laevis.S
XM_041565139 X. laevis.S
XM_041563646 X. laevis.L
XM_041563645 X. laevis.L
XM_041563644 X. laevis.L
XM_041563643 X. laevis.L
XM_041563642 X. laevis.L
XM_041563641 X. laevis.L

ESTs (8)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7801127 DR833870 5' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7693654 CX920947 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7661075 CX842217 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7693654 CX920946 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7661075 CX842216 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7801127 DR833869 3' X. tropicalis NIH_XGC_tropFat1 fat body frog
XL190f06 BJ619731 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL190f06 BJ636364 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5